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Development of a gene-based radiation hybrid map of chicken Chromosome 7 and comparison to human and mouse

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Abstract

To validate the ChickRH6 whole-genome radiation hybrid (WGRH) panel, we constructed a map of chicken Chromosome 7 based on 19 microsatellite markers from the genetic map and 76 ESTs (expressed sequence tags), whose efficient targeted development was made possible by using the ICCARE software. This high-density radiation hybrid (RH) map of a chicken macrochromosome gives us indications on characteristics of ChickRH6. The potential resolution of the panel is 325 kb and the practical resolution of our framework map is 1.3 Mb. Based on these results, a complete framework map of the chicken genome would comprise 1000 markers. The marker order is in good agreement with the genetic map and comparison with the human and mouse sequence maps revealed a number of internal rearrangements.

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Acknowledgments

We would like to thank F. Spitz (Department of Zoology and Animal Biology and NCCR Frontiers in Genetics, University of Geneva, Switzerland), who provided primers for five genes used in this study. This work was supported by funds from the Génopôle Toulouse Midi-Pyrénées and INRA–AGENA.

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  1. Carine Genet

    Present address: Différenciation Cellulaire et croissance, ENSAM–INRA, 2 Place Pierre Viala — 34060 Montpellier cedex 1, France

Authors and Affiliations

  1. Laboratoire de Génétique Cellulaire, INRA, Chemin de Borde Rouge, 31326, Castanet–Tolosan, France

    Mireille Morisson, Carine Jiguet–Jiglaire, Sophie Leroux, Thomas Faraut, Suzanne Bardes, Katia Feve, Carine Genet, Frédérique Pitel, Denis Milan & Alain Vignal

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  1. Mireille Morisson
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  3. Sophie Leroux
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Correspondence to Mireille Morisson.

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Morisson, M., Jiguet–Jiglaire, C., Leroux, S. et al. Development of a gene-based radiation hybrid map of chicken Chromosome 7 and comparison to human and mouse. Mamm Genome 15, 732–739 (2004). https://doi.org/10.1007/s00335-004-3003-y

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  • DOI: https://doi.org/10.1007/s00335-004-3003-y

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