Skip to main content

Advertisement

Log in

The DL1 repeats in the genome of Diphyllobothrium latum

  • Short Communication
  • Published:
Parasitology Research Aims and scope Submit manuscript

Abstract

Diphyllobothrium latum is a widespread intestinal parasite, which has a great clinical relevance, but there are no sequences of its nuclear genome. In this paper, a repetitive element in the D. latum genome is firstly described. The adult D. latum was obtained in the result of expulsion from intestinum of a patient suffering from diphyllobothriasis. Genomic DNA was isolated from several proglottids of this individual. PstI restriction products of D. latum genomic DNA were sequenced. Polymerase chain reaction (PCR) amplification of these products using genomic DNA and selected primers was carried out. Thereby a cluster of a repetitive element, called DL1, was discovered. For precise identification of a beginning and an end of the repeat, a product of PCR amplification of D. latum genomic DNA with one specific primer was sequenced. In discussion, several evidences that DL1 repeat is a member of the SINE family of retroposons were adduced.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Fig. 1
Fig. 2
Fig. 3
Fig. 4

Notes

  1. The nucleotide sequences data reported in this paper have been submitted to GenBank with the accession numbers GQ398237 and GU350458.

References

  • Berriman M, Haas BJ, LoVerde PT, Wilson RA, Dillon GP, Cerqueira GC, Mashiyama ST, Al-Lazikani B, Andrade LF, Ashton PD et al (2009) The genome of the blood fluke Schistosoma mansoni. Nature 460:352–358. doi:10.1038/nature08160

    Article  CAS  PubMed  Google Scholar 

  • Kramerov DA, Vassetzky NS (2005) Short retroposons in eukaryotic genomes. Int Rev Cytol 247:165–221. doi:10.1016/S0074-7696(05)47004-7

    Article  CAS  PubMed  Google Scholar 

  • Laha T, McManus DP, Loukas A, Brindley PJ (2000) Sjalpha elements, short interspersed element–like retroposons bearing a hammerhead ribozyme motif from the genome of the oriental blood fluke Schistosoma japonicum. Biochim Biophys Acta 1492:477–482. doi:10.1016/S0167-4781(00)00112-3

    CAS  PubMed  Google Scholar 

  • Nakao M, Abmed D, Yamasaki H, Ito A (2007) Mitochondrial genomes of the human broad tapeworms Diphyllobothrium latum and Diphyllobothrium nihonkaiense (Cestoda: Diphyllobothriidae). Parasitol Res 101:233–236. doi:10.1007/s00436-006-0433-3

    Article  PubMed  Google Scholar 

  • Perez-Stable C, Shen CK (1986) Competitive and cooperative functioning of the anterior and posterior promoter elements of an Alu family repeat. Mol Cell Biol 6:2041–2052

    CAS  PubMed  Google Scholar 

  • Perez-Stable C, Ayres TM, Shen CK (1984) Distinctive sequence organization and functional programming of an Alu repeat promoter. Proc Natl Acad Sci USA 81:5291–5295

    Article  CAS  PubMed  Google Scholar 

  • Scholz T, Garcia HH, Kuchta R, Wicht B (2009) Update on the human broad tapeworm (genus Diphyllobothrium), including clinical relevance. Clin Microbiol Rev 22:146–160. doi:10.1128/CMR.00033-08

    Article  CAS  PubMed  Google Scholar 

  • Zhou Y, Zheng H, Chen Y, Zhang L, Wang K, Guo J, Huang Z, Zhang B, Huang W, Jin K et al (2009) The Schistosoma japonicum genome reveals features of host-parasite interplay. Nature 460:345–351. doi:10.1038/nature08140

    Article  CAS  Google Scholar 

Download references

Acknowledgments

Research described in this article was supported by the Program of Presidium of the Russian Academy of Sciences “Molecular and Cellular Biology”.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Nadezhda M. Usmanova.

Rights and permissions

Reprints and permissions

About this article

Cite this article

Usmanova, N.M., Kazakov, V.I. The DL1 repeats in the genome of Diphyllobothrium latum . Parasitol Res 107, 449–452 (2010). https://doi.org/10.1007/s00436-010-1889-8

Download citation

  • Received:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s00436-010-1889-8

Keywords

Navigation