Abstract
Surface plasmon resonance imaging (SPRI) is a powerful tool for simple, fast and cheap nucleic acid detection. Great efforts have been made during the last decade with the aim of developing even more sensitive and specific SPRI-based methods to be used for the direct detection of DNA and RNA. Here, after a description of the fundamentals of SPRI, the state of the art of recent platform and assay developments is presented, with special attention given to advances in SPRI signal enhancement procedures.
Similar content being viewed by others
References
Sassolas A, Leca-Bouvier BD, Blum LJ (2008) Chem Rev 108:109–139
Alkan C, Coe BP, Eichler EE (2011) Nat Rev Gen 12:363–375
Schaaf CP, Wiszniewska J, Beaudet AL (2011) Annu Rev Genomics Hum Genet 12:25–51
Germini A, Rossi S, Zanetti A, Corradini R, Fogher C, Marchelli R (2005) J Agric Food Chem 53:3958–3962
Roh SW, Abell GCJ, Kim KH, Nam YD, Bae JW (2011) Trends Biotechnol 28:291–299
Spoto G, Corradini R (eds) (2012) Detection of non-amplified genomic DNA. Springer, Dordrecht
Gong P, Levicky R (2008) Proc Natl Acad Sci USA 105:5301–5306
Homola J (2006) Surface plasmon resonance based sensors. Springer, Berlin
Rothenhausler B, Knoll W (1988) Nature 332:615–617
Spoto G, Minunni M (2012) J Phys Chem Lett 3:2682–2691
Shalabney A, Abdulhalim I (2011) Laser Photon Rev 5:571–606
Raether H (1988) Surface plasmons on smooth and rough surfaces and on gratings. Springer, Berlin
D’Agata R, Grasso G, Iacono G, Spoto G, Vecchio G (2006) Org Biomol Chem 4:610–612
Lyon LA, Musick MD, Natan MJ (1998) Anal Chem 70:5177–5183
Arena G, Contino A, Longo E, Sgarlata C, Spoto G, Zito V (2004) Chem Commun 1812–1813
Piliarik M, Homola J (2008) Sens Actuators B 134:353–355
Dostalek J, Homola J (2008) Sens Actuators B 129:303–310
Levicky R, Horgan A (2005) Trends Biotechnol 23:143–149
Mei R, Hubbell E, Bekiranov S, Mittmann M, Christians RC, Shen M, Lu G, Fang J, Liu W, Ryder T et al (2003) Proc Natl Acad Sci USA 100:11237–11242
Chen WY, Hu WP, Su YD, Taylor A, Jiang S, Chang GL (2007) Sens Actuators B 125:607–614
Wernersson R, Junkcer AS, Nielsen HB (2007) Nat Protoc 2:2677–2691
Ermini ML, Scarano S, Bini R, Banchelli M, Berti D, Mascini M, Minunni M (2011) Biosens Bioelectron 26:4785–4790
Ladd J, Taylor AD, Piliarik M, Homola J, Jiang S (2008) Anal Chem 80:4231–4236
Opdahl A, Petrovykh DY, Kimura-Suda H, Tarlov MJ, Whitman LJ (2007) Proc Natl Acad Sci USA 104:9–14
Gong P, Lee C-Y, Gamble LJ, Castner DG, Grainger DW (2006) Anal Chem 78:3326–3334
Georgiadis RM, Peterlinz KP, Peterson AW (2000) J Am Chem Soc 122:3166–3173
Peterson AW, Richard JH, Georgiadis RM (2001) Nucleic Acids Res 29:5163–5168
Livache T, Guedon P, Brakha C, Roget A, Levy Y, Bidan G (2001) Synth Met 121:1443–1444
Polsky R, Harper JC, Wheeler DR, Dirk SM, Arango DC, Brozik SM (2008) Biosens Bioelectron 23:757–764
Pillet F, Thibault C, Bellon S, Maillart E, Trévisiol E, Vieua C, François JM, Leberre VA (2010) Sens Actuators B 147:87–92
Chen Y, Nguyen A, Niu L, Corn RM (2009) Langmuir 25:5054–5060
Hayashi G, Hagihara M, Kobori A, Nakatani K (2007) ChemBioChem 8:169–171
Hayashi G, Hagihara M, Nakatani K (2008) J Biotechnol 135:157–160
Ulman A (1991) An introduction to ultrathin organic films: From Langmuir-Blodgett to self-assembly. Academic, Boston
Knoll W (1998) Annu Rev Phys Chem 49:569–638
Gifford LK, Sendroiu IE, Corn RM, Lupták A (2010) J Am Chem Soc 132:9265–9267
Scott Phillips K, Han J-H, Martinez M, Wang Z, Carter D, Cheng Q (2006) Anal Chem 78:596–603
Sendroiu IE, Warner ME, Corn RM (2009) Langmuir 25:11282–11284
Sun B, Colavita PE, Kim H, Lockett M, Marus MS, Smith LM et al (2006) Langmuir 22:9598–9605
Lockett MR, Weibel SC, Phillips MF, Shortreed MR, Sun B, Corn RM, Hamers RJ, Cerrina F, Smith LM (2008) J Am Chem Soc 130:8611–8613
Lockett MR, Smith LM (2009) Anal Chem 81:6429–6437
Mandir JB, Lockett MR, Phillips MF, Allawi HT, Lyamichev VI, Smith LM (2009) Anal Chem 81:8949–8956
Fire A (1999) Trends Genet 15:358–363
Wilkop T, Wang Z, Cheng Q (2004) Langmuir 20:11141–11148
Singh BK, Hillier AC (2007) Anal Chem 79:5124–5132
Barbulovic-Nad I, Lucente M, Sun Y, Zhang M, Wheeler AR, Bussman M (2006) Crit Rev Biotechnol 26:237–259
Eddings MA, Eckman JW, Arana CA, Papalia GA, Connolly JE, Gale BK, Myszka DG (2009) Anal Biochem 385:309–313
Lee K-H, Su Y-D, Chen S-J, Tseng F-G, Lee G-B (2007) Biosens Bioelectron 23:466–472
Liu J, Eddings MA, Miles AR, Bukasov R, Gale BK, Shumaker-Parry JS (2009) Anal Chem 81:4296–4301
Ouellet E, Lausted C, Lin T, Yang CWT, Hood L, Lagally ET (2010) Lab Chip 10:581–588
Grasso G, D’Agata R, Zanoli L, Spoto G (2009) Microchem J 93:82–86
Amarie D, Alileche A, Dragnea B, Glazier JA (2010) Anal Chem 82:343–352
D’Agata R, Corradini R, Grasso G, Marchelli R, Spoto G (2008) ChemBioChem 9:2067–2070
D’Agata R, Corradini R, Ferretti C, Zanoli L, Gatti M, Marchelli R, Spoto G (2010) Biosens Bioelectron 25:2095–2100
D’Agata R, Breveglieri G, Zanoli LM, Borgatti M, Spoto G, Gambari R (2011) Anal Chem 83:8711–8717
Weibel DB, DiLuzio WR, Whitesides GM (2007) Nat Rev Microbiol 5:209–218
Sato Y, Hosokawa K, Maeda M (2008) Colloids Surf B 62:71–76
Schaerlia Y, Hollfelder F (2009) Mol Biosyst 5:1392–1404
Zanoli LM, Licciardello M, D’Agata R, Lantano C, Calabretta A, Corradini R, Marchelli R, Spoto G (2012) Anal Bioanal Chem. doi:10.1007/s00216-011-5638-3
Malic L, Veres T, Tabrizian M (2009) Biosens Bioelectron 24:2218–2224
Malic L, Veresc T, Tabrizian M (2011) Biosens Bioelectron 26:2053–2059
Malic L, Veres T, Tabrizian M (2009) Lab Chip 9:473–475
Stewart ME, Anderton CR, Thompson LB, Maria J, Gray SK, Rogers JA, Nuzzo RG (2008) Chem Rev 108:494–521
Haes AJ, Van Duyne RP (2004) Anal Bioanal Chem 379:920–930
Malic L, Cui B, Veres T, Tabrizian M (2007) Opt Lett 32:3092–3094
Byun KM, Shuler ML, Kim SJ, Yoon SJ, Kim D (2008) J Lightwave Technol 26:1472–1478
Hoa XD, Kirk AG, Tabrizian M (2009) Biosens Bioelectron 24:3043–3048
Kim K, Kim DJ, Moon S, Kim D, Byun KM (2009) Nanotechnology 20:315501
Henzie J, Lee J, Lee MH, Hasan W, Odom TW (2009) Annu Rev Phys Chem 60:147–165
Malic L, Cui B, Tabrizian M, Veres T (2009) Opt Express 22:20386–20392
Piliarik M, Vaisocherová H, Homola J (2005) Biosens Bioelectron 20:2104–2110
Piliarik M, Vaisocherová H, Homola J (2007) Sens Actuators B 121:187–193
Slavik S, Homola J (2007) Sens Actuators B 123:10–12
Wark AW, Lee HJ, Corn RM (2005) Anal Chem 77:3904–3907
Berger CEH, Kooyman RPH, Greve J (1994) Rev Sci Instrum 65:2829–2836
Wark AW, Lee HJ, Qavi AJ, Corn RM (2007) Anal Chem 79:6697–6701
Halpern AR, Chen Y, Corn RM, Kim D (2011) Anal Chem 83:2801–2806
Fiche JB, Fuchs J, Buhot A, Calemczuk R, Livache T (2008) Anal Chem 80:1049–1057
Minunni M, Tombelli S, Fonti J, Spiriti MM, Mascini M, Bogani P, Buiatti M (2005) J Am Chem Soc 127:7966–7967
Storhoff JJ, Lucas AD, Garimella V, Bao YP, Muller UR (2004) Nat Biotechnol 22:883–887
Zanoli LM, D’Agata R, Spoto G (2012) Anal Bioanal Chem 402:1759–1771
He L, Musick MD, Nicewarner NR, Salinas FG, Benkovic SJ, Natan MJ, Keating CD (2000) J Am Chem Soc 122:9071–9077
Lee HJ, Li Y, Wark AW, Corn RM (2005) Anal Chem 77:5096–5100
Goodrich TT, Lee HJ, Corn RM (2004) Anal Chem 76:6173–6178
Fang S, Lee HJ, Wark AW, Corn RM (2006) J Am Chem Soc 128:14044–14046
Teramura Y, Arima Y, Iwata H (2006) Anal Biochem 357:208–215
Zhou WJ, Chen Y, Corn RM (2011) Anal Chem 83:3897–3902
Xiao Q, Zhou B, Huang S, Tian F, Guan H, Ge Y, Liu X, He Z, Liu Y (2009) Nanotechnology 20:325101
Golub E, Pelossof G, Freeman R, Zhang H, Willner I (2009) Anal Chem 81:9291–9298
Cameron PJ, Zhong XH, Knoll W (2007) J Phys Chem C 111:10313–10319
Malic L, Sandros MG, Tabrizian M (2011) Anal Chem 83:5222–5229
Acknowledgments
We acknowledge support from MIUR (PRIN 20093N774P, FIRB RBPR05JH2P ITALNANONET RINAME RBAP114AMK).
Author information
Authors and Affiliations
Corresponding author
Additional information
Published in the special issue Analytical Science in Italy with guest editor Aldo Roda.
Rights and permissions
About this article
Cite this article
D’Agata, R., Spoto, G. Surface plasmon resonance imaging for nucleic acid detection. Anal Bioanal Chem 405, 573–584 (2013). https://doi.org/10.1007/s00216-012-6563-9
Received:
Revised:
Accepted:
Published:
Issue Date:
DOI: https://doi.org/10.1007/s00216-012-6563-9