Abstract
Four Gram-negative strains (ML4T, ML19, ML31, ML32) of nonmotile, appendaged, budding bacteria were isolated from the meromictic Mahoney Lake in British Columbia, Canada. The strains were red to brown-red in color and produced bacteriochlorophyll a incorporated into photosynthetic pigment-protein complexes. Phylogenetic analysis has placed these strains within the class Alphaproteobacteria, with the closest relatives being members of the genera Erythrobacter, Porphyrobacter, and Erythromicrobium. Morphological features warrant their inclusion within the genus Porphyrobacter and these strains can be readily distinguished from other species of this genus on the basis of a mesophilic temperature range, a broad pH range, and tolerance to extremely high NaCl and Na2SO4 concentrations, in keeping with the environment from which they were isolated, a Na2SO4-dominated meromictic lake. These isolates utilize a variety of organic substrates for aerobic chemoheterotrophic growth and do not grow under anaerobic conditions, in either the presence or the absence of light. All strains require vitamin B12, and strains ML4T and ML19 require biotin. The DNA G + C contents ranged from 62.2 to 64.9 mol%. Phenotypic and phyletic data support the classification of strains ML4T, ML19, ML31, and ML32 as a novel Porphyrobacter species for which the name Porphyrobacter meromictius sp. nov. is proposed.
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Literature Cited
Chung WK, King GM (2001) Isolation, characterization, and polyaromatic hydrocarbon degradation potential of aerobic bacteria from marine macrofaunal burrow sediments and description of Lutibacterium anuloederans gen. nov., sp. nov., and Cycloclasticus spirillensus sp. nov. Appl Env Microbiol 67:5585–5592
Denner EBM, Vybiral D, Koblizek M, Kampfer P, Busse H-J, Velimirov B (2002) Erythrobacter citreus sp. nov., a yellow-pigmented bacterium that lacks bacteriochlorophyll a, isolated from the western Mediterranean Sea. Int J Syst Evol Microbiol 52:1655–1661
De Soete G (1983) A least squares algorithm for fitting additive trees to proximity data. Psychometrika 48:621–626
Felsenstein J (1993) PHYLIP (phylogeny inference package), version 3.5.1. Department of Genetics, University of Washington, Seattle
Fuerst JA, Hawkins JA, Holmes A, Sly LI, Moore CJ, Stackebrandt E (1993) Porphyrobacter neustonensis gen. nov., sp. nov., an aerobic bacteriochlorophyll-synthesizing budding bacterium from fresh water. Int J Syst Bacteriol 43:125–134
Hall KJ, Northcote TG (1986) Conductivity-temperature standardization and dissolved solids estimation in a meromictic saline lake. Can J Fish Aquat Sci 43:2450–2454
Hanada S, Kawase Y, Hiraishi A, Takaichi S, Matsuura K, Shimada K, Nagashima KVP (1997) Porphyrobacter tepidarius sp. nov., a moderately thermophilic aerobic photosynthetic bacterium isolated from a hot spring. Int J Syst Bacteriol 47:408–413
Hiraishi A, Yonemitsu Y, Matsushita M, Shin YK, Kuraishi H, Kawahara K (2002) Characterization of Porphyrobacter sanguineus sp. nov., an aerobic bacteriochlorophyll-containing bacterium capable of degrading biphenyl and dibenzofuran. Arch Microbiol 178:45–52
Imhoff JF (1988) Anoxygenic phototrophic bacteria. In: Austin B (ed) Methods in aquatic bacteriology. John Wiley and Sons, New York, pp 207–240
Maidak BL, Olsen GJ, Larsen N, Overbeek R, McCaughey MJ, Woese CR (1996) The Ribosomal Database Project (RDP). Nucleic Acids Res 24:82–85
Mesbah M, Whitman WB (1989) Measurement of deoxyguanosine/thymidine ratios in complex mixtures by high-performance liquid chromatography for determination of the mole percentage guanine + cytosine of DNA. J Chromatogr 479:297–306
Northcote TG, Halsey TG (1969) Seasonal changes in the limnology of some meromictic lakes in southern British Columbia. J Fish Res Board Can 26:1763–1787
Rainey FA, Ward-Rainey N, Kroppenstedt RM, Stackebrandt E (1996) The genus Nocardiopsis represents a phylogenetically coherent taxon and a distinct actinomycete lineage: proposal of Nocardiopsaceae fam. nov. Int J Syst Bacteriol 46:1088–1092
Rainey FA, Silva J, Nobre MF, Silva MT, da Costa MS (2003) Porphyrobacter cryptus sp. nov., a novel slightly thermophilic, aerobic, bacteriochlorophyll a-containing species. Int J Syst Evol Microbiol 53:35–41
Rathgeber C, Beatty JT, Yurkov V (2004) Aerobic phototrophic bacteria: new evidence for the diversity, ecological importance and applied potential of this previously overlooked group. Photosynth Res 81:113–128
Rathgeber C, Yurkova N, Stackebrandt E, Schumann P, Beatty JT, Yurkov V (2005) Roseicyclus mahoneyensis gen. nov., sp. nov., an aerobic phototrophic bacterium isolated from a meromictic lake. Int J Syst Evol Microbiol 55:1597–1603
Shiba T, Simidu U (1982) Erythrobacter longus gen. nov., sp. nov., an aerobic bacterium which contains bacteriochlorophyll a. Int J Syst Bacteriol 32:211–217
Tamaoka J, Komagata K (1984) Determination of DNA base composition by reversed-phase high-performance liquid chromatography. FEMS Microbiol Lett 25:125–128
Yoon J-H, Kang KH, Oh T-K, Park Y-H (2004a) Erythrobacter aquimaris sp. nov., isolated from sea water of a tidal flat of the Yellow Sea in Korea. Int J Syst Evol Microbiol 54:1981–1985
Yoon J-H, Lee M-H, Oh T-K (2004b) Porphyrobacter donghaensis sp. nov., isolated from sea water of the East Sea in Korea. Int J Syst Evol Microbiol 54:2231–2235
Yurkov V, Beatty JT (1998) Aerobic anoxygenic phototrophic bacteria. Microbiol Mol Biol Rev 62:695–724
Yurkov VV, Csotonyi JT (2003) Aerobic anoxygenic phototrophs and heavy metalloid reducers from extreme environments. In: Pandalai SG (ed) Recent research developments in bacteriology. Transworld Research Network, Trivandrum, India, pp 247–300
Yurkov V, van Gemerden H (1993) Abundance and salt tolerance of obligately aerobic, phototrophic bacteria in a microbial mat. Neth J Sea Res 31:57–62
Yurkov V, Stackebrandt E, Holmes A, Fuerst JA, Hugenholtz P, Golecki J, Gad’on N, Gorlenko VM, Kompantseva EI, Drews G (1994) Phylogenetic positions of novel aerobic, bacteriochlorophyll a containing bacteria and description of Roseococcus thiosulfatophilus gen. nov., sp. nov., and Erythrobacter litoralis sp. nov. Int J Syst Bacteriol 44:427–434
Yurkova N, Rathgeber C, Swiderski J, Stackebrandt E, Beatty JT, Hall KJ, Yurkov V (2002) Diversity, distribution and physiology of the aerobic phototrophic bacteria in the mixolimnion of a meromictic lake. FEMS Microbiol Ecol 40:191–204
Acknowledgments
This research was funded by grants from the NSERC (Canada) to V.Y. and J.T.B. We thank K. J. Hall and T. G. Northcote for collection of samples from Mahoney Lake and H. G. Trüper for assistance with the nomenclature.
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The EMBL accession numbers for the 16S rRNA gene sequences of strains ML4T, ML19, and ML31 are AM271004, AM271002, and AM271003, respectively.
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Rathgeber, C., Yurkova, N., Stackebrandt, E. et al. Porphyrobacter meromictius sp. nov., an Appendaged Bacterium, That Produces Bacteriochlorophyll a. Curr Microbiol 55, 356–361 (2007). https://doi.org/10.1007/s00284-007-0275-y
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DOI: https://doi.org/10.1007/s00284-007-0275-y