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Spatial genetic patterns in lagoonal, reef-slope and island populations of the coral Platygyra daedalea in Kenya and Tanzania

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Abstract

Considering the rapid degradation of coral reefs, it is becoming increasingly important to assess factors such as levels of intraspecific genetic diversity and degree of connectivity between populations and reefs. In this study, five DNA microsatellite markers were used to infer migration patterns and levels of genetic diversity in ten populations of the faviid coral Platygyra daedalea along the coast of East Africa. Populations from reef-slopes and offshore islands had significantly greater genetic diversity, measured as expected heterozygosity and allelic richness than those of inshore lagoonal reefs. A combination of F-statistics and individual assignment tests indicated moderate to high levels of gene flow among lagoonal populations, and less migration between lagoonal sites and the reef-slope and island sites. These results suggest that reef-slope and island reefs could be important reservoirs of genetic diversity for this coral species.

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References

  • Ayre DJ, Duffy S (1994) Evidence for restricted gene flow in the viviparous coral Seriatopora hystrix on Australia’s Great Barrier Reef. Evolution 48:1183–1201

    Article  Google Scholar 

  • Ayre DJ, Hughes TP (2000) Genotypic diversity and gene flow in brooding and spawning corals along the Great Barrier Reef, Australia. Evolution 54:1590–1605

    PubMed  CAS  Google Scholar 

  • Ayre DJ, Hughes TP (2004) Climate change, genotypic diversity and gene flow in reef-building corals. Ecol Lett 7:273–278

    Article  Google Scholar 

  • Ayre DJ, Hughes TP, Standish RJ (1997) Genetic differentiation, reproductive mode, and gene flow in the brooding coral Pocillopora damicornis along the Great Barrier Reef, Australia. Mar Ecol Prog Ser 159:175–187

    Article  Google Scholar 

  • Benzie JAH, Haskell A, Lehman H (1995) Variation in the genetic composition of coral (Pocillopora damicornis and Acropora palifera) populations from different reef habitats. Mar Biol 121:731–739

    Article  Google Scholar 

  • Cockerham CC, Weir BS (1984) Covariances of relatives stemming from a population undergoing mixed self and random mating. Biometrics 40:157–164

    Article  PubMed  CAS  Google Scholar 

  • El Mousadik A, Petit RJ (1996) High level of genetic differentiation for allelic richness among populations of the argan tree [Argania spinosa (L) Skeels] endemic to Morocco. Theor Appl Genet 92:832–839

    Article  Google Scholar 

  • Felsenstein J (1989) PHYLIP 3.2—Phylogeny inference package. Cladistics 5:166

    Google Scholar 

  • Goreau T, McClanahan T, Hayes R, Strong A (2000) Conservation of coral reefs after the 1998 global bleaching event. Conserv Biol 14:5–15

    Article  Google Scholar 

  • Goudet J (1995) Fstat (version 1.2); a computer programme to calculate F-statistics. J Hered 86:485–486

    Google Scholar 

  • Ivey CT, Richards JH (2001) Genotypic diversity and clonal structure of everglades sawgrass, Cladium jamaicense (Cyperaceae). Int J Plant Sci 162:1327–1335

    Article  Google Scholar 

  • Magalon H, Adjeroud M, Veuille M (2004) Patterns of genetic variation do not correlate with geographical distance in the reef-building coral Pocillopora meandrina in the South Pacific. Mol Ecol 14:1861–1868

    Article  Google Scholar 

  • McClanahan T, Obura D (1987) Sedimentation effects on shallow coral communities in Kenya. J Exp Mar Biol Ecol 209:103–122

    Article  Google Scholar 

  • McClanahan T, Baird AH, Marshall PA, Toscano MA (2004) Comparing bleaching and mortality responses of hard corals between southern Kenya and the Great Barrier Reef, Australia. Mar Pollut Bul 48:327–335

    Article  CAS  Google Scholar 

  • Mangubhai S, Harrison PL (2006) Seasonal patterns of coral reproduction on equatorial reefs in Mombasa, Kenya. Proc 10th Int Coral Reef Symp 1:106–114

    Google Scholar 

  • Mangubhai S, Souter P, Grahn M (2007) Phenotypic variation in the coral Platygyra daedalea in Kenya: morphometry and genetics. Mar Ecol Prog Ser 345:105–115

    Article  CAS  Google Scholar 

  • Miller KJ, Benzie JAH (1997) No clear genetic distinction between morphological species within the coral genus Platygyra. Bull Mar Sci 61:907–917

    Google Scholar 

  • Miller KJ, Howard CG (2004) Isolation of microsatellites from two species of scleractinian coral. Mol Ecol Notes 4:11–13

    Article  CAS  Google Scholar 

  • Ng WC, Morton B (2003) Genetic structure of the scleractinian coral Platygyra sinensis in Hong Kong. Mar Biol 143:963–968

    Article  Google Scholar 

  • Palumbi SR (2004) Marine reserves and ocean neighborhoods: the spatial scale of marine populations and their management. Annu Rev Environ Resour 29:31–68

    Article  Google Scholar 

  • Paetkau D, Slade R, Burden M, Estoup A (2004) Direct, real-time estimation of migration rate using assignment methods: a simulation-based exploration of accuracy and power. Mol Ecol 13:55–65

    Article  PubMed  CAS  Google Scholar 

  • Piry S, Alapetite A, Cornuet JM, Paetkau D, Baudouin L, Estoup A (2004) GeneClass2: a software for genetic assignment and first-generation migrant detection. J Hered 95:536–539

    Article  PubMed  CAS  Google Scholar 

  • Pritchard JK, Stephens M, Donnelly P (2000) Inference of population structure using multilocus genotype data. Genetics 155:945–959

    PubMed  CAS  Google Scholar 

  • Rannala B, Mountain JL (1997) Detecting immigration by using multilocus genotypes. Proc Natl Acad Sci USA 64:9197–9201

    Article  Google Scholar 

  • Raymond M, Rousset F (1995) An exact test for population differentiation. Evolution 49:1280–1283

    Article  Google Scholar 

  • Ridgway T, Hoegh-Guldberg O, Ayre DJ (2001) Panmixia in Pocillopora verrucosa from South Africa. Mar Biol 139:175–181

    Article  CAS  Google Scholar 

  • Stoddart JA (1984) Genetic differentiation amongst populations of the coral Pocillopora damicornis off Southwestern Australia. Coral Reefs 3:149–156

    Article  Google Scholar 

  • Underwood JN, Smith LD, van Oppen MJH, Gilmour JP (2007) Multiple scales of genetic connectivity in a brooding coral on isolated reefs following catastrophic bleaching. Mol Ecol 16:771–784

    Article  PubMed  CAS  Google Scholar 

  • van Oosterhout C, Hutchinson WF, Wills DPM, Shipley P (2004) MICRO-CHECKER: software for identifying and correcting genotyping errors in microsatellite data. Mol Ecol Notes 4:535–538

    Article  Google Scholar 

  • Veron J (2000) Corals of the world. Australian Institute of Marine Science, Townsville

    Google Scholar 

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Acknowledgments

This study was funded by the Swedish development cooperation agency, Sida and undertaken with permits from the Kenya Wildlife Service and Mafia Island Marine National Park. Logistical support was provided by CORDIO-EA and the Institute of Marine Science at the University of Dar es Salaam. The map was created by B. Munywoki, at CORDIO-EA. O. Henriksson and N. Olsson provided valuable assistance. The manuscript benefited from comments made by D. Souter and three anonymous reviewers.

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Correspondence to P. Souter.

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Communicated by Biology Editor M. van Oppen.

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Souter, P., Grahn, M. Spatial genetic patterns in lagoonal, reef-slope and island populations of the coral Platygyra daedalea in Kenya and Tanzania. Coral Reefs 27, 433–439 (2008). https://doi.org/10.1007/s00338-007-0342-7

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  • DOI: https://doi.org/10.1007/s00338-007-0342-7

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