Abstract
Two dimensional gel electrophoresis combined with matrix-assisted laser desorption ionization time-of-flight mass spectrometry (MALDI-TOF MS) was employed to study the somatic embryogenesis (SE) in Valencia sweet orange (Citrus sinensis Osbeck). Twenty-four differentially expressed proteins were identified at five time points of citrus SE (0, 1, 2, 3, 4 weeks after embryo initiation) covering globular, heart/torpedo and cotyledon-shaped embryo stages. The general expression patterns for these proteins were consistent with those appeared at 4 weeks of citrus SE. The most striking feature of our study was that five proteins were predicted to be involved in glutathione (GSH) metabolism and anti-oxidative stress, and they exhibited different expression patterns during SE. Based on that oxidative stress has been validated to enhance SE, the preferential representation for anti-oxidative proteins suggests that they could have a developmental role in citrus SE. Some proteins involved in cell division, photosynthesis and detoxification were also identified, and their possible roles in citrus SE were discussed.
Similar content being viewed by others
Abbreviations
- 2-DE:
-
Two-dimensional gel electrophoresis
- ACN:
-
Acetonitril
- CBB:
-
Coomassie brilliant blue
- CHAPS:
-
3-[(3-Cholamidopropyl)dimethylammonio]propanesulfonic acid
- DTT:
-
dl-Dithiothreitol
- EST:
-
Expressed sequence tag
- GSH:
-
Glutathione
- GST:
-
Glutathione-S-transferase
- MALDI-TOF:
-
Matrix-assisted laser desorption ionization time-of-flight
- MS:
-
Mass spectrum
- PEBP:
-
Phosphatidylethanolamine-binding family protein
- PHGPx:
-
Phospholipid hydroperoxide glutathione peroxidase
- ROS:
-
Reactive oxygen species
- SE:
-
Somatic embryogenesis
- TFA:
-
Trifluoroacetic acid
References
Baldwin TC, Domingo C, Schindler T, Seetharaman G, Stacey N, Roberts K (2001) DcAGP1, a secreted arabinogalactan protein, is related to a family of basic proline-rich proteins. Plant Mol Biol 45:421–435
Beeor-Tzahar T, Ben-Hayyim G, Holland D, Faltin Z, Eshdat Y (1995) A stress-associated citrus protein is a distinct plant phospholipids hydroperoxide glutathione peroxidase. FEBS Lett 366:151–155
Boutilier K, Offringa R, Sharma VK, Kieft H, Ouellet T, Zhang LM, Hattori J, Liu CM, van Lammeren AAM, Miki BLA et al (2002) Ectopic expression of BABY BOOM triggers a conversion from vegetative to embryonic growth. Plant Cell 14:1737–1749
Caliskan M, Turet M, Cuming AC (2004) Formation of wheat (Triticum aestivum L.) embryogenic callus involves peroxidegenerating germin-like oxalate oxidase. Planta 219:132–140
Chen SX, Harmon AC (2006) Advances in plant proteomics. Proteomics 6:5504–5516
Chugh A, Khurana P (2002) Gene expression during somatic embryogenesis-recent advances. Curr Sci 86:715–730
Cyr RJ, Bustos MM, Guiltinan MJ, Fosket DE (1987) Developmental modulation of tubulin protein and mRNA levels during somatic embryogenesis in cultured carrot cells. Planta 171:365–376
Dai SJ, Chen TT, Chong K, Xue YB, Liu SQ, Wang T (2007) Proteomic identification of differentially expressed proteins associated with pollen germination and tube growth reveals characteristics of germinated Oryza sativa pollen. Mol Cell Proteomics 6:207–230
Depege N, Drevet J, Boyer N (1998) Molecular cloning and characterization of tomato cDNAs encoding glutathione peroxidase-like proteins. Eur J Biochem 253:445–451
Dixon DP, Davis BG, Edwards R (2002) Functional divergence in the glutathione transferase superfamily in plants. J Biol Chem 277:30859–30869
Edward JV, Helen LM, Ramachandran K, Ishita C, Bernard AK (1998) DNA repair in higher plants. Mutat Res 400:187–200
Fehér A, Pasternak TP, Dudits D (2003) Transition of somatic plant cells to an embryogenic state. Plant Cell Tissue Organ Cult 74:201–228
Francesco C, Maria CT, Fabio DP, Francesco GC (1998) Somatic embryogenesis and plant regeneration from undeveloped ovules and stigma/style explants of sweet orange navel group [Citrus sinensis (L.) Osb]. Plant Cell Tissue Organ Cult 54:183–189
Ganesan M, Jayabalan N (2004) Evaluation of haemoglobin (erythrogen): for improved somatic embryogenesis and plant regeneration in cotton (Gossypium hirsutum L. cv. SVPR 2). Plant Cell Rep 23:181–187
Giovanni C, Maurizio B, Luca M, Laura S, Gian Marco G, Barbara C, Paola O, Luciano Z, Pier GR (2004) Blue silver: a very sensitive colloidal coomassie G-250 staining for proteome analysis. Electrophoresis 25(9):1327–1333
Hirotaka I, Fumi H, Taro S, Kanae S, Yumi M, Makoto S, Takeo K, Michiko H, Kazunori H, Yasuhito N (2003) Early embryonic lethality caused by targeted disruption of the mouse PHGPx gene. Biochem Biophys Res Commun 305:278–286
Holland D, Ben-Hayyim G, Faltin Z, Camoin L, Strosberg AD, Eshdat Y (1993) Molecular characterization of salt-stress-associated protein in citrus: protein and cDNA sequence homology to mammalian glutathione peroxidases. Plant Mol Biol 21:923–927
Imin N, De Jong F, Mathesius U, van Noorden G, Saeed NA, Wang X, Rose RJ, Rolfe BG (2004) Proteome reference maps of Medicago truncatula embryogenic cell cultures generated from single protoplasts. Proteomics 4:1883–1896
Imin N, Nizamidin M, Daniher D, Nolan KE, Rose RJ, Rolfe BG (2005) Proteomic analysis of somatic embryogenesis in Medicago truncatula. Explant cultures grown under 6-benzylaminopurine and 1-naphthaleneacetic acid treatments. Plant Physiol 137:1250–1260
Irena S, Renata B (2006) Cyanide action in plants—from toxic to regulatory. Acta Physiol Plant 28:483–497
Jean-Michel P, Jean-François B, Stephane L (2001) Structure and differential expression of the four members of the Arabidopsis thaliana ferritin gene family. Biochem J 359:575–582
Kathleen AM (1996) The functions and regulation of glutathione S-transferases in plants. Annu Rev Plant Physiol Mol Biol 47:127–158
Kevers C, Gal NL, Monteiro M, Dommes J, Gaspar T (2000) Somatic embryogenesis of Panax ginseng in liquid cultures: a role for polyamines and their metabolic pathways. Plant Growth Regul 31:209–214
Kumar PP, Joy RW IV, Thorpe TA (1989) Ethylene and carbon dioxide accumulation and growth of cell suspension cultures of Picea glauca (white spruce). J Plant Physiol 135:592–596
Levine A, Tenhaken R, Dixon R, Lamb C (1994) H2O2 from oxidative burst orchestrates the plant hypersensitive disease resistance response. Cell 79:583–593
Lippert D, Zhuang J, Ralph S, Ellis DE, Gilbert M, Olafson R, Ritland K, Ellis B, Douglas CJ, Bohlmann J (2005) Proteome analysis of early somatic embryogenesis in Picea glauca. Proteomics 5:461–473
Liu JH, Deng XX (2002) Regeneration and analysis of citrus interspecific mixoploid hybrid plants from asymmetric somatic hybridization. Euphytica 125:13–20
Liu HY, Xiao LT, Lu XD, Hu JJ, Wu S, He CZ, Deng XX (2005) Changes in polyamine levels in Citrus sinensis Osb. cv. Valencia callus during somatic embryogenesis. J Plant Physiol Mol Biol 31(3):275–280
Lobreaux S, Briat JF (1996) Ferritin accumulation and degradation in different organs of pea during development. Biochem J 274:601–606
Luo JP, Jiang ST, Pan LJ (2001) Enhanced somatic embryogenesis by salicylic acid of Astralagus adsurgens Pall.: relationship with H2O2 production and H2O2 metabolizing enzyme activities. Plant Sci 161:125–132
Mária D, Gábor VH, Sholpan D, Katalin T, László S, Imre V, Balázs B, Zoltán K, Dénes D (1999) Plants ectopically expressing the iron-binding protein, ferritin, are tolerant to oxidative damage and pathogens. Nat Biotechnol 17:192–196
May MJ, Vernoux T, Leaver C, Van Montagu M, Inze D (1998) Glutathione homeostasis in plants: implications for environmental sensing and plant development. J Exp Bot 49:649–667
Meinke DW (1992) A homoeotic mutant of Arabidopsis thaliana with leafy cotyledons. Science 258:1647–1650
Milena M, Marcella B, Luca E, Bhakti P, Alfredo SN, Candida V (2008) Proteomic analysis of somatic embryogenesis in Vitis vinifera. Plant Cell Rep 27:347–356
Minocha R, Minocha SC, Long S (2004) Polyamines and their biosynthetic enzymes during somatic embryo development in red spruce (Picea rubens Sarg.). In Vitro Cell Dev Plant 40:572–580
Mukaddes K, Kemal NK (2006) The effects of some carbohydrates on growth and somatic embryogenesis in citrus callus culture. Sci Hortic 109:29–34
Murashige T, Tucker DPH (1969) Growth factors requirement of citrus tissue cultures. In: Chapman HD (ed) Proceedings of the International Citrus Symposium, vol 3. Riverside, California, pp 1155–1161
Pasternak T, Prinsen E, Ayaydin F, Miskolczi P, Potters G, Asard H, van Onckelen H, Dudits D, Fehe′r A (2002) The role of auxin, pH and stress in the activation of embryogenic cell division in leaf protoplast-derived cells of alfalfa (Medicago sativa L.). Plant Physiol 129:1807–1819
Pauline MH, Paolo A (1996) The ferritins’ molecular properties, iron storage function and cellular regulation. Biochim Biophys Acta 1275:161–203
Phyllis AD (2007) Effects of oxidative stress on embryonic development. Birth Defects Res C Embryo Today 81:155–162
Ragland M, Theil EC (1993) Ferritin and iron concentration during soybean nodule development. Plant Mol Biol 21:555–560
Rakesh M, Dale RS, Cathie R, Kevin DS, Subhash CM (1999) Polyamine levels during the development of zygotic and somatic embryos of Pinus radiate. Physiol Plant 105:155–164
Saidu Y (2004) Physicochemical features of rhodanese: a review. Afr J Biotech 3:370–374
Schmidt EDL, Guzzo F, Toonen MAJ, Devries SC (1997) A leucine-rich repeat containing receptor-like kinase marks somatic plant cells competent to form embryos. Development 124:2049–2062
Smith J, Urbanska KM (1986) Rhodanese Activity in Lotus corniculatus sensu-lato. J Nat Histol 20:1467–1476
Stasolla C, Yeung EC (2003) Recent advances in conifer somatic embryogenesis: improving somatic embryo quality. Plant Cell Tissue Organ Cult 74:15–35
Stasolla C, Bozhkov PV, Chu TM, van Zyl L, Egertsdotter U, Suarez MF, Craig D, Wolfinger RD, von Arnold S, Sederoff RR (2004) Variation in transcript abundance during somatic embryogenesis in gymnosperms. Tree Physiol 24:1073–1085
Stefania F, Fabio DP, Francesco C, Maurizio S (2002) Effect of 2, 4-DD and 4-CPPU on somatic embryogenesis from stigma and style transverse thin cell layers of Citrus. Plant Cell Tissue Organ Cult 68:57–63
Thibaud-Nissen F, Shealy RT, Khanna A, Vodkin LO (2003) Clustering of Microarray data reveals transcript patterns associated with somatic embryogenesis in soybean. Plant Physiol 132:118–136
Winkelmann T, Heintz D, Dorsselaer AV, Serek M, Braun HP (2006) Proteomic analyses of somatic and zygotic embryos of Cyclamen persicum Mill. reveal new insights into seed and germination physiology. Planta 224:508–519
Wu XB, Wang J, Liu JH, Deng XX (2008) Involvement of polyamine biosynthesis in somatic embryogenesis of Valencia sweet orange (Citrus sinensis) induced by glycerol. J Plant Physiol. doi:10.1016/j.jplph.2008.02.005
Zimmerman JL (1993) Somatic embryogenesis: a model for early development in higher plant. Plant Cell 5:1411–1423
Zuo JR, Niu QW, Frugis G, Chua NH (2002) The WUSCHEL gene promotes vegetative-to-embryonic transition in Arabidopsis. Plant J 30:349–359
Acknowledgments
We thank Prof. S. Xiao and Dr. Q. Xu for their critical review of the manuscript. We also thank Shanghai Applied Protein Technology Co. Ltd for the technology support. The research was financially supported by the National Natural Science Foundation of China (No. 30570973, 30830078) and the Ministry of Education of China (IRT0548).
Author information
Authors and Affiliations
Corresponding author
Additional information
Communicated by P. Lakshmanan.
Rights and permissions
About this article
Cite this article
Pan, Z., Guan, R., Zhu, S. et al. Proteomic analysis of somatic embryogenesis in Valencia sweet orange (Citrus sinensis Osbeck). Plant Cell Rep 28, 281–289 (2009). https://doi.org/10.1007/s00299-008-0633-7
Received:
Revised:
Accepted:
Published:
Issue Date:
DOI: https://doi.org/10.1007/s00299-008-0633-7