Abstract
Transcription factors (TFs) participate in a wide range of cellular processes due to their inherent function as essential regulatory proteins. Their dysfunction has been linked to numerous human diseases. The forkhead box (FOX) family of TFs belongs to the “winged helix” superfamily, consisting of proteins sharing a related winged helix-turn-helix DNA-binding motif. FOX genes have been extensively present during vertebrates and invertebrates’ evolution, participating in numerous molecular cascades and biological functions, such as embryonic development and organogenesis, cell cycle regulation, metabolism control, stem cell niche maintenance, signal transduction, and many others. FOXD1, a forkhead TF, has been related to different key biological processes such as kidney and retina development and embryo implantation. FOXD1 dysfunction has been linked to different pathologies, thereby constituting a diagnostic biomarker and a promising target for future therapies. This paper aims to present, for the first time, a comprehensive review of FOXD1’s role in mouse development and human disease. Molecular, structural, and functional aspects of FOXD1 are presented in light of physiological and pathogenic conditions, including its role in human disease aetiology, such as cancer and recurrent pregnancy loss. Taken together, the information given here should enable a better understanding of FOXD1 function for basic science researchers and clinicians.
Similar content being viewed by others
References
Lee TI, Young RA (2013) Transcriptional regulation and its misregulation in disease. Cell 152:1237–1251
Fuda NJ, Ardehali MB, Lis JT (2009) Defining mechanisms that regulate RNA polymerase II transcription in vivo. Nature 461:186–192
Zhou Q, Li T, Price DH (2012) RNA polymerase II elongation control. Annu Rev Biochem 81:119–143
Siggers T, Duyzend MH, Reddy J, Khan S, Bulyk ML (2011) Non-DNA-binding cofactors enhance DNA-binding specificity of a transcriptional regulatory complex. Mol Syst Biol 7:555
Slattery M, Riley T, Liu P, Abe N, Gomez-Alcala P, Dror I, Zhou T, Rohs R, Honig B, Bussemaker HJ, Mann RS (2011) Cofactor binding evokes latent differences in DNA binding specificity between Hox proteins. Cell 147:1270–1282
Spitz F, Furlong EEM (2012) Transcription factors: from enhancer binding to developmental control. Nat Rev Genet 13:613–626
Smith NC, Matthews JM (2016) Mechanisms of DNA-binding specificity and functional gene regulation by transcription factors. Curr Opin Struct Biol 38:68–74
Schleif RF (2013) Modulation of DNA binding by gene-specific transcription factors. Biochemistry 52:6755–6765
Adachi K, Schöler HR (2012) Directing reprogramming to pluripotency by transcription factors. Curr Opin Genet Dev 22:416–422
Lambert SA, Jolma A, Campitelli LF, Das PK, Yin Y, Albu M, Chen X, Taipale J, Hughes TR, Weirauch MT (2018) The human transcription factors. Cell 172:650–665
Osório J (2016) Gene regulation: landscape and mechanisms of transcription factor cooperativity. Nat Rev Genet 17:5
Yusuf D, Butland SL, Swanson MI, Bolotin E, Ticoll A, Cheung WA, Cindy Zhang X, Dickman CTD, Fulton DL, Lim JS, Schnabl JM, Ramos OHP, Vasseur-Cognet M, de Leeuw CN, Simpson EM, Ryffel GU, Lam EWF, Kist R, Wilson MSC, Marco-Ferreres R, Brosens JJ, Beccari LL, Bovolenta P, Benayoun BA, Monteiro LJ, Schwenen HDC, Grontved L, Wederell E, Mandrup S, Veitia RA, Chakravarthy H, Hoodless PA, Mancarelli MM, Torbett BE, Banham AH, Reddy SP, Cullum RL, Liedtke M, Tschan MP, Vaz M, Rizzino A, Zannini M, Frietze S, Farnham PJ, Eijkelenboom A, Brown PJ, Laperrière D, Leprince D, de Cristofaro T, Prince KL, Putker M, del Peso L, Camenisch G, Wenger RH, Mikula M, Rozendaal M, Mader S, Ostrowski J, Rhodes SJ, van Rechem C, Boulay G, Olechnowicz SWZ, Breslin MB, Lan MS, Nanan KK, Wegner M, Hou J, Mullen RD, Colvin SC, Noy P, Webb CF, Witek ME, Ferrell S, Daniel JM, Park J, Waldman SA, Peet DJ, Taggart M, Jayaraman PS, Karrich JJ, Blom B, Vesuna F, O'Geen H, Sun Y, Gronostajski RM, Woodcroft MW, Hough MR, Chen E, Europe-Finner GN, Karolczak-Bayatti M, Bailey J, Hankinson O, Raman V, LeBrun DP, Biswal S, Harvey CJ, DeBruyne JP, Hogenesch JB, Hevner RF, Héligon C, Luo XM, Blank M, Millen K, Sharlin DS, Forrest D, Dahlman-Wright K, Zhao C, Mishima Y, Sinha S, Chakrabarti R, Portales-Casamar E, Sladek FM, Bradley PH, Wasserman WW (2012) The transcription factor encyclopedia. Genome Biol 13:R24
Deplancke B, Alpern D, Gardeux V (2016) The genetics of transcription factor DNA binding variation. Cell 166:538–554
Vaquerizas JM, Kummerfeld SK, Teichmann SA, Luscombe NM (2009) A census of human transcription factors: function, expression and evolution. Nat Rev Genet 10:252–263
Fulton DL, Sundararajan S, Badis G, Hughes TR, Wasserman WW, Roach JC, Sladek R (2009) TFCat: the curated catalog of mouse and human transcription factors. Genome Biol 10:R29
Wingender E, Schoeps T, Haubrock M, Dönitz J (2015) TFClass: a classification of human transcription factors and their rodent orthologs. Nucleic Acids Res 43:D97–D102
Ehsani R, Bahrami S, Drabløs F (2016) Feature-based classification of human transcription factors into hypothetical sub-classes related to regulatory function. BMC Bioinformatics 17:459
Hannenhalli S, Kaestner KH (2009) The evolution of Fox genes and their role in development and disease. Nat Rev Genet 10:233–240
Golson ML, Kaestner KH (2016) Fox transcription factors: from development to disease. Development 143:4558–4570
Laissue P, Vinci G, Veitia RA, Fellous M (2008) Recent advances in the study of genes involved in non-syndromic premature ovarian failure. Mol Cell Endocrinol 282:101–111
Martins R, Lithgow GJ, Link W (2016) Long live FOXO: unraveling the role of FOXO proteins in aging and longevity. Aging Cell 15:196–207
Benayoun BA, Caburet S, Veitia RA (2011) Forkhead transcription factors: key players in health and disease. Trends Genet 27:224–232
Le Fevre AK, Taylor S, Malek NH et al (2013) FOXP1 mutations cause intellectual disability and a recognizable phenotype. Am J Med Genet A 161:3166–3175
Webb AE, Brunet A (2014) FOXO transcription factors: key regulators of cellular quality control. Trends Biochem Sci 39:159–169
Coomans de Brachène A, Demoulin J-B (2016) FOXO transcription factors in cancer development and therapy. Cell Mol Life Sci 73:1159–1172
Maiese K (2016) Forkhead transcription factors: new considerations for Alzheimer’s disease and dementia. J Transl Sci 2:241–247
Siper PM, De Rubeis S, Trelles MDP et al (2017) Prospective investigation of FOXP1 syndrome. Mol Autism 8:57
Elzaiat M, Todeschini A-L, Caburet S, Veitia RA (2017) The genetic make-up of ovarian development and function: the focus on the transcription factor FOXL2. Clin Genet 91:173–182
Link W, Fernandez-Marcos PJ (2017) FOXO transcription factors at the interface of metabolism and cancer. Int J Cancer 141:2379–2391
Weigel D, Jürgens G, Küttner F, Seifert E, Jäckle H (1989) The homeotic gene fork head encodes a nuclear protein and is expressed in the terminal regions of the Drosophila embryo. Cell 57:645–658
Lai E, Prezioso VR, Smith E, Litvin O, Costa RH, Darnell JE (1990) HNF-3A, a hepatocyte-enriched transcription factor of novel structure is regulated transcriptionally. Genes Dev 4:1427–1436
Clark KL, Halay ED, Lai E, Burley SK (1993) Co-crystal structure of the HNF-3/fork head DNA-recognition motif resembles histone H5. Nature 364:412–420
Katoh M, Katoh M (2004) Human FOX gene family (review). Int J Oncol 25:1495–1500
Shimeld SM, Degnan B, Luke GN (2010) Evolutionary genomics of the Fox genes: origin of gene families and the ancestry of gene clusters. Genomics 95:256–260
Georges AB, Benayoun BA, Caburet S, Veitia RA (2010) Generic binding sites, generic DNA-binding domains: where does specific promoter recognition come from? FASEB J 24:346–356
Laissue P, Lakhal B, Vatin M, Batista F, Burgio G, Mercier E, Santos ED, Buffat C, Sierra-Diaz DC, Renault G, Montagutelli X, Salmon J, Monget P, Veitia RA, Méhats C, Fellous M, Gris JC, Cocquet J, Vaiman D (2016) Association of FOXD1 variants with adverse pregnancy outcomes in mice and humans. Open Biol 6:160109
Everson JL, Fink DM, Yoon JW, Leslie EJ, Kietzman HW, Ansen-Wilson LJ, Chung HM, Walterhouse DO, Marazita ML, Lipinski RJ (2017) Sonic hedgehog regulation of Foxf2 promotes cranial neural crest mesenchyme proliferation and is disrupted in cleft lip morphogenesis. Development 144:2082–2091
Leslie EJ, Liu H, Carlson JC, Shaffer JR, Feingold E, Wehby G, Laurie CA, Jain D, Laurie CC, Doheny KF, McHenry T, Resick J, Sanchez C, Jacobs J, Emanuele B, Vieira AR, Neiswanger K, Standley J, Czeizel AE, Deleyiannis F, Christensen K, Munger RG, Lie RT, Wilcox A, Romitti PA, Field LL, Padilla CD, Cutiongco-de la Paz EMC, Lidral AC, Valencia-Ramirez LC, Lopez-Palacio AM, Valencia DR, Arcos-Burgos M, Castilla EE, Mereb JC, Poletta FA, Orioli IM, Carvalho FM, Hecht JT, Blanton SH, Buxó CJ, Butali A, Mossey PA, Adeyemo WL, James O, Braimah RO, Aregbesola BS, Eshete MA, Deribew M, Koruyucu M, Seymen F, Ma L, de Salamanca JE, Weinberg SM, Moreno L, Cornell RA, Murray JC, Marazita ML (2016) A genome-wide association study of nonsyndromic cleft palate identifies an etiologic missense variant in GRHL3. Am J Hum Genet 98:744–754
Moreno LM, Mansilla MA, Bullard SA, Cooper ME, Busch TD, Machida J, Johnson MK, Brauer D, Krahn K, Daack-Hirsch S, L’Heureux J, Valencia-Ramirez C, Rivera D, López AM, Moreno MA, Hing A, Lammer EJ, Jones M, Christensen K, Lie RT, Jugessur A, Wilcox AJ, Chines P, Pugh E, Doheny K, Arcos-Burgos M, Marazita ML, Murray JC, Lidral AC (2009) FOXE1 association with both isolated cleft lip with or without cleft palate, and isolated cleft palate. Hum Mol Genet 18:4879–4896
Lammer EJ, Mohammed N, Iovannisci DM, Ma C, Lidral AC, Shaw GM (2016) Genetic variation of FOXE1 and risk for orofacial clefts in a California population. Am J Med Genet A 170:2770–2776
Mohamad Shah NS, Salahshourifar I, Sulong S, Wan Sulaiman WA, Halim AS (2016) Discovery of candidate genes for nonsyndromic cleft lip palate through genome-wide linkage analysis of large extended families in the Malay population. BMC Genet 17:39
Lennon CJ, Birkeland AC, Nuñez JAP, Su GH, Lanzano P, Guzman E, Celis K, Eisig SB, Hoffman D, Rendon MTG, Ostos H, Chung WK, Haddad J Jr (2012) Association of candidate genes with nonsyndromic clefts in Honduran and Colombian populations. Laryngoscope 122:2082–2087
Bahuau M, Houdayer C, Tredano M, Soupre V, Couderc R, Vazquez MP (2002) FOXC2 truncating mutation in distichiasis, lymphedema, and cleft palate. Clin Genet 62:470–473
Ozturk F, Li Y, Zhu X, Guda C, Nawshad A (2013) Systematic analysis of palatal transcriptome to identify cleft palate genes within TGFβ3-knockout mice alleles: RNA-Seq analysis of TGFβ3 mice. BMC Genomics 14:113
Hatini V, Tao W, Lai E (1994) Expression of winged helix genes, BF-1 and BF-2, define adjacent domains within the developing forebrain and retina. J Neurobiol 25:1293–1309
Ernstsson S, Pierrou S, Hulander M, Cederberg A, Hellqvist M, Carlsson P, Enerbäck S (1996) Characterization of the human forkhead gene FREAC-4. Evidence for regulation by Wilms’ tumor suppressor gene (WT-1) and p53. J Biol Chem 271:21094–21099
Feng D, YE X, Zhu Z et al (2015) Comparative transcriptome analysis between metastatic and non-metastatic gastric cancer reveals potential biomarkers. Mol Med Rep 11:386–392
Gao Y-F, Zhu T, Mao X-Y, Mao CX, Li L, Yin JY, Zhou HH, Liu ZQ (2017) Silencing of Forkhead box D1 inhibits proliferation and migration in glioma cells. Oncol Rep 37:1196–1202
Gumbel JH, Patterson EM, Owusu SA, Kabat BE, Jung DO, Simmons J, Hopkins T, Ellsworth BS (2012) The forkhead transcription factor, Foxd1, is necessary for pituitary luteinizing hormone expression in mice. PLoS One 7:1–10
Hatini V, Huh SO, Herzlinger D, Soares VC, Lai E (1996) Essential role of stromal mesenchyme in kidney morphogenesis revealed by targeted disruption of winged helix transcription factor BF-2. Genes Dev 10:1467–1478
Herrera E, Marcus R, Li S, Williams SE, Erskine L, Lai E, Mason C (2004) Foxd1 is required for proper formation of the optic chiasm. Development 131:5727–5739
van der Heul-Nieuwenhuijsen L, Dits NF, Jenster G (2009) Gene expression of forkhead transcription factors in the normal and diseased human prostate. BJU Int 103:1574–1580
Hung C, Linn G, Chow YH, Kobayashi A, Mittelsteadt K, Altemeier WA, Gharib SA, Schnapp LM, Duffield JS (2013) Role of lung pericytes and resident fibroblasts in the pathogenesis of pulmonary fibrosis. Am J Respir Crit Care Med 188:820–830
Jeong J (2004) Hedgehog signaling in the neural crest cells regulates the patterning and growth of facial primordia. Genes Dev 18:937–951
Ju W, Yoo BC, Kim I-J, Kim JW, Kim SC, Lee HP (2009) Identification of genes with differential expression in chemoresistant epithelial ovarian cancer using high-density oligonucleotide microarrays. Oncol Res 18:47–56
van Mens TE, Liang H-PH, Basu S, Hernandez I, Zogg M, May J, Zhan M, Yang Q, Foeckler J, Kalloway S, Sood R, Karlson CS, Weiler H (2017) Variable phenotypic penetrance of thrombosis in adult mice after tissue-selective and temporally controlled Thbd gene inactivation. Blood Adv 1:1148–1158
Kobayashi A, Mugford JW, Krautzberger AM, Naiman N, Liao J, McMahon AP (2014) Identification of a multipotent self-renewing stromal progenitor population during mammalian kidney organogenesis. Stem Cell Reports 3:650–662
Levinson RS (2005) Foxd1-dependent signals control cellularity in the renal capsule, a structure required for normal renal development. Development 132:529–539
Millington G, Elliott KH, Y-TT C et al (2017) Cilia-dependent GLI processing in neural crest cells is required for tongue development. Dev Biol 424:124–137
Nagel S, Meyer C, Kaufmann M, Drexler HG, MacLeod RAF (2014) Deregulated FOX genes in Hodgkin lymphoma. Genes Chromosom Cancer 53:917–933
Nakayama S, Soejima K, Yasuda H, Yoda S, Satomi R, Ikemura S, Terai H, Sato T, Yamaguchi N, Hamamoto J, Arai D, Ishioka K, Ohgino K, Naoki K, Betsuyaku T (2015) FOXD1 expression is associated with poor prognosis in non-small cell lung cancer. Anticancer Res 35:261–268
Newman EA, Kim DW, Wan J, Wang J, Qian J, Blackshaw S (2018) Foxd1 is required for terminal differentiation of anterior hypothalamic neuronal subtypes. Dev Biol 439:102–111
Xu G, Li K, Zhang N, Zhu B, Feng G (2016) Screening driving transcription factors in the processing of gastric cancer. Gastroenterol Res Pract 2016:1–9
Yeo HC, Ting S, Brena RM, Koh G, Chen A, Toh SQ, Lim YM, Oh SKW, Lee DY (2016) Genome-wide transcriptome and binding sites analyses identify early FOX expressions for enhancing cardiomyogenesis efficiency of hESC cultures. Sci Rep 6:31068
Zhang H, Palmer R, Gao X, Kreidberg J, Gerald W, Hsiao L, Jensen RV, Gullans SR, Haber DA (2003) Transcriptional activation of placental growth factor by the forkhead/winged helix transcription factor FoxD1. Curr Biol 13:1625–1629
Zhang Y, Wang T, Wang S, Xiong Y, Zhang R, Zhang X, Zhao J, Yang AG, Wang L, Jia L (2018) Nkx2-2as suppression contributes to the pathogenesis of sonic hedgehog medulloblastoma. Cancer Res 78:962–973
Baek J-I, Choi SY, Chacon-Heszele MF, Zuo X, Lipschutz JH (2014) Expression of Drosophila forkhead transcription factors during kidney development. Biochem Biophys Res Commun 446:15–17
Zhao M, Zhou Y, Zhu B, Wan M, Jiang T, Tan Q, Liu Y, Jiang J, Luo S, Tan Y, Wu H, Renauer P, del Mar Ayala Gutiérrez M, Castillo Palma MJ, Ortega Castro R, Fernández-Roldán C, Raya E, Faria R, Carvalho C, Alarcón-Riquelme ME, Xiang Z, Chen J, Li F, Ling G, Zhao H, Liao X, Lin Y, Sawalha AH, Lu Q (2016) IFI44L promoter methylation as a blood biomarker for systemic lupus erythematosus. Ann Rheum Dis 75:1998–2006
Zhou H, Lv Q, Guo Z (2018) Transcriptomic signature predicts the distant relapse in patients with ER+ breast cancer treated with tamoxifen for five years. Mol Med Rep 17:3152–3157
Carreres MI, Escalante A, Murillo B, Chauvin G, Gaspar P, Vegar C, Herrera E (2011) Transcription factor Foxd1 is required for the specification of the temporal retina in mammals. J Neurosci 31:5673–5681
Cederberg A, Hulander M, Carlsson P, Enerbäck S (1999) The kidney-expressed winged helix transcription factor FREAC-4 is regulated by Ets-1: a possible role in kidney development. J Biol Chem 274:165–169
Cheng P, Wang J, Waghmare I, Sartini S, Coviello V, Zhang Z, Kim SH, Mohyeldin A, Pavlyukov MS, Minata M, Valentim CLL, Chhipa RR, Bhat KPL, Dasgupta B, la Motta C, Kango-Singh M, Nakano I (2016) FOXD1-ALDH1A3 signaling is a determinant for the self-renewal and tumorigenicity of mesenchymal glioma stem cells. Cancer Res 76:7219–7230
Koga M, Matsuda M, Kawamura T, Sogo T, Shigeno A, Nishida E, Ebisuya M (2014) Foxd1 is a mediator and indicator of the cell reprogramming process. Nat Commun 5:1–9
Fetting JL, Guay JA, Karolak MJ, Iozzo RV, Adams DC, Maridas DE, Brown AC, Oxburgh L (2014) FOXD1 promotes nephron progenitor differentiation by repressing decorin in the embryonic kidney. Development 141:17–27
Zhao Y-F, Zhao J-Y, Yue H, Hu KS, Shen H, Guo ZG, Su XJ (2015) FOXD1 promotes breast cancer proliferation and chemotherapeutic drug resistance by targeting p27. Biochem Biophys Res Commun 456:232–237
Song R, Lopez MLSS, Yosypiv IV (2017) Foxd1 is an upstream regulator of the renin-angiotensin system during metanephric kidney development. Pediatr Res 82:855–862
Yuasa J, Hirano S, Yamagata M, Noda M (1996) Visual projection map specified by topographic expression of transcription factors in the retina. Nature 382:632–635
Dahle MK, Grønning LM, Cederberg A, Blomhoff HK, Miura N, Enerbäck S, Taskén KA, Taskén K (2002) Mechanisms of FOXC2- and FOXD1-mediated regulation of the RI alpha subunit of cAMP-dependent protein kinase include release of transcriptional repression and activation by protein kinase B alpha and cAMP. J Biol Chem 277:22902–22908
Berg DT, Myers LJ, Richardson MA, Sandusky G, Grinnell BW (2005) Smad6s regulates plasminogen activator inhibitor-1 through a protein kinase C-β-dependent up-regulation of transforming growth factor-β. J Biol Chem 280:14943–14947
Takahashi H, Sakuta H, Shintani T, Noda M (2009) Functional mode of FoxD1/CBF2 for the establishment of temporal retinal specificity in the developing chick retina. Dev Biol 331:300–310
Fink DM, Sun MR, Heyne GW, Everson JL, Chung HM, Park S, Sheets MD, Lipinski RJ (2018) Coordinated d-cyclin/Foxd1 activation drives mitogenic activity of the sonic hedgehog signaling pathway. Cell Signal 44:1–9
Piscione TD, Waters AM (2008) Structural and functional development of the kidney. In: Geary DF, Schaefer F (eds) Comprehensive pediatric nephrology, Mosby, Philadelphia, pp 91–129. https://doi.org/10.1016/B978-0-323-04883-5.50012-X
Hendry C, Rumballe B, Moritz K, Little MH (2011) Defining and redefining the nephron progenitor population. Pediatr Nephrol 26:1395–1406
Mugford JW, Sipilä P, McMahon JA, McMahon AP (2008) Osr1 expression demarcates a multi-potent population of intermediate mesoderm that undergoes progressive restriction to an Osr1-dependent nephron progenitor compartment within the mammalian kidney. Dev Biol 324:88–98
Li W, Hartwig S, Rosenblum ND (2014) Developmental origins and functions of stromal cells in the normal and diseased mammalian kidney. Dev Dyn 243:853–863
Davies J (2017) Pax2: a “keep to the path” sign on Waddington’s epigenetic landscape. Dev Cell 41:331–332
Nagy II, Xu Q, Naillat F et al (2016) Impairment of Wnt11 function leads to kidney tubular abnormalities and secondary glomerular cystogenesis. BMC Dev Biol 16:30
Paroly SS, Wang F, Spraggon L, Merregaert J, Batourina E, Tycko B, Schmidt-Ott KM, Grimmond S, Little M, Mendelsohn C (2013) Stromal protein Ecm1 regulates ureteric bud patterning and branching. PLoS One 8:e84155
Yallowitz AR, Hrycaj SM, Short KM, Smyth IM, Wellik DM (2011) Hox10 genes function in kidney development in the differentiation and integration of the cortical stroma. PLoS One 6:e23410
Hum S, Rymer C, Schaefer C, Bushnell D, Sims-Lucas S (2014) Ablation of the renal stroma defines its critical role in nephron progenitor and vasculature patterning. PLoS One 9:e88400
Mukherjee E, Maringer KV, Papke E et al (2017) Endothelial markers expressing stromal cells are critical for kidney formation. Am J Physiol Ren Physiol. https://doi.org/10.1152/ajprenal.00136.2017
Sequeira-Lopez MLS, Lin EE, Li M, Hu Y, Sigmund CD, Gomez RA (2015) The earliest metanephric arteriolar progenitors and their role in kidney vascular development. Am J Phys Regul Integr Comp Phys 308:R138–R149
Humphreys BD, Lin S-L, Kobayashi A, Hudson TE, Nowlin BT, Bonventre JV, Valerius MT, McMahon AP, Duffield JS (2010) Fate tracing reveals the pericyte and not epithelial origin of myofibroblasts in kidney fibrosis. Am J Pathol 176:85–97
Chang YT, Yang CC, Pan SY, Chou YH, Chang FC, Lai CF, Tsai MH, Hsu HL, Lin CH, Chiang WC, Wu MS, Chu TS, Chen YM, Lin SL (2016) DNA methyltransferase inhibition restores erythropoietin production in fibrotic murine kidneys. J Clin Invest 126:721–731
Ohmori T, Tanigawa S, Kaku Y, Fujimura S, Nishinakamura R (2015) Sall1 in renal stromal progenitors non-cell autonomously restricts the excessive expansion of nephron progenitors. Sci Rep 5:1–11
Gomez IG, Duffield JS (2014) The FOXD1 lineage of kidney perivascular cells and myofibroblasts: functions and responses to injury. Kidney Int Suppl 4:26–33
Kobayashi H, Liu Q, Binns TC, Urrutia AA, Davidoff O, Kapitsinou PP, Pfaff AS, Olauson H, Wernerson A, Fogo AB, Fong GH, Gross KW, Haase VH (2016) Distinct subpopulations of FOXD1 stroma-derived cells regulate renal erythropoietin. J Clin Invest 126:1926–1938
Fanni D, Gerosa C, Vinci L, Ambu R, Dessì A, Eyken PV, Fanos V, Faa G (2016) Interstitial stromal progenitors during kidney development: here, there and everywhere. J Matern Fetal Neonatal Med 29:1–6
Junttila S, Saarela U, Halt K, Manninen A, Parssinen H, Lecca MR, Brandli AW, Sims-Lucas S, Skovorodkin I, Vainio SJ (2015) Functional genetic targeting of embryonic kidney progenitor cells ex vivo. J Am Soc Nephrol 26:1126–1137
Sims-Lucas S, Schaefer C, Bushnell D, Ho J, Logar A, Prochownik E, Gittes G, Bates CM (2013) Endothelial progenitors exist within the kidney and lung mesenchyme. PLoS One 8:1–8
Lemos DR, Marsh G, Huang A, Campanholle G, Aburatani T, Dang L, Gomez I, Fisher K, Ligresti G, Peti-Peterdi J, Duffield JS (2016) Maintenance of vascular integrity by pericytes is essential for normal kidney function. Am J Physiol Ren Physiol 311:F1230–F1242
Gerl K, Steppan D, Fuchs M, Wagner C, Willam C, Kurtz A, Kurt B (2017) Activation of hypoxia signaling in stromal progenitors impairs kidney development. Am J Pathol 187:1496–1511
Lin EE, Sequeira-Lopez MLS, Gomez RA (2014) RBP-J in FOXD1+ renal stromal progenitors is crucial for the proper development and assembly of the kidney vasculature and glomerular mesangial cells. Am J Physiol Renal Physiol 306:F249–F258
Boyle SC, Liu Z, Kopan R (2014) Notch signaling is required for the formation of mesangial cells from a stromal mesenchyme precursor during kidney development. Development 141:346–354
Duffield JS, Humphreys BD (2011) Origin of new cells in the adult kidney: results from genetic labeling techniques. Kidney Int 79:494–501
Schrimpf C, Duffield JS (2011) Mechanisms of fibrosis: the role of the pericyte. Curr Opin Nephrol Hypertens 20:297–305
Nakagawa N, Duffield JS (2013) Myofibroblasts in fibrotic kidneys. Curr Pathobiol Rep 1:189–198
Duffield JS (2014) Cellular and molecular mechanisms in kidney fibrosis. J Clin Invest 124:2299–2306
Erskine L, Herrera E (2014) Connecting the retina to the brain. ASN Neuro 6:175909141456210
Zhou ZJ, McCall MA (2008) Retinal ganglion cells in model organisms: development, function and disease. J Physiol 586:4343–4345
Sernagor E, Eglen SJ, Wong RO (2001) Development of retinal ganglion cell structure and function. Prog Retin Eye Res 20:139–174
Sanes JR, Masland RH (2015) The types of retinal ganglion cells: current status and implications for neuronal classification. Annu Rev Neurosci 38:221–246
Petros TJ, Rebsam A, Mason CA (2008) Retinal axon growth at the optic chiasm: to cross or not to cross. Annu Rev Neurosci 31:295–315
Austin CP, Feldman DE, Ida JA, Cepko CL (1995) Vertebrate retinal ganglion cells are selected from competent progenitors by the action of Notch. Development 121:3637–3650
Henrique D, Hirsinger E, Adam J, Roux IL, Pourquié O, Ish-Horowicz D, Lewis J (1997) Maintenance of neuroepithelial progenitor cells by Delta-Notch signalling in the embryonic chick retina. Curr Biol 7:661–670
Esteve P, Sandonìs A, Cardozo M, Malapeira J, Ibañez C, Crespo I, Marcos S, Gonzalez-Garcia S, Toribio ML, Arribas J, Shimono A, Guerrero I, Bovolenta P (2011) SFRPs act as negative modulators of ADAM10 to regulate retinal neurogenesis. Nat Neurosci 14:562–569
Maurer KA, Riesenberg AN, Brown NL (2014) Notch signaling differentially regulates Atoh7 and Neurog2 in the distal mouse retina. Development 141:3243–3254
Pacal M, Bremner R (2014) Induction of the ganglion cell differentiation program in human retinal progenitors before cell cycle exit. Dev Dyn 243:712–729
Prasov L, Glaser T (2012) Dynamic expression of ganglion cell markers in retinal progenitors during the terminal cell cycle. Mol Cell Neurosci 50:160–168
Pratt T (2004) The winged helix transcription factor Foxg1 facilitates retinal ganglion cell axon crossing of the ventral midline in the mouse. Development 131:3773–3784
Herrera E, Brown L, Aruga J et al (2003) Zic2 patterns binocular vision by specifying the uncrossed retinal projection. Cell 114:545–557
Williams SE, Mann F, Erskine L, Sakurai T, Wei S, Rossi DJ, Gale NW, Holt CE, Mason CA, Henkemeyer M (2003) Ephrin-B2 and EphB1 mediate retinal axon divergence at the optic chiasm. Neuron 39:919–935
Tian NM, Pratt T, Price DJ (2008) Foxg1 regulates retinal axon pathfinding by repressing an ipsilateral program in nasal retina and by causing optic chiasm cells to exert a net axonal growth-promoting activity. Development 135:4081–4089
Sanchez-Arrones L, Nieto-Lopez F, Sanchez-Camacho C, Carreres MI, Herrera E, Okada A, Bovolenta P (2013) Shh/Boc signaling is required for sustained generation of ipsilateral projecting ganglion cells in the mouse retina. J Neurosci 33:8596–8607
Wang Q, Marcucci F, Cerullo I, Mason C (2016) Ipsilateral and contralateral retinal ganglion cells express distinct genes during decussation at the optic chiasm. eNeuro 3. https://doi.org/10.1523/ENEURO.0169-16.2016
Hernández-Bejarano M, Gestri G, Spawls L, Nieto-López F, Picker A, Tada M, Brand M, Bovolenta P, Wilson SW, Cavodeassi F (2015) Opposing Shh and Fgf signals initiate nasotemporal patterning of the zebrafish retina. Development 142:3933–3942
Mariani FV, Harland RM (1998) XBF-2 is a transcriptional repressor that converts ectoderm into neural tissue. Development 125:5019–5031
Yaklichkin S, Vekker A, Stayrook S, Lewis M, Kessler DS (2007) Prevalence of the EH1 Groucho interaction motif in the metazoan Fox family of transcriptional regulators. BMC Genomics 8:201
Myatt SS, Lam EW-F (2007) The emerging roles of forkhead box (Fox) proteins in cancer. Nat Rev Cancer 7:847–859
Lakhal B, Philibert P, Laissue P, Benayoun B, Dipietromaria A, Braham R, Elghezal H, Saad A, Feellous M, Veitia RA, Sultan C (2009) Molecular genetics of secondary amenorrhea: functional analysis of an heterozygous variant of FOX-L2 gene (G187D) supports its involvement in non-syndromic premature ovarian failure. Horm Res 72:54–54
Katoh M, Igarashi M, Fukuda H, Nakagama H, Katoh M (2013) Cancer genetics and genomics of human FOX family genes. Cancer Lett 328:198–206
Chen J, Qian Z, Li F, Li J, Lu Y (2017) Integrative analysis of microarray data to reveal regulation patterns in the pathogenesis of hepatocellular carcinoma. Gut Liver 11:112–120
Cha J, Sun X, Dey SK (2012) Mechanisms of implantation: strategies for successful pregnancy. Nat Med 18:1754–1767
Koot YEM, Teklenburg G, Salker MS, Brosens JJ, Macklon NS (2012) Molecular aspects of implantation failure. Biochim Biophys Acta 1822:1943–1950
White MD, Plachta N (2015) How adhesion forms the early mammalian embryo. Curr Top Dev Biol 112:1–17
L’Hôte D, Serres C, Laissue P et al (2007) Centimorgan-range one-step mapping of fertility traits using interspecific recombinant congenic mice. Genetics 176:1907–1921
Burgio G, Szatanik M, J-LL G et al (2007) Interspecific recombinant congenic strains between C57BL/6 and mice of the Mus spretus species: a powerful tool to dissect genetic control of complex traits. Genetics 177:2321–2333
Laissue P, Burgio G, L’Hôte D et al (2009) Identification of quantitative trait loci responsible for embryonic lethality in mice assessed by ultrasonography. Int J Dev Biol 53:623–629
Laissue P, L’Hôte D, Serres C, Vaiman D (2009) Mouse models for identifying genes modulating fertility parameters. Animal 3:55–71
L’Hôte D, Laissue P, Serres C et al (2010) Interspecific resources: a major tool for quantitative trait locus cloning and speciation research. BioEssays 32:132–142
Vatin M, Burgio G, Renault G, Laissue P, Firlej V, Mondon F, Montagutelli X, Vaiman D, Serres C, Ziyyat A (2012) Refined mapping of a quantitative trait locus on chromosome 1 responsible for mouse embryonic death. PLoS One 7:e43356. https://doi.org/10.1371/journal.pone.0043356
Funding
The present study was supported by the Universidad del Rosario (Grant CS/Genetics/ABN062-2018). Laissue’s lab is supported by the Universidad del Rosario.
Author information
Authors and Affiliations
Corresponding author
Ethics declarations
Conflict of interest
The authors declare that they have no conflict of interest.
Electronic supplementary material
Supplementary Fig. S1.
FOXD1 interspecific alignment (Homo sapiens and Mus musculus). An alignment with the nucleotide and amino acid sequences from human and mouse are shown. FOXD1 protein consists of 465 and 456 amino acids in mouse and human, respectively. The bold letters within the purple box indicate the conserved DBD sequence between both species. The yellow and blue boxes show the poly-Ala and poly-Pro stretches, respectively, located within the COOH-terminal domain. (PDF 263 kb)
Rights and permissions
About this article
Cite this article
Quintero-Ronderos, P., Laissue, P. The multisystemic functions of FOXD1 in development and disease. J Mol Med 96, 725–739 (2018). https://doi.org/10.1007/s00109-018-1665-2
Received:
Revised:
Accepted:
Published:
Issue Date:
DOI: https://doi.org/10.1007/s00109-018-1665-2