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Chemoinformatics: a new field with a long tradition

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Abstract

Chemoinformatics is the application of informatics methods to solve chemical problems. Although this term was introduced only a few years ago, this field has a long history with its roots going back more than 40 years. Work on chemical structure representation and searching, quantitative structure–activity relationships, chemometrics, molecular modeling as well as computer-assisted structure elucidation and synthesis design was initiated in the 1960s. These different origins have now merged into a discipline of its own that is in full bloom. All areas of chemistry from analytical chemistry to drug design can benefit from chemoinformatics methods. And there are still many challenging chemical problems waiting for solutions through the further development of chemoinformatics.

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References

  1. FK Brown (1998) Annu Rev Med Chem 33:375–384

    Article  CAS  Google Scholar 

  2. Paris G (August 1999 Meeting of the American Chemical Society), quoted by W. Warr at http://www.warr.com/warrzone.htm

  3. FH Allen (2002) Acta Crystallogr B58:380–388 http://www.ccdc.cam.ac.uk/

    CAS  Google Scholar 

  4. FA Tate (1967) Annu Rev Inf Sci Technol 2:285–309

    CAS  Google Scholar 

  5. EG Smith (1968) The Wiswesser line-formula chemical notation. McGraw-Hill

  6. GM Dyson, MF Lynch, HL Morgan (1968) Inf Storage Retr 4:27–83

    Article  CAS  Google Scholar 

  7. D Weininger (1988) J Chem Inf Comput Sci 28:31–36

    Article  CAS  Google Scholar 

  8. HL Morgan (1965) J Chem Doc 5:107–113

    Article  CAS  Google Scholar 

  9. LC Ray, RA Kirsch (1957) Science 126:814–819

    Article  Google Scholar 

  10. EH Sussenguth (1965) J Chem Doc 5:36–43

    Article  CAS  Google Scholar 

  11. GW Adamson, J Cowell, MF Lynch, AHW McLure, WG Town, AM Yapp (1973) J Chem Doc 13:153–157

    Article  CAS  Google Scholar 

  12. C Hansch, T Fujita (1964) J Am Chem Soc 86:856?864 ibid. 1616–1626

    Google Scholar 

  13. SM Free Jr, JW Wilson (1964) J Med Chem 7:395–399

    Article  CAS  Google Scholar 

  14. QSAR and Modelling Society: http://www.qsar.org Molecular Graphics and Modeling Society: http://mgms.org

  15. BR Kowalski, CF Bender (1972) J Am Chem Soc 94:5632–5639

    Article  CAS  Google Scholar 

  16. S Wold, A Ruhe, H Wold, WJ Dunn III (1984) SIAM J Sci Statist Comput 5:735–743

    Article  Google Scholar 

  17. International Chemometrics Society: http://www.mamics.nysaes.cornell.edu/chem-society.html

  18. J Zupan, J Gasteiger (1999) Neural networks in chemistry and drug design, 2nd edn. Wiley-VCH, Weinheim

    Google Scholar 

  19. AM Lesk (1977) Comput Biol Med 7:113–129

    Article  PubMed  CAS  Google Scholar 

  20. RK Lindsay, BG Buchanan, EA Feigenbaum, J Lederberg (1980) Applications of artificial intelligence for organic chemistry; the DENDRAL project. McGraw-Hill, New York

    Google Scholar 

  21. NAB Gray (1986) Computer assisted structure elucidation. Wiley, New York

    Google Scholar 

  22. SI Sasaki, Abe, T Ouki, M Sakamoto, S Ochiai (1968) Anal Chem 40:2220–2223

    Article  CAS  Google Scholar 

  23. CA Shelley, TR Hays, ME Munk, HV Roman (1978) Anal Chim Acta 103:121–132

    Article  CAS  Google Scholar 

  24. EJ Corey, WT Wipke (1969) Science 166:178–193

    Article  CAS  Google Scholar 

  25. J Blair, J Gasteiger, C Gillespie, PD Gillespie, I Ugi (1974) Tetrahedron 30:1845–1859

    Article  CAS  Google Scholar 

  26. JB Hendrickson (1971) J Am Chem Soc 93:6847–6854

    Article  CAS  Google Scholar 

  27. HL Gelernter, NS Sridharan, AJ Hart, S-C Yen (1973) Top Curr Chem 41:113–150

    CAS  Google Scholar 

  28. J Gasteiger (ed) (2003) Handbook of chemoinformatics—from data to knowledge. Wiley-VCH, Weinheim

    Google Scholar 

  29. J Gasteiger, T Engel (Eds) (2003) Chemoinformatics—a textbook. Wiley-VCH, Weinheim

    Google Scholar 

  30. AR Leach, VJ Gillet (2003) An introduction to chemoinformatics, Kluwer Adademic, Dordrecht

    Google Scholar 

  31. P Selzer, J Gasteiger, H Thomas, R Salzer (2000) Chem Eur J 6:920–927

    Article  CAS  Google Scholar 

  32. J Aires de Sousa, M Hemmer, J Gasteiger (2002) Anal Chem 74:80–90

    Article  PubMed  CAS  Google Scholar 

  33. W Robien (1998) In: PvR Schleyer, NL Allinger, T Clark, J Gasteiger, PA Kollman, HF Schaefer III, RR Schreiner (eds) Encyclopedia of computational chemistry, vol 3. Wiley, Chichester, pp 1845–1857

  34. C Steinbeck (2001) J Chem Inf Comput Sci 41:1500–1507

    Article  PubMed  CAS  Google Scholar 

  35. M Pförtner, M Sitzmann (2003) In: J Gasteiger (ed) Handbook of chemoinformatics, Wiley-VCH, Weinheim, pp 1457–1507

    Google Scholar 

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Acknowledgements

The development of the new discipline of chemoinformatics was only possible because quite a few scientists in different areas of chemistry were visionaries who realized the great potential of computer technology as well as mathematics and informatics methods for solving chemical problems. They ventured into unexplored areas and came up with novel solutions. In my research group I was lucky enough to have a series of able coworkers take up the challenge and explore into an area where the outcome was not clear. In this way, we could achieve a lot. I am indebted to my coworkers for pushing ahead with our research and to my colleagues who worked hard to develop chemoinformatics into a discipline of its own.

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Correspondence to Johann Gasteiger.

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Gasteiger, J. Chemoinformatics: a new field with a long tradition. Anal Bioanal Chem 384, 57–64 (2006). https://doi.org/10.1007/s00216-005-0065-y

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