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A genetic linkage map of marine shrimp Penaeus (Fenneropenaeus) chinensis based on AFLP, SSR, and RAPD markers

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Abstract

The Chinese shrimp Penaeus (Fenneropaeneus) chinensis is an important species in marine fishery and aquaculture in China. A female Chinese shrimp Penaeus (Fenneropaeneus) chinensis was captured from west coast of the Korean peninsula and mated with a “Yellow Sea No. 1” male to produce the first filial generation (F1) 100 F2 full-sib progeny from brother-sister crosses between F1 families was used for the mapping study. A genetic linkage map of the Chinese shrimp was constructed, based on 354 markers, including 300 amplified fragment length polymorphism (AFLP) markers, 42 microsatellite (SSR) markers, and 12 randomly amplified polymorphism (RAPD) markers. Forty-seven linkage groups (LGs) were identified. The total map length was 4 580.5 cM, with an average spacing of 11.3 cM, covering 75.8% of the estimated genome size. The construction of this genetic linkage map was part of a genetic breeding program. This linkage map will contribute to the discovery of genes and quantitative trait loci (QTLs) in Chinese shrimp.

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Authors and Affiliations

  1. College of Marine Life Sciences, Ocean University of China, Qingdao, 266003, China

    Bo Liu  (刘博)

  2. Yellow Sea Fisheries Research Institute, Chinese Academy of Fishery Sciences, Qingdao, 266071, China

    Bo Liu  (刘博), Qingyin Wang  (王清印), Jian Li  (李健), Ping Liu  (刘萍) & Yuying He  (何玉英)

Authors
  1. Bo Liu  (刘博)
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  2. Qingyin Wang  (王清印)
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  3. Jian Li  (李健)
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  4. Ping Liu  (刘萍)
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  5. Yuying He  (何玉英)
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Corresponding author

Correspondence to Jian Li  (李健).

Additional information

Supported by National Key Technology R&D Program (No. 2006BAD01A13); National Special Research Fund for Nonprofit Sector (Agriculture) (No. nyhyzx07-042); the Earmarked Fund for Modern Agro-industry Technology Research System (No. nycytx-46)

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Liu, B., Wang, Q., Li, J. et al. A genetic linkage map of marine shrimp Penaeus (Fenneropenaeus) chinensis based on AFLP, SSR, and RAPD markers. Chin. J. Ocean. Limnol. 28, 815–825 (2010). https://doi.org/10.1007/s00343-010-9915-3

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  • DOI: https://doi.org/10.1007/s00343-010-9915-3

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