Skip to main content
Log in

Identification of three Zwittermicin A biosynthesis-related genes from Bacillus thuringiensis subsp. kurstaki strain YBT-1520

  • Original Paper
  • Published:
Archives of Microbiology Aims and scope Submit manuscript

Abstract

Zwittermicin A (ZwA) is a novel, broad-spectrum linear aminopolyol antibiotic produced by some Bacillus cereus and Bacillus thuringiensis. However, only part of its biosynthesis cluster has been identified and characterized from B. cereus UW85. To better understand the biosynthesis cluster of ZwA, a bacterial artificial chromosome (BAC) library of B. thuringiensis subsp. kurstaki strain YBT-1520, a ZwA-producing strain, was constructed. Two BAC clones, 1F8 and 5E2, were obtained by PCR, which overlap the known ZwA biosynthesis cluster of B. cereus UW85. This ZwA biosynthesis cluster is at least 38.6 kb and is located on the chromosome, instead of the plasmid. Partial DNA sequencing revealed both BAC clones carry three new ZwA biosynthesis-related genes, zwa6, zwa5A and zwa5B, which were found at the corresponding location of B. cereus UW85. Putative amino acid sequences of these genes shown that ZWA6 is homologous to a typical carbamoyltransferase from Streptomyces avermitilis, while ZWA5A and ZWA5B are homologs of cysteine synthetase and ornithine cyclodeaminase which jointly synthesize 2,3-diaminopropionate in the viomycin biosynthesis pathway, respectively. The identification of these three genes further supports the hypothesized ZwA biosynthesis pathway.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Fig. 1
Fig. 2
Fig. 3
Fig. 4
Fig. 5

Similar content being viewed by others

Abbreviations

A:

Adenylation domain

ACP:

Acyl carrier domain

BGSC:

Bacillus Genetic Stock Center

C:

Condensation domain

KS:

Ketosynthase

KR:

Ketoreductase

NRPS:

Nonribosomal peptide synthetase

PCP:

Peptidyl carrier protein

PKS:

Polyketide synthase

PLP:

Pyridoxal 5′-phosphate

ZwA:

Zwittermicin A

References

  • Ahlert J, Shepard E, Lomovskaya N, et al (2002) The calicheamicin gene cluster and its iterative type I enediyne PKS. Science 297:1173–1176

    Article  PubMed  CAS  Google Scholar 

  • Ansari MZ, Yadav G, Gokhale RS, Mohanty D (2004) NRPS–PKS: a knowledge-based resource for analysis of NRPS/PKS megasynthases. Nucleic Acids Res 32(web server issue):W405–W413

    Google Scholar 

  • Broderick NA, Goodman RM, Raffa KF, Handelsman J (2000) Synergy between zwittermicin A and Bacillus thuringiensis subsp. kurstaki against gypsy moth (Lepidoptera: Lymantriidae). Environ Entomol 29:101–107

    Article  CAS  Google Scholar 

  • Broderick NA, Goodman RM, Handelsman J, Raffa KF (2003) Effect of host diet and insect source on synergy of gypsy moth (Lepidoptera: Lymantriidae) mortality to Bacillus thuringiensis subsp. kurstaki by zwittermicin A. Environ Entomol 32:387–391

    Google Scholar 

  • Du LC, Sánchez C, Chen M, Edwards DJ, Shen B (2000) The biosynthetic gene cluster for the antitumor drug bleomycin from Streptomyces verticillus ATCC15003 supporting functional interactions between nonribosomal peptide synthetases and a polyketide synthase. Chem Biol 7:623–642

    Article  PubMed  CAS  Google Scholar 

  • Emmert EA, Klimowicz AK, Thomas MG, Handelsman J (2004) Genetics of zwittermicin A production by Bacillus cereus. Appl Environ Microbiol 70(1):104–113

    Article  PubMed  CAS  Google Scholar 

  • He HY, Silo-Suh LA, Handelsman J, Clardy J (1994) Zwittermicin A, an antifungal and plant protection agent from Bacillus cereus. Tetrahedron Lett 35(16):2499–2502

    Article  CAS  Google Scholar 

  • Ivanova N, Sorokin A, Anderson I, et al (2003) Genome sequence of Bacillus cereus and comparative analysis with Bacillus anthracis. Nature 423(6935):87–91

    Article  PubMed  CAS  Google Scholar 

  • Luo MZ, Wing RA (2003) An improved method for plant BAC library construction. In: Grotewold E (ed) Methods in molecular biology. Humana, Totowa

    Google Scholar 

  • Milner JL, Stohl EA, Handelsman J (1996) Zwittermicin A resistance gene from Bacillus cereus. J Bacteriol 78:4266–4272

    Google Scholar 

  • Nair JR, Narasimman G, Sekar V (2004) Cloning and partial characterization of zwittermicin A resistance gene cluster from Bacillus thuringiensis subsp. kurstaki strain HD1. J Appl Microbiol 97:495–503

    CAS  Google Scholar 

  • Omura S, Ikeda H, Ishikawa J, et al (2001) Genome sequence of an industrial microorganism Streptomyces avermitilis: deducing the ability of producing secondary metabolites. Proc Natl Acad Sci USA 98(21):12215–12220

    Article  PubMed  CAS  Google Scholar 

  • Read T, Peterson S, Tourasse N, et al (2003) The genome sequence of Bacillus anthracis Ames and comparison to closely related bacteria. Nature 423(6935):81–86

    Article  PubMed  CAS  Google Scholar 

  • Rondon MR, Raffel SJ, Goodman RM, Handelsman J (1999) Toward functional genomics in bacteria: analysis of gene expression in Escherichia coli from a bacterial artificial chromosome library of Bacillus cereus. Proc Natl Acad Sci USA 25.96:6451–6455

    Article  Google Scholar 

  • Sambrook J, Russell DW (2001) Molecular cloning: a laboratory manual, 3rd edn. Cold Spring Harbor Laboratory Press, Cold Spring Harbor

    Google Scholar 

  • Schnepf E, Crickmore N, Van Rie J, et al (1998) Bacillus thuringiensis and its pesticidal crystal proteins. Microbiol Mol Biol Rev 62:775–806

    PubMed  CAS  Google Scholar 

  • Silo-Suh LA, Lethbridge BJ, Raffel SJ, He HY, Clardy J, Handelsman J (1994) Biological activities of two fungistatic antibiotics produced by Bacillus cereus UW85. Appl Environ Microbiol 60(6):2023–2030

    PubMed  CAS  Google Scholar 

  • Silo-Suh LA, Stabb EV, Raffel SJ, Handelsman J (1998) Target range of zwittermicinA, an aminopolyol antibiotic from Bacillus cereus. Curr Microbiol 37:6–11

    Article  PubMed  CAS  Google Scholar 

  • Stabb EV, Handelsman J (1998) Genetic analysis of zwittermicin A resistance in Escherichia coli: effects on membrane potential and RNA polymerase. Mol Microbiol 27(2):311–322

    Article  PubMed  CAS  Google Scholar 

  • Stabb EV, Jacobson LM, Handelsman J (1994) Zwittermicin A-producing strains of Bacillus cereus from diverse soils. Appl Environ Microbiol 60(12):4404–4412

    PubMed  CAS  Google Scholar 

  • Stohl EA, Milner JL, Handelsman J (1999a) Zwittermicin A biosynthetic cluster. Gene 237:403–411

    Article  CAS  Google Scholar 

  • Stohl EA, Brady SF, Clardy J, Handelsman J (1999b) ZmaR, a novel and widespread antibiotic resistance determinant that acetylates zwittermicin A. J Bacteriol 181:5455–5460

    CAS  Google Scholar 

  • Sun M, Liu Z, Yu Z (2000) Characterization of the insecticidal crystal protein genes of Bacillus thuringiensis YBT-1520. Wei Sheng Wu Xue Bao 40(4):365–371

    PubMed  CAS  Google Scholar 

  • Thomas MG, Chan YA, Ozanick SG (2003) Deciphering tuberactinomycin biosynthesis: isolation, sequencing and annotation of the viomycin biosynthetic gene cluster. Antimicrob Agents Chemother 9:2823–2830

    Article  CAS  Google Scholar 

  • Wu K, Chung L, Revill WP, Katz L, Reeves CD (2000) The FK520 gene cluster of Streptomyces hygroscopicus var. ascomyceticus (ATCC 14891) contains genes for biosynthesis of unusual polyketide extender units. Gene 251:81–90

    Article  PubMed  CAS  Google Scholar 

Download references

Acknowledgments

We thank Meizhong Luo for his helpful advice on library construction and Jo Handelsman for providing B. cereus strains UW85 and UW56. This project was supported by the National High Technology Research & Development Program (863 Program) of China (2006AA02Z174) and the National Basic Research Program (973 Program) of China (2003CB114201).

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Ming Sun.

Rights and permissions

Reprints and permissions

About this article

Cite this article

Zhao, C., Luo, Y., Song, C. et al. Identification of three Zwittermicin A biosynthesis-related genes from Bacillus thuringiensis subsp. kurstaki strain YBT-1520. Arch Microbiol 187, 313–319 (2007). https://doi.org/10.1007/s00203-006-0196-3

Download citation

  • Received:

  • Revised:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s00203-006-0196-3

Keywords

Navigation