Abstract
A better understanding of the microbial ecology of anaerobic processes during transitional states is important to achieve a long-term efficient reactor operation. Five wastes (pig manure, biodiesel residues, ethanol stillage, molasses residues, and fish canning waste) were treated in five anaerobic reactors under the same operational conditions. The influence of the type of substrate and the effect of modifying feeding composition on the microbial community structure was evaluated. The highest biomethanation efficiency was observed in reactors fed with fish canning waste, which also presented the highest active archaeal population and the most diverse microbial communities. Only two Bacteria populations could be directly related to a particular substrate: Ilyobacter with biodiesel residues and Trichococcus with molasses residues. Results showed that the time to achieve steady-state performance after these transitional states was not dependent on the substrate treated. But reactors needed more time to handle the stress conditions derived from the start-up compared to the adaptation to a new feeding. Cluster analyses showed that the type of substrate had a clear influence on the microbiology of the reactors, and that segregation was related to the reactors performance. Finally, we conclude that the previous inoculum history treating solid waste and higher values of active Archaea population are important factors to face a successful change in substrate not entailing stability failure.
Similar content being viewed by others
References
Ahring BK (2003) Perspectives for anaerobic digestion. Adv Biochem Eng Biotechnol 81:1–30
APHA (1998) Standard methods for the examination of water and waste water, 20th edn. American Public Health Association, Washington DC
Bouvet OM, Lenormand P, Ageron E, Grimont PA (1995) Taxonomic diversity of anaerobic glycerol dissimilation in the Enterobacteriaceae. Res Microbiol 146:279–290
Briones A, Raskin L (2003) Diversity and dynamics of microbial communities in engineered environments and their implications for process stability. Curr Opin Biotechnol 14:270–276
Carballa M, Smits M, Etchebehere C, Boon N, Verstraete W (2011) Correlations between molecular and operational parameters in anaerobic lab-scale continuous stirred tank reactors. Appl Microbiol Biotechnol 89(2):303–314
Cardinali-Rezende J, Debarry RB, Colturato LFDB, Carneiro EV, Chartone-Souza E, Nascimento AMA (2009) Molecular identification and dynamics of microbial communities in digester treating organic household waste. Appl Microbiol Biotechnol 84:777–789
Chouari R, Le Paslier D, Daegelen P, Ginestet P, Weissenbach J, Sghir A (2005) Novel predominant archaeal and bacterial groups revealed by molecular analysis of an anaerobic sludge digester. Environ Microbiol 7:1104–1115
Collins G, Kavanagh S, McHugh S, Connaughton S, Kearney S, Rice O, Carrig C, Scully C, Bhreathnach N, Mahony T, Madden P, Enright AM, O′Flaherty V (2006) Accessing the black box of microbial diversity and ecophysiology: recent advances through polyphasic experiments. J Environ Sci Health A 41:897–922
De Vrieze J, Hennebel T, Boon N, Verstraete W (2012) Methanosarcina: the rediscovered methanogen for heavy duty biomethanation. Bioresour Technol 112:1–9
Dearman B, Marschner P, Bentham RH (2006) Methane production and microbial community structure in single-stage batch and sequential batch systems anaerobically codigesting food waste and biosolids. Appl Microbiol Biotechnol 69(5):589–596
Duran M, Tepe N, Yurtsever D, Punzi V, Bruno C, Mehta R (2006) Bioaugmenting anaerobic digestion of biosolids with selected strains of Bacillus, Pseudomonas, an Actinomycetes species for increased methanogenesis and odor control. Appl Microbiol Biotechnol 73:960–966
Fernández A, Huang S, Seston S, Xing J, Hickey R, Criddle C, Tiedje J (1999) How stable is stable? Function versus community composition. Appl Environ Microbiol 65:3697–3704
Gavala HN, Lyberatos G (2001) Influence of anaerobic culture acclimation on the degradation kinetics of various substrates. Biotechnol Bioeng 74(35):181–195
Hori T, Haruta S, Ueno Y, Ishii M, Igarashi Y (2006) Dynamic transition of a methanogenic population in response to the concentration of volatile fatty acids in a thermophilic anaerobic digester. Appl Environ Microbiol 72:1623–1630
Karakashev D, Batstone DJ, Angelidaki I (2005) Influence of environmental conditions on methanogenic compositions in anaerobic biogas reactors. Appl Environ Microbiol 71:331–338
Loy TW, MacDonald JC, Klopfenstein TJ, Erickson GE (2007) Effect of distillers grains or corn supplementation frequency on forage intake and digestibility. J Anim Sci 85:2625–2630
Marzorati M, Wittebolle L, Boon N, Daffonchio D, Verstraete W (2008) How to get more out of molecular fingerprints: practical tools for microbial ecology. Environ Microbiol 10:1571–1581
Nelson MC, Morrison M, Yu Z (2011) A meta-analysis of the microbial diversity observed in anaerobic digesters. Biol res Technol 102:3730–3739
Obaja D, Mace S, Costa J, Sans C, Mata-Alvarez J (2003) Nitrification, denitrification and biological phosphorus removal in a sequencing batch reactor treating piggery wastewater. Biores Technol 87(1):103–111
Oz NA, Ince O, Turker G, Ince BK (2012) Effect of seed sludge microbial community and activity on the performance of anaerobic reactors during the start-up period. World J Microbiol Biotechnol 28:637–647
Pycke BFG, Etchebehere C, Van de Caveye P, Negroni A, Verstraete W, Boon N (2011) A time-course analysis of four full-scale anaerobic digesters in relation to the dynamics of change their microbial communities. Water Sci Technol 63:769–775
Regueiro L, Veiga P, Figueroa M, Alonso-Gutierrez J, Stams AJ, Lema JM, Carballa M (2012) Relationship between microbial activity and microbial community structure in six full-scale anaerobic digesters. Microbiol Res 167(10):581–589
Scheff G, Salcher O, Lingens F (1984) Trichococcus flocculiformis gen. nov. sp. nov. A new gram-positive filamentous bacterium isolated from bulking sludge. Appl Microbiol Biotechnol 19:114–119
Sousa DZ, Pereira MA, Smidt H, Stams AJM, Alves MM (2007) Molecular assessment of complex microbial communities degrading long chain fatty acids in methanogenic bioreactors. FEMS Microbiol Ecol 60:252–265
Talbot G, Topp E, Palin MF, Massé DI (2008) Evaluation of molecular methods used for establishing the interactions and functions of microorganisms in anaerobic bioreactors. Water Res 42:513–537
Ueno Y, Haruta S, Ishii M, Igarashi Y (2001) Changes in product formation and bacterial community by dilution rate on carbohydrate fermentation by methanogenic microflora in continuous flow stirred tank reactor. Appl Microbiol Biotechnol 57:65–73
Verstraete W, van Lier J, Pohland F, Tilche A, Mata-Alvarez J, Ahring B, Hawkes D, Cecchi F, Moletta R, Noike T (2000) Developments at the Second International Symposium on Anaerobic Digestion of Solid Waste (Barcelona, 15–19 June 1999). Biores Technol 73:287–289
Wang H, Tolvanen K, Lehtomäki A, Puhakka J, Rintala J (2010) Microbial community structure in anaerobic co-digestion of grass silage and cow manure in a laboratory continuously stirred tank reactor. Biodegradation 21(1):135–146
Ward AJ, Hobb PJ, Holliman PJ, Jones DL (2008) Optimisation of the anaerobic digestion of agricultural resources—review. Biores Technol 99:7928–7940
Werner JJ, Knights D, Garcia ML, Scalfone NB, Smith S, Yarasheskim K, Cummings TA, Beers AR, Knight R, Angenent LT (2011) Bacterial community structures are unique and resilient in full-scale bioenergy systems. Proc Nat Acad Sci 108(10):4158–4163
Wittebolle L, Marzorati M, Clement L, Balloi A, Daffonchio D, Heylen K, De Vos P, Verstraete W, Boon N (2009) Initial community evenness favours functionality under selective stress. Nature 458:623–626
Acknowledgments
This research was supported by the Ministry of Economy and Competitiveness through NOVEDAR_Consolider (CSD2007-00055) and COMDIGEST (CTM2010-17196) projects and by the Xunta de Galicia through GRC2010/37 and MicroDAN (EM2012/087) projects and the postdoctoral contract (IPP-08-37) to Dr. Marta Carballa.
Author information
Authors and Affiliations
Corresponding author
Electronic supplementary material
Below is the link to the electronic supplementary material.
ESM 1
(PDF 422 kb)
Rights and permissions
About this article
Cite this article
Regueiro, L., Veiga, P., Figueroa, M. et al. Influence of transitional states on the microbial ecology of anaerobic digesters treating solid wastes. Appl Microbiol Biotechnol 98, 2015–2027 (2014). https://doi.org/10.1007/s00253-013-5378-8
Received:
Revised:
Accepted:
Published:
Issue Date:
DOI: https://doi.org/10.1007/s00253-013-5378-8