Abstract
The thermotolerant methylotrophic yeast Hansenula polymorpha has recently been gaining interest as a promising host for bioethanol production due to its ability to ferment xylose, glucose, and cellobiose at elevated temperatures up to 48 °C. In this study, we identified and characterized alcohol dehydrogenase 1 of H. polymorpha (HpADH1). HpADH1 seems to be a cytoplasmic protein since no N-terminal mitochondrial targeting extension was detected. Compared to the ADHs of other yeasts, recombinant HpADH1 overexpressed in Escherichia coli exhibited much higher catalytic efficiency for ethanol oxidation along with similar levels of acetaldehyde reduction. HpADH1 showed broad substrate specificity for alcohol oxidation but had an apparent preference for medium chain length alcohols. Both ADH isozyme pattern analysis and ADH activity assay indicated that ADH1 is the major ADH in H. polymorpha DL-1. Moreover, an HpADH1-deleted mutant strain produced less ethanol in glucose or glycerol media compared to wild-type. Interestingly, when the ADH1 mutant was complemented with an HpADH1 expression cassette, the resulting strain produced significantly increased amounts of ethanol compared to wild-type, up to 36.7 g l−1. Taken together, our results suggest that optimization of ADH1 expression would be an ideal method for developing H. polymorpha into an efficient bioethanol production strain.
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References
Bennetzen JL, Hall BD (1982) The primary structure of the Saccharomyces cerevisiae gene for alcohol dehydrogenase. J Biol Chem 257:3018–3025
Bozzi A, Saliola M, Falcone C, Bossa F, Martini F (1997) Structural and biochemical studies of alcohol dehydrogenase isozymes from Kluyveromyces lactis. Biochim Biophys Acta 1339:133–142
Bucciarelli T, Saliola M, Brisdelli F, Bozzi A, Falcone C, Di Ilio C, Martini F (2009) Oxidation of Cys278 of ADH I isozyme from Kluyveromyces lactis by naturally occurring disulfides causes its reversible inactivation. Biochim Biophys Acta (BBA)—Proteins & Proteomics 1794:563–568
Cho J-Y, Jeffries TW (1998) Pichia stipitis genes for alcohol dehydrogenase with fermentative and respiratory functions. Appl Environ Microbiol 64:1350–1358
da Silva GP, Mack M, Contiero J (2009) Glycerol: a promising and abundant carbon source for industrial microbiology. Biotechnol Adv 27:30–39
de Smidt O, du Preez JC, Albertyn J (2008) The alcohol dehydrogenases of Saccharomyces cerevisiae: a comprehensive review. FEMS Yeast Res 8:967–978
Denis CL, Ferguson J, Young ET (1983) mRNA levels for the fermentative alcohol dehydrogenase of Saccharomyces cerevisiae decrease upon growth on a nonfermentable carbon source. J Biol Chem 258:1165–1171
Dharmadi Y, Murarka A, Gonzalez R (2006) Anaerobic fermentation of glycerol by Escherichia coli: a new platform for metabolic engineering. Biotechnol Bioeng 94:821–829
Eklund H, Branden CI, Jornvall H (1976) Structural comparisons of mammalian, yeast and bacillar alcohol dehydrogenases. J Mol Biol 102:61–73
Fejér O, Orosz-Fejér K, Belea A (1979) Gel isoelectric focusing of wheat alcohol dehydrogenase. Theor Appl Genet 54:37–39
Ganzhorn AJ, Green DW, Hershey AD, Gould RM, Plapp BV (1987) Kinetic characterization of yeast alcohol dehydrogenases. Amino acid residue 294 and substrate specificity. J Biol Chem 262:3754–3761
Gellissen G (2002) In: Gellissen G (ed) Hansenula polymorpha: biology and applications. Wiley-VCH, Weinheim
Green DW, Sun HW, Plapp BV (1993) Inversion of the substrate specificity of yeast alcohol dehydrogenase. J Biol Chem 268:7792–7798
Ishchuk OP, Voronovsky AY, Stasyk OV, Gayda GZ, Gonchar MV, Abbas CA, Sibirny AA (2008) Overexpression of pyruvate decarboxylase in the yeast Hansenula polymorpha results in increased ethanol yield in high-temperature fermentation of xylose. FEMS Yeast Res 8:1164–1174
Ito T, Nakashimada Y, Senba K, Matsui T, Nishio N (2005) Hydrogen and ethanol production from glycerol-containing wastes discharged after biodiesel manufacturing process. J Biosci Bioeng 100:260–265
Jeffries TW, Jin Y-S (2000) Ethanol and thermotolerance in the bioconversion of xylose by yeasts. Advances in Applied Microbiology 47:221–268
Jornvall H, Eklund H, Branden CI (1978) Subunit conformation of yeast alcohol dehydrogenase. J Biol Chem 253:8414–8419
Kang HA, Kang W, Hong W-K, Kim MW, Kim J-Y, Sohn J-H, Choi E-S, Choe K-B, Rhee SK (2001) Development of expression systems for the production of recombinant human serum albumin using the MOX promoter in Hansenula polymorpha DL-1. Biotechnol Bioeng 76:175–185
Kang HA, Sohn JH, Agaphonov MO, Choi ES, Ter-Avanesyan MD, Rhee SK (2002) Development of expression systems for the production of recombinant proteins in Hansenula polymorpha DL-1. In: Gellissen G (ed) Hansenula polymorpha—Biology and Applications. Wiley-VCH, pp. 124–146.
Kim KJ, Howard AJ (2002) Crystallization and preliminary X-ray diffraction analysis of the trigonal crystal form of Saccharomyces cerevisiae alcohol dehydrogenase I: evidence for the existence of Zn ions in the crystal. Acta Crystallogr D Biol Crystallogr 58:1332–1334
Kim MW, Kim EJ, Kim JY, Park JS, Oh DB, Shimma Y, Chiba Y, Jigami Y, Rhee SK, Kang HA (2006) Functional characterization of the Hansenula polymorpha HOC1, OCH1, and OCR1 genes as members of the yeast OCH1 mannosyltransferase family involved in protein glycosylation. J Biol Chem 281
Leskovac V, Trivic S, Pericin D (2002) The three zinc-containing alcohol dehydrogenases from baker’s yeast, Saccharomyces cerevisiae. FEMS Yeast Res 2:481–494
Lutstorf U, Megnet R (1968) Multiple forms of alcohol dehydrogenase in Saccharomyces cerevisiae. I. Physiological control of ADH-2 and properties of ADH-2 and ADH-4. Arch Biochem Biophys 126:933–944
Lyne R, Burns G, Mata J, Penkett C, Rustici G, Chen D, Langford C, Vetrie D, Bahler J (2003) Whole-genome microarrays of fission yeast: characteristics, accuracy, reproducibility, and processing of array data. BMC Genomics 4:27
Martin Y, Navarro FJ, Siverio JM (2008) Functional characterization of the Arabidopsis thaliana nitrate transporter CHL1 in the yeast Hansenula polymorpha. Plant Mol Biol 68:215–224
Murarka A, Dharmadi Y, Yazdani SS, Gonzalez R (2008) Fermentative utilization of glycerol by Escherichia coli and its implications for the production of fuels and chemicals. Appl Environ Microbiol 74:1124–1135
Nevoigt E, Stahl U (1997) Osmoregulation and glycerol metabolism in the yeast Saccharomyces cerevisiae. FEMS Microbiol Rev 21:231–241
Oh DB, Park JS, Kim MW, Cheon SA, Kim EJ, Moon HY, Kwon O, Rhee SK, Kang HA (2008) Glycoengineering of the methylotrophic yeast Hansenula polymorpha for the production of glycoproteins with trimannosyl core N-glycan by blocking core oligosaccharide assembly. Biotechnol J 3:659–668
Park YC, Yun NR, San KY, Bennett GN (2006) Molecular cloning and characterization of the alcohol dehydrogenase ADH1 gene of Candida utilis ATCC 9950. J Ind Microbiol Biotechnol 33:1032–1036
Park JN, Sohn MJ, Oh DB, Kwon O, Rhee SK, Hur CG, Lee SY, Gellissen G, Kang HA (2007) Identification of the cadmium-inducible Hansenula polymorpha SEO1 gene promoter by transcriptome analysis and its application to whole-cell heavy-metal detection systems. Appl Environ Microbiol 73:5990–6000
Passoth V, Schäfer B, Liebel B, Weierstall T, Klinner U (1998) Molecular cloning of alcohol dehydrogenase genes of the yeast Pichia stipitis and identification of the fermentative ADH. Yeast 14:1311–1325
Postma E, Verduyn C, Scheffers WA, Van Dijken JP (1989) Enzymic analysis of the crabtree effect in glucose-limited chemostat cultures of Saccharomyces cerevisiae. Appl Environ Microbiol 55:468–477
Russell DW, Smith M, Williamson VM, Young ET (1983) Nucleotide sequence of the yeast alcohol dehydrogenase II gene. J Biol Chem 258:2674–2682
Ryabova OB, Chmil OM, Sibirny AA (2003) Xylose and cellobiose fermentation to ethanol by the thermotolerant methylotrophic yeast Hansenula polymorpha. FEMS Yeast Res 4:157–164
Sohn JH, Choi ES, Kang HA, Rhee JS, Rhee SK (1999) A family of telomere-associated autonomously replicating sequences and their functions in targeted recombination in Hansenula polymorpha DL-1. J Bacteriol 181:1005–1013
Sun HW, Plapp BV (1992) Progressive sequence alignment and molecular evolution of the Zn-containing alcohol dehydrogenase family. J Mol Evol 34:522–535
Verduyn C, Breedveld GJ, Scheffers WA, Van Dijken JP (1988) Substrate specificity of alcohol dehydrogenase from the yeast Hansenyls polymorpha CBS 4732 and Candida utilis CBS 621. Yeast 4:143–148
Voronovsky AY, Rohulya OV, Abbas CA, Sibirny AA (2009) Development of strains of the thermotolerant yeast Hansenula polymorpha capable of alcoholic fermentation of starch and xylan. Metab Eng 11:234–242
Acknowledgement
This work was supported by a grant from the KRIBB Research Initiative Program and by a National Research Foundation of Korea (NRF) grant funded by the Korean government (MEST) (No. 2009-0075186). S. Suwannarangsee was supported by the International Scholar Exchange Fellowship for the academic year of 2008–2009 by the Korea Foundation for Advanced Studies.
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Suwannarangsee, S., Oh, DB., Seo, JW. et al. Characterization of alcohol dehydrogenase 1 of the thermotolerant methylotrophic yeast Hansenula polymorpha . Appl Microbiol Biotechnol 88, 497–507 (2010). https://doi.org/10.1007/s00253-010-2752-7
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DOI: https://doi.org/10.1007/s00253-010-2752-7