Abstract
Escherichia coli is the workhorse for gene cloning and production of soluble recombinant proteins in both biotechnological and biomedical industries. The bacterium is also a good producer of several classes of protein-based self-assembling materials such as inclusion bodies (IBs). Apart from being a relatively pure source of protein for in vitro refolding, IBs are under exploration as functional, protein-releasing materials in regenerative medicine and protein replacement therapies. Endotoxin removal is a critical step for downstream applications of therapeutic proteins. The same holds true for IBs as they are often highly contaminated with cell-wall components of the host cells. Here, we have investigated the production of IBs in a recently developed endotoxin-free E. coli strain. The characterization of IBs revealed this mutant as a very useful cell factory for the production of functional endotoxin-free IBs that are suitable for the use at biological interfaces without inducing endotoxic responses in human immune cells.
Similar content being viewed by others
References
Badtke MP, Hammer ND, Chapman MR (2009) Sci Signal 2:e43
Cano-Garrido O, Rodriguez-Carmona E, Díez-Gil C, Vazquez E, Elizondo E, Cubarsi R, Seras-Franzoso J, Corchero JL, Rinas U, Ratera I, Ventosa N, Veciana J, Villaverde A, Garcia-Fruitos E (2013) Acta Biomater 9:6134–6142
Chen GQ (2012) Microb Cell Fact 11:111
Corchero JL, Gasser B, Resina D, Smith W, Parrilli E, Vazquez F, Abasolo I, Giuliani M, Jantti J, Ferrer P, Saloheimo M, Mattanovich D, Schwartz S Jr, Tutino L, Villaverde A (2013) Biotechnol Adv 31:140–153
Diez-Gil C, Krabbenborg S, Garcia-Fruitos E, Vazquez E, Rodriguez-Carmona E, Ratera I, Ventosa N, Seras-Franzoso J, Cano-Garrido O, Ferrer-Miralles N, Villaverde A, Veciana J (2010) Biomaterials 31:5805–5812
Erridge C, Bennett-Guerrero E, Poxton IR (2002) Microbes Infect 4:837–851
Ferrer-Miralles N, Villaverde A (2013) Microb Cell Fact 12:113
Ferrer-Miralles N, Domingo-Espin J, Corchero JL, Vazquez E, Villaverde A (2009) Microb Cell Fact 8:17
Garcia-Fruitos E, Villaverde A (2010) Korean J Chem Eng 27:385–389
Garcia-Fruitos E, Gonzalez-Montalban N, Morell M, Vera A, Ferraz RM, Aris A, Ventura S, Villaverde A (2005) Microb Cell Fact 4:27
Garcia-Fruitos E, Martinez-Alonso M, Gonzalez-Montalban N, Valli M, Mattanovich D, Villaverde A (2007) J Mol Biol 374:195–205
García-Fruitós E, Rodríguez-Carmona E, Díez-Gil C, Ferraz RM, Vázquez E, Corchero JL, Cano-Sarabia M, Ratera I, Ventosa N, Veciana J, Villaverde A (2009) Adv Mater 21:4249–4253
Garcia-Fruitos E, Seras-Franzoso J, Vazquez E, Villaverde A (2010) Nanotechnology 21:205101
Garcia-Fruitos E, Vazquez E, Díez-Gil C, Corchero JL, Seras-Franzoso J, Ratera I, Veciana J, Villaverde A (2012) Trends Biotechnol 30:65–70
Georgiou G, Valax P (1999) Methods Enzymol 309:48–58
Gonzalez-Montalban N, Garcia-Fruitos E, Villaverde A (2007) Nat Biotechnol 25:718–720
J.Sambrook, EF.Fritsch and T.Maniatis. (1989). Molecular cloning, a laboratory manual. New York
Laemmli UK (1970) Nature 227:680
Lee SY, Mattanovich D, Villaverde A (2012) Microb Cell Fact 11:156
Liovic M, Ozir M, Bedina ZA, Peternel S, Komel R, Zupancic T (2012) Microb Cell Fact 11:67
Liu S, Tobias R, McClure S, Styba G, Shi Q, Jackowski G (1997) Clin Biochem 30:455–463
Magalhaes PO, Lopes AM, Mazzola PG, Rangel-Yagui C, Penna TC, Pessoa A Jr (2007) J Pharm Pharm Sci 10:388–404
Maji SK, Perrin MH, Sawaya MR, Jessberger S, Vadodaria K, Rissman RA, Singru PS, Nilsson KP, Simon R, Schubert D, Eisenberg D, Rivier J, Sawchenko P, Vale W, Riek R (2009) Science 325:328–332
Mamat U, Meredith TC, Aggarwal P, Kuhl A, Kirchhoff P, Lindner B, Hanuszkiewicz A, Sun J, Holst O, Woodard RW (2008) Mol Microbiol 67:633–648
Mankar S, Anoop A, Sen S, Maji SK (2011) Nano Rev 2:10
Margreiter G, Messner P, Caldwell KD, Bayer K (2008) J Biotechnol 138:67–73
Neubauer P, Fahnert B, Lilie h and Villaverde A. (2006). pp. 237-292.
Neus Ferrer-Miralles, Escarlata Rodriguez-Carmona, Jose Luis Corchero, Elena Garcia-Fruitos, Esther Vazquez and Antonio Villaverde. (2013). Crit Rev Biotechnol, in press.
Peternel S, Komel R (2010) Microb Cell Fact 9:66
Peternel S, Komel R (2011) Int J Mol Sci 12:8275–8287
Petsch D, Anspach FB (2000) J Biotechnol 76:97–119
Rodriguez-Carmona E, Villaverde A (2010) Trends Microbiol 18:423–430
Rodriguez-Carmona E, Cano-Garrido O, Seras-Franzoso J, Villaverde A, Garcia-Fruitos E (2010) Microb Cell Fact 9:71
Seras-Franzoso J, Díez-Gil C, Vazquez E, Garcia-Fruitos E, Cubarsi R, Ratera I, Veciana J, Villaverde A (2012) Nanomedicine (London) 7:79–93
Seras-Franzoso J, Peebo K, Garcia-Fruitos E, Vazquez E, Rinas U, Villaverde A (2013a) Acta Biomater 10:1354–1359
Seras-Franzoso J, Steurer C, Roldan M, Vendrell M, Vidaurre-Agut C, Tarruella A, Saldana L, Vilaboa N, Parera M, Elizondo E, Ratera I, Ventosa N, Veciana J, Campillo-Fernandez AJ, Garcia-Fruitos E, Vazquez E, Villaverde A (2013b) J Control Release 171:63–72
Seras-Franzoso J, Tsimbouri PM, Burgess KV, Unzueta U, Garcia-Fruitos E, Vazquez E, Villaverde A, Dalby MJ (2014) Nanomedicine (London) 9:207–220
Singh SM, Panda AK (2005) J Biosci Bioeng 99:303–310
Talafova K, Hrabarova E, Chorvat DA, Nahalka J (2013) Microb Cell Fact 12:16
Tatkiewicz WI, Seras-Franzoso J, Garcia-Fruitos E, Vazquez E, Ventosa N, Peebo K, Ratera I, Villaverde A, Veciana J (2013) ACS Nano 7:4774–4784
Vazquez E, Villaverde A (2013) Nanomedicine (London) 8:1895–1898
Vazquez E, Roldan M, Diez-Gil C, Unzueta U, Domingo-Espin J, Cedano J, Conchillo O, Ratera I, Veciana J, Daura X, Ferrer-Miralles N, Villaverde A (2010) Nanomedicine (London) 5:259–268
Vazquez E, Corchero JL, Burgueno JF, Seras-Franzoso J, Kosoy A, Bosser R, Mendoza R, Martinez-Lainez JM, Rinas U, Fernandez E, Ruiz-Avila L, Garcia-Fruitos E, Villaverde A (2012) Adv Mater 24:1742–1747
Villaverde A (2012) Nanomedicine (London) 7:1277–1279
Villaverde A, Carrio MM (2003) Biotechnol Lett 25:1385–1395
Villaverde A, Garcia-Fruitos E, Rinas U, Seras-Franzoso J, Kosoy A, Corchero JL, Vazquez E (2012) Microb Cell Fact 11:76
Acknowledgments
We are indebted to the Protein Production Platform (CIBER-BBN - UAB) for helpful technical assistance and for protein production and purification services (http://www.ciber-bbn.es/en/programas/89-plataforma-de-produccion-de-proteinas-ppp). The authors acknowledge the financial support granted to E.G.F. from INIA, (MINECO, RTA2012-00028-C02-02) Spain, and to A.V. from Agència de Gestió d’Ajuts Universitaris i de Recerca (2014SGR-132) and from the Centro de Investigación Biomédica en Red (CIBER) de Bioingeniería, Biomateriales y Nanomedicina financed by the Instituto de Salud Carlos III with assistance from the European Regional Development Fund. F.R. was supported by a predoctoral fellowship (Beca de Formación Doctoral "Francisco José de Caldas", Convocatoria 512-2010 de Colciencias) and O.C-G received a PhD fellowship from MECD. A.V. has been distinguished with an ICREA ACADEMIA Award.
Author information
Authors and Affiliations
Corresponding author
Rights and permissions
About this article
Cite this article
Rueda, F., Cano-Garrido, O., Mamat, U. et al. Production of functional inclusion bodies in endotoxin-free Escherichia coli . Appl Microbiol Biotechnol 98, 9229–9238 (2014). https://doi.org/10.1007/s00253-014-6008-9
Received:
Revised:
Accepted:
Published:
Issue Date:
DOI: https://doi.org/10.1007/s00253-014-6008-9