Abstract
Oriented cellulose deposition is critical to plant patterning and models suggest microtubules constrain cellulose synthase movements through the plasma membrane. Though widespread in plants, urochordates are the only animals that synthesize cellulose. We characterized the distinctive cellulose microfibril scaffold of the larvacean house and its interaction with house structural proteins (oikosins). Targeted disruption of cytoskeletal elements, secretory pathways, and plasma membrane organization, suggested a working model for templating extracellular cellulose microfibrils from animal cells that shows both convergence and differences to plant models. Specialized cortical F-actin arrays template microfibril orientation and glycosylphosphatidylinositol-anchored proteins in lipid rafts may act as scaffolding proteins in microfibril elongation. Microtubules deliver and maintain cellulose synthase complexes to specific cell membrane sites rather than orienting their movement through the membrane. Oikosins are incorporated into house compartments directly above their corresponding cellular field of expression and interact with the cellulose scaffold to a variable extent.
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Introduction
Cellulose is the most abundant natural product in the biosphere. In plants, cellulose plays a key role in structural support and the oriented deposition of cellulose microfibrils is critical to anisotropic growth during development [1]. Ever since their discovery in plants [2], microtubules have been proposed to control the orientation of cellulose microfibril deposition in the cell wall. Most models suggest microtubules constrain movement of cellulose synthase (CesA) complexes in the membrane [1]. An alternative hypothesis postulates that microtubules regulate microfibril length [3] with longer microfibrils providing greater resistance to cell expansion parallel to fiber orientation, thus generating an anisotropic shaping force. Nevertheless, more than 40 years after formulation of a link between microtubules and cellulose fibril deposition, the molecular nature of this link remains unclear and is debated [1].
The ability to synthesize cellulose is also found in prokaryotes and fungi, but is restricted to the urochordate subphylum in animals. Urochordate CesAs have been identified in two ascidians, Ciona savignyi [4], and C. intestinalis [5, 6]. Ascidians possess only one CesA gene, whereas we recently identified duplicated CesA genes (Od-CesA1 and Od-CesA2) in a larvacean Oikopleura dioica, which have evolved distinct temporal and functional specializations [7]. Phylogenetic analyses indicate that urochordates acquired the CesA gene by horizontal transfer from a prokaryote [4–7]. Since molecular phylogenetic data [8] and a filter-feeding hypothesis on urochordate evolution [9] suggest larvaceans branch nearer the base of the chordate lineage than ascidians and thaliaceans, the findings indicate that the urochordate lineage acquired the CesA gene by a single transfer event prior to divergence into three sister classes. Given this probable origin of urochordate CesAs, we were interested to compare mechanisms of cellulose microfibril orientation in animal cells to those currently elucidated in phylogenetically distant plant cells.
Among the three urochordate classes, ascidians and thaliaceans live inside a unique integument, the tunic, containing crystalline cellulose as a structural component, whereas the larvaceans secrete a complex filter-feeding house that surrounds the animal (Fig. 1a, b). The house is initially secreted as a compact rudiment by a specialized oikoplastic epithelium, and several rudiment layers are often observed stacked above the trunk (Fig. 1c). Upon escape of the animal from an inflated house, the outermost rudiment swells and is subsequently expanded by specific movements of the trunk and tail until the entire animal is contained within the mature structure. In the larvacean house, sinusoidal movements of the tail control water flow. Seawater enters the house through an inlet filter (if) that eliminates large particles and those of appropriate size are then trapped in the food-concentrating filter (fcf) and brought to the mouth, where they are ingested with the aid of a mesh secreted by the endostyle. Filtered seawater flows out the exit spout (Fig. 1b). Of the duplicated CesA genes in O. dioica, spatial-temporal expression analysis indicated that the Od-CesA1 produces long cellulose fibrils along the larval tail, which play a role in notochord and tail morphogenesis, whereas Od-CesA2 is involved in the cellulose scaffold of the post-metamorphic filter-feeding house [7]. Repetitive synthesis (every 4 h) of an identical house structure from a transparent, accessible epithelium makes the process of house construction an excellent animal counterpoint to investigation of this developmentally important phenomenon in plants.
Materials and methods
Animal culture
Oikopleura dioica were maintained continuously in culture at 15°C [10].
Confocal analysis of cellulose microfibrils and F-actin filaments
Day 4–5 animals were fixed in 4% paraformaldehyde, 0.1% saponin, 0.1 M MOPS pH 7.5, and 0.5 M NaCl at 4°C overnight. Fixed animals were rinsed with PBS/0.1% saponin/0.1% Tween 20 (S/PBS-T), and then blocked with 3% BSA + S/PBS-T at 4°C overnight. Cellulose content of the house rudiment was probed by incubation in 1% BSA + S/PBS-T containing rCBD-Protein L (10 μg/ml; Fluka) and mouse IgG (10 μg/ml, Sigma) at 4°C overnight, followed by incubation in Rhodamine Red X conjugated goat anti-mouse IgG (1:200 in 1% BSA + S/PBS-T) at 4°C overnight [7]. To analyze cortical F-actin, Alexa Fluor 488 phalloidin (10 units/ml; Molecular Probes) was added to each of the incubation steps. Nuclei were counterstained with 1 µM To-Pro-3 iodide (Molecular Probes). Specimens were mounted in Vectashield (Vector Laboratories) and analyzed with a Leica TCS laser scanning confocal microscope.
Antibodies against oikosins
In addition to the original seven oikosins that were characterized [11, 12], we have now identified an additional 45 oikosins [unpublished observation]. Of the 52 oikosins, six were selected as targets for the generation of polyclonal antibodies. The peptide epitopes used to generate the respective antibodies are given in Table 1. Custom rabbit antisera against oikosins 1 (AJ308491), 2 (AJ308492), and 3 (AJ308495) were made by Washington Biotechnology Inc. (Baltimore, MD) whereas anti-oikosin 8 (FN806849), 18 (FN806850), and 32 (FN806851) rabbit antibodies were generated by 21st Century Biochemicals (Marlborough, MA). In the later case, sera were obtained after five consecutive bleeds and antibodies were affinity-purified from the sera.
Western blotting
To collect house rudiments free of contaminating particles, adult animals (day 4–5) were forced out of their houses and transferred to filtered seawater. House rudiments were removed as soon as the animals started expanding them. Aliquots of 50 house rudiments were centrifuged at 12,000 × g for 10 min at 4°C to remove excess seawater and then stored at –80°C. Extraction of the house proteins was performed as previously [11]. The proteins in the extraction were precipitated with 20% trichloroacetic acid/acetone, rinsed with acetone and diethyl ether, and then re-dissolved in loading buffer. The extract was applied onto SDS–PAGE using 5–20% (oikosin 1), 12.5% (oikosins 2 and 3) or 15% (oikosins 8, 18 and 32) acrylamide gels, and transferred onto PVDF membranes (Millipore). Membranes were blocked in 5% skim milk/PBS-T for 1 h at room temperature. Target proteins were probed with anti-oikosin 1, 2, and 3 rabbit sera (1:1,000) or anti-oikosin 8, 18, 32 rabbit antibodies (1:1,000) in the blocking solution overnight at 4°C. Membranes were washed three times in PBS-T, and then incubated with anti-rabbit IgG (Jackson Immunoresearch) conjugated HRP (1:15,000) for 1 h at room temperature. Membranes were washed three times in PBS-T, and processed using ECL + (GE Healthcare).
In situ hybridizations and immunostainings
Whole mount in situ hybridizations for oikosins and fluorescent whole mount in situ hybridization for CesA2 were performed as previously [7, 13] using probes described in Supplementary Table 1. To localize oikosins in the pre-house structure, day 4 animals were fixed in 4% paraformaldehyde/0.1 M MOPS pH 7.5/0.5 M NaCl at 4°C overnight. Fixed animals were rinsed with PBS/0.1% Tween 20 (PBS-T), and then blocked with 3% BSA + PBS-T at 4°C overnight. Samples were incubated at 4°C overnight with antisera (1:100 dilution) for oikosin 1–3, and affinity purified antibodies (1:100 dilution) for oikosin 8, 18, and 32 in 3% BSA + PBS-T, washed with PBS-T, post-fixed in 4% paraformaldehyde/0.1 M MOPS pH 7.5/0.5 M NaCl for 30 min at RT, washed as after the first fixation and incubated at 4°C overnight with anti-rabbit IgG conjugated Alexa 568 (1:1,000) in 3% BSA + PBS-T. Samples were washed with PBS-T, incubated 15 min in 1 μM To-Pro-3 iodide to counterstain DNA, and then washed with PBS-T. To analyze cortical F-actin, Alexa Fluor 488 phalloidin (10 units/ml; Molecular Probes) was added to each of incubation steps. Specimens were mounted in Vectashield and analyzed with a Leica TCS laser scanning confocal microscope.
Incubation of animals with anti-oikosin antibodies
Lots of ten day-4 animals were placed into 10-ml volumes of seawater containing respective anti-oikosin (1, 2, 3, 8, 18, and 32) antibodies at 1:100 dilutions, and incubated for 12 h at room temperature with gentle agitation.
Inhibitor assays
Day-3–5 animals (30–50 animals) were transferred into 800 ml of fresh seawater without food containing one of the inhibitory reagents (all from Sigma, except lumicolchicine from ChromaDex Inc.). Dose-response assays to determine effective inhibitor concentrations are summarized in Table 2. Final working concentrations for more detailed analyses were: cytochalasin B (0.8 μM), colchicine (25 μM), lumicolchicine (25 μM), monensin (32 nM), filipin III (0.15 μM), or neomycin (100 μM). Animals were cultured at these concentrations for 4–12 h at room temperature. Final inhibitor concentrations were prepared from stock solutions of 20 mM cytochalasin B in DMSO, 100 mM colchicine in seawater, 50 mM lumicolchicine in ethanol, 7.6 mM filipin III in DMSO, 10 mM monensin in ethanol, and 10 mM neomycin in seawater. To determine whether DMSO or ethanol solvents had any effect on house structure, experiments in which animals were incubated in the corresponding concentrations of the solvents alone were also carried out.
Results and discussion
Components of the filter-feeding house
In O. dioica, the fcf and if are readily identified in pre-house rudiments and superimpose onto the oikoplastic epithelial fields of Fol and Eisen, respectively (Fig. 1d), which secrete components that are specifically incorporated into these filters [11, 12]. The extracellular cellulose microfibrils produced by cellulose synthase complexes encoded by the Od-CesA2 gene are involved in forming a scaffold of the filter-feeding house [7]. Using rCBD-Protein L, we revealed a cellulose-based skeletal structure of the house rudiment of a representative larvacean, O. dioica (Fig. 2a). The fcf was composed of two layers with different mesh sizes, designated U and L (Fig. 2b). Cellulose microfibrils in the L-region were secreted from the anterior Fol to form a fine mesh. The U-region mesh was characterized by a transverse array of filaments secreted by two sets of seven cells flanking the posterior Fol region. The if, secreted above the Eisen region, exhibited a meshwork composed of a single warp and double weft thread (Fig. 2c). The termini of each cellulose bundle branched into smaller fibrils that projected to smaller cells surrounding the giant Eisen cells. The weft thread microfibrils of the if superpose above a transverse apical array of F-actin filaments in the three central giant Eisen cells.
Previous analyses indicated that the house consists of at least 20–30 polypeptides, a number of which are heavily glycosylated [11]. Through protein microsequencing [11, unpublished observation] and representation difference analysis [12], at least 50 genes (oikosins) with distinct, complementary expression patterns restricted to defined regions of the oikoplastic epithelium have been identified. We have now developed antibodies against six of the protein products: anti-oikosins 1, 2, 3, 8, 18, and 32. The antibodies recognize the targeted oikosins on both Western blots (Fig. 3) and whole mount immunofluorescent staining (Fig. 4). Each of the oikosin proteins was incorporated into the pre-house rudiment directly above the cellular fields from which they were produced and no significant migration in the extracellular space was observed for any of the six oikosins tested. Double labeling of cellulose microfibrils and oikosins revealed that oikosins co-localized with cellulose fibrils to a variable extent, with oikosin 2 showing the most complete co-localization, appearing to coat the cellulose microfibers produced in the U compartment of the fcf (Fig. 5). Thus, cellulose microfibers of varying thickness and orientation are produced in the house by a single CesA2 gene. Different oikosins, produced by specific fields of epithelial cells, interact locally with the variable cellulose scaffold to form the defined compartments of the house. Oikosins 1, 2, 3, 8, and 18 are incorporated into the fcf, whereas the distribution of oikosin 32 is consistent with a role in the house shell rather than in filter meshes.
We further attempted to determine if house formation could be disrupted by incubations of the animals in the presence of anti-oikosin antibodies. Under these conditions, no alteration of house structures was observed and animals developed and grew normally. It may be that polyclonal antibodies raised against entire oikosin proteins would be more effective in this strategy than the currently available antibodies raised against defined, short, peptides within each oikosin.
Cytoskeleton-mediated templating of house structures
In distinct contrast to prevailing models in plant cells, confocal image stacks of the nascent if and the underlying giant Eisen cells showed a clear parallelism between nascent cellulose weft fibers and an underlying transverse array of cortical F-actin filaments (Fig. 2c). To assess roles that cytoskeletal and cell membrane components might play in templating the O. dioica house, we employed an array of inhibitors. Dose-response assays were carried out for each inhibitor to determine the effective concentration range (Table 2).
When day 5 animals were cultured for several hours in the presence of 0.8 μM cytochalasin B, a specific disrupter of F-actin formation, the structure of the fcf was clearly perturbed (Fig. 6a). The sheath surrounding the fcf appeared normal but the ordered interior ribbed meshwork was largely absent. At 15°C, O. dioica produces one new house every 4 h throughout the post-metamorphic portion of the life cycle. Thus, the effect of F-actin disruption on house structure occurred within one house synthetic cycle. The effect of this disruption on fcf morphology was reversible (Fig. 6b). When animals were cultured in cytochalasin B for 6 h to disrupt fcf structure and then transferred to seawater in the absence of inhibitor, normal filter morphology was recovered in subsequently synthesized houses. Confocal image stacks of the nascent if and underlying Eisen cells revealed that 0.8 μM of cytochalasin B was sufficient to specifically disrupt the apical transverse array of F-actin that paralleled weft thread microfibril deposition while leaving the basic cellular cortical actin network underlying the cell membrane intact (Fig. 7). Specific disruption of the transverse F-actin array resulted in concomitant disruption of the meshwork of overlying cellulose microfibrils, implicating this array in their ordered deposition. A parallel orientation of extracellular cellulose microfibrils and cortical F-actin has also been noted in the brown algae Dictyota dichotoma [14].
We next examined the effects of microtubule disruption on if morphology. Culture of animals in 25 μM of colchicine had no visible effect on the transverse array of cortical F-actin but did induce a non-uniform width in the size of thread bundles as well as non-uniform spacing between adjacent thread lines (Fig. 7). These effects were observed in both weft- and warp-thread lines. At similar concentrations (25–50 μM), the inactive analog lumicolchicine did not show the same disruption of microfibril patterning, though at 100 μM, epithelial cells detached and became necrotic, suggesting a non-specific general toxic effect of this analog at higher concentrations (Supplementary Fig. 2).
Plant cellulose microfibrils are produced by a terminal multimeric complex of CesA subunits on the plasma membrane [15], and in ascidians, terminal complexes on the plasma membrane of epidermal cells face the tunic [16, 17]. In developing xylem of Arabidopsis, cortical microtubules are continually required to maintain correct CesA localization [18]. Unfortunately, little is known concerning CesA complex turnover in the membrane, with only one estimate of 20 min available for the moss protonemata [19]. Our results are consistent with a patchy absence of synthase complexes in the membrane, because of a failure of the disrupted microtubule network to deliver/maintain these complexes at correct locations in the plasma membrane.
Recently, the glycosylphosphatidylinositol (GPI)-anchored protein, COBRA, has been shown to play an important role in cellulose microfibril orientation in Arabidopsis [20] and mutations at five loci in the PEANUT1-5 locus of Arabidopsis, which cause defects in GPI-anchor synthesis, result in aberrant cell wall synthesis with decreased incorporation of crystalline cellulose [21]. GPI-anchored proteins are found in lipid rafts [22] and filipin III, a fungal polyene macrolide, is known to disrupt these rafts. The phenotype observed when animals were cultured in 0.15 µM of filipin III was a reduced length of warp thread lines (Fig. 7) perpendicular to the transverse cortical F-actin array. No disruption of the spacing between microfibrils was detected. The most common point of microfibril arrest was at the juncture between the first and the second of the three central giant Eisen cells. GPI-anchored proteins are known to move between adjacent cell membranes in a process mediated by lipid rafts [23] and our results suggest that this is integral to elongation of warp thread cellulose microfibrils in construction of the nascent if. It is unclear if this occurs via direct or indirect scaffolding of cellulose microfibrils by GPI-anchored proteins. GPI-anchored and other putative scaffolding proteins involved in ordered cellulose microfibril deposition are for the most part likely to transit the Golgi. Culture of animals in 32 nM of monensin, an inhibitor of intra-Golgi trafficking, disrupted cellulose microfibril elongation in both weft and warp threads, though again, there was no effect on inter-fiber spacing in either direction. Under these conditions, it is possible that CesA complexes remained correctly positioned and spaced in the membrane but that linkage of the nascent cellulose microfibrils to scaffolding proteins for elongation is critical to a feedback loop of continued cellulose synthesis and that putative scaffolding proteins had higher turnover rates than the synthase complexes in the membrane.
Pre-house release and inflation
Involvement of GPI-anchored proteins in directly or indirectly linking the nascent pre-house rudiment to the plasma membrane of the underlying oikoplastic epithelium also suggests regulated activity of phospholipases known to cleave GPI anchors as a possible mechanism for the cyclic release of this templated structure from the underlying cellular monolayer. To test for a potential role of phospholipase action on GPI-anchored proteins during pre-house release and inflation, the effect of neomycin, an inhibitor of both phospholipase C and D, was assessed on day 3 animals. Normally, the animals leave their expanded houses approximately every 4 h and readily inflate a new house from an earlier secreted underlying pre-house rudiment. Neomycin disrupted the expansion of pre-houses and led to the accumulation of non-inflated house rudiments over time (Fig. 8). The accumulated pre-house rudiments appeared structurally normal. The effect of neomycin was immediate as animals that had just abandoned their houses and were then transferred to seawater containing neomycin were unable to expand existing pre-house rudiments. After approximately 3.5 h in the presence of 100 μM of neomycin, all animals had lost their ability to expand houses. At this time, 90% of the animals (n = 500) remained viable. When the animals were then transferred to fresh seawater, 87% of them (n = 450) were able to inflate houses within 3.5 h of transfer, demonstrating clear reversibility of the effect of neomycin. These results are consistent with possible roles for phospholipases in cleaving GPI anchors to promote pre-house release and inflation.
Conclusions
In Fig. 9, we present a working model of cytoskeletal-mediated cellulose microfibril deposition consistent with our experimental results. While there are points of convergence with favored models of cellulose deposition in plant cells, there are also key differences. This probably reflects that pathways for templating extracellular cellulose-based structures in plants and animals are likely to be analogous rather than homologous. We propose that in the O. dioica if, F-actin filaments, rather than microtubules, template cellulose microfibril orientation and that fibril elongation does not necessarily implicate movement of CesA complexes through the membrane but can occur through attachment of nascent fibrils to scaffolding proteins anchored in lipid rafts. This includes elongation of fibrils across membranes of adjacent cells.
Anti-oikosin antibody staining patterns in pre-house rudiments suggest that as a general rule, these structural proteins are incorporated into house compartments directly above their corresponding cellular field of expression, and show little significant migration in the extracellular space. They interact with the cellulose microfibril scaffold to a variable extent, with some, such as oikosin 2, essentially coating the cellulose microfibrils. Transient expression of oikosin-fluorescent protein fusion plasmid constructs driven by endogenous promoters is now feasible in O. dioica [24] and could assist in assessing the distribution and functional roles of a wider panel of oikosins in the house. Promoter swapping and capped mRNA experiments could be used to examine the effects of spatial mis-expression of oikosins on house structure. However, mosaicism could complicate interpretation of most such experiments and it would be preferable to execute these studies once stable transformant strategies have been established in this emerging model organism.
The impacts of lipid raft disruption on cellulose scaffold elaboration and the inhibition of house rudiment inflation by neomycin implicate GPI-anchored proteins in templating the house rudiment and regulating its release from the epithelium and expansion into a fully functional feeding structure. It would be of interest to perform proteomic screens of oikoplastic epithelial membrane preparations or in situ screening of in silico identified GPI-anchored proteins in the O. dioica genome to isolate candidate GPI-anchored proteins involved in these processes and to determine to what extent, if any, homologies exist to GPI-anchored proteins involved in scaffolding plant cellulose-based extracellular matrices. With sequencing of its compact 70 Mb [25] genome nearing completion, O. dioica provides an excellent comparative animal model to active research in plants aimed at further understanding cellular mechanisms for weaving the abundant natural product, cellulose, into an array of elegant and functional extracellular structures.
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Acknowledgments
We thank the staff from Appendic Park for supplying animals. This work was supported by grant 17541/S10 NFR-FUGE from the Norwegian Research Council (E.M.T.).
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Sagane, Y., Hosp, J., Zech, K. et al. Cytoskeleton-mediated templating of complex cellulose-scaffolded extracellular structure and its association with oikosins in the urochordate Oikopleura . Cell. Mol. Life Sci. 68, 1611–1622 (2011). https://doi.org/10.1007/s00018-010-0547-8
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DOI: https://doi.org/10.1007/s00018-010-0547-8