Skip to main content
Log in

Study on heterosis of inter-subspecies between indica and japonica rice (Oryza sativa L.) using chromosome segment substitution lines

  • Articles
  • Published:
Chinese Science Bulletin

Abstract

Heterosis for yield and its component traits between chromosome segments from IR24, anindica variety, and the counterparts from 02428, ajaponica rice, was investigated by using a hybrid F1 population composed of 63 combinations between 02428 and IR24 chromosome segment substitution lines (CSSLs) with the genetic background of Asominori,a japonica variety. Significant differences in heterosis for yield and yield-component traits were observed among the crosses. Analysis of graphical genotyping showed that 14 substituted segments were responsible for yield heterosis. All of them were from all the 12 chromosomes of IR24 except chromosomes 8 and 10. Six segments at the intervals of RFLP markers, such as X132-G1340-R459, X48-C393A, R288-R1854, R2918-X52, X257-C1350 and R367-X189-2-X24-2 on chromosomes 2, 3, 4, 11 and 12 respectively, had very significant heterosis for yield at the level ofP ⩽ 0.005 based ont-test, individually increasing the hybrid yield by more than 35% compared with the control cross “Asominori×02428”. Most of IR24 chromosome segments were found to have no significant hybrid effect for yield and yield-component traits, and one segment located at R2171 on chromosome 6 possessed significant negative effect with 27% of yield decrease. Advantages of using CSSLs in the heterosis studies were discussed and approaches of the partial and genome-wide exploitation of rice heterosis betweenindica andjaponica by molecular marker-assisted selection were then proposed.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Similar content being viewed by others

References

  1. Zeng, S. X., Yang, X. Q., Lu, Z. W., The heterosis of F1 hybrids betweenOryza sativa subsp. hsien andO. sativa subsp. Keng, Acta Agronomica Sinica (in Chinese), 1980, 6(4): 193–202.

    Google Scholar 

  2. Xiao, J. H., Yuan, L. P., Research on heterosis betweenindica andjapanica rice inter-subspecies and its relation to parents, Hybrid Rice (in Chinese), 1988(1): 5–9.

  3. Yuan, L. P., Strategic thinking on hybrid rice breeding, Hybrid Rice (in Chinese), 1987, 2(1): 1–3.

    Google Scholar 

  4. Li, R. H., Jiang, T. B., Xu, C. G. et al., Relationship between morphological and genetic differentiation in rice (Oryza sativa L.), Euphytica, 2000, 114: 1–8.

    Article  Google Scholar 

  5. Han, B., Xue, Y. B., Genome-wide intraspecific DNA-sequence variation in rice, Curr. Opin. Plant Biol., 2003, 6: 134–138.

    Article  PubMed  CAS  Google Scholar 

  6. Li, R. H., Xu, C. G., He, Y. Q. et al., Relationship between the extent of genetic differentiation in parental lines and heterosis ofindica-japonica hybrid rice, Acta Agronomica Sinica (in Chinese), 1998, 24(5): 564–576.

    Google Scholar 

  7. Zhao, M. F., Li, X. H., Yang, J. B. et al., Relationship between molecular marker heterozygosity and hybrid performance in intra- and inter-subspecific crosses of rice, Plant Breeding, 1999, 118: 139–144.

    Article  Google Scholar 

  8. Zhang, Q. F., Gao, Y. J., Yang, S. H. et al., A diallel analysis of heterosis in elite hybrid rice based in RFLPs and microsatellites, Theor. Appl. Genet., 1994, 89: 185–192.

    Article  Google Scholar 

  9. Zhang, Q. F., Zhou, Z. Q., Yang, G. P. et al., Molecular marker heterozygosity and hybrid performance inindica andjaponica rice, Theor. Appl. Genet., 1996, 93: 1218–1224.

    Article  Google Scholar 

  10. Stuber, C. W., Heterosis in plant breeding, Plant Breeding Reviews, 1994, 12: 227–251.

    Google Scholar 

  11. Yu, S. B., Li, J. X., Xu, C. G. et al., Importance of epistasis as the genetic basis of heterosis in an elite rice hybrid, Proc. Natl. Acad. Sci. USA, 1997, 94: 9226–9231.

    Article  PubMed  CAS  Google Scholar 

  12. Hua, J. P., Xing, Y. Z., Wu, W. R. et al., Single-locus heterotic effects and dominance by dominance interactions can adequately explain the genetic basis in an elite rice hybrid, Proc. Natl. Acad. Sci. USA, 2003, 100(5): 2574–2579.

    Article  PubMed  CAS  Google Scholar 

  13. Xiao, J. H., Li, J. M., Yuan, L. P. et al., Dominance is the major genetic basis of heterosis in rice as revealed by QTL analysis using molecular markers, Genetics, 1995, 140: 745–754.

    PubMed  CAS  Google Scholar 

  14. Li, Z. K., Luo, L. J., Mei, H. W. et al., Overdominant epistatic loci are the primary genetic basis of inbreeding depression and heterosis in rice. I. Biomass and grain yield, Genetics, 2001, 158: 1737–1753.

    CAS  Google Scholar 

  15. Luo, L. J., Li, Z. K., Mei, H. W. et al., Overdominant epistatic loci are the primary genetic basis of inbreeding depression and heterosis in rice. II. Grain yield components, Genetics, 2001, 158: 1755–1771.

    CAS  Google Scholar 

  16. Eshed, Y., Zamir, D., An introgression line population ofLycopersicon pernellii in the cultivated tomato enables the identification and fine mapping of yield-associated QTL, Genetics, 1995, 141: 1147–1162.

    PubMed  CAS  Google Scholar 

  17. Kubo, T., Nakamura, K., Yoshimura, A., Development of a series ofindica chromosome segment substitution lines inJaponica background of rice, Rice Genet. Newslett, 1999 (19): 104–106.

  18. Kubo, T., Aida, Y., Nakamura, K. et al., Reciprocal chromosome segment substitution series derivedfrom japonica andindica cross of rice (Oryza sativa L.), Breeding Sci., 2002, 52: 319–325.

    Article  CAS  Google Scholar 

  19. China Academy of Agricultural Sciences, Hunan Academy of Agricultural Sciences, Hybrid Rice Development in China, Beijing: Agricultural Press (in Chinese), 1991, 1–58.

    Google Scholar 

  20. Zou, J. S., Li, H. B., The primary utilization of wide compatibility variety “02428” inindica-japonica hybrid rice, Scientia Agricultura Sinica (in Chinese), 1989, 22(1): 6–14.

    Google Scholar 

  21. Ying, C. S., The criteria for the evaluation of China’s rice resources, In: Ying, C. S. ed., Rice Germplasm in China, Beijing: China Agricultural Scientech Press (in Chinese), 1993, 530–531.

    Google Scholar 

  22. Tsunematsu, H., Yoshimura, A., Harushima, Y. et al., RFLP framework map using recombinant inbred lines in rice, Breeding Sci., 1996, 46: 279–284.

    Google Scholar 

  23. Young, N. D., Tanksley, S. D., Restriction fragment length polymorphism maps and the concept of graphical genotypes, Theor. Appl. Genet., 1989, 77: 95–101.

    Article  Google Scholar 

  24. Paterson, A. H., DeVerna, J. W., Lanini, B. et al., Fine mapping of quantitative traits loci using selected overlapping recombinant chromosomes, in an interspecies cross of tomato, Genetics, 1990, 124: 735–742.

    PubMed  CAS  Google Scholar 

  25. Wan, J., Yamaguchi, Y., Kato, H.et al., Two new loci for hybrid sterility in cultivated rice (Oryza sativa L.), Theor. Appl. Genet., 1996, 92: 183–190.

    Article  CAS  Google Scholar 

  26. Kubo, T., Eguchi, M., Yoshimura, A., A new gene for F1 pollen sterility inJaponica / indica cross of rice, Rice Genet. Newslett., 1999, 17: 63–64.

    Google Scholar 

  27. Crow, J. F., The rise and fall of overdominance, Plant Breeding Reviews, 2000, 17: 225–257.

    Google Scholar 

  28. Stuber, C. W., Lincoln, S. E., Wolff, D. W. et al., Identification of genetic factors contributing to heterosis in a hybrid from two elite maize inbred lines using molecular markers, Genetics, 1992, 132: 823–839.

    PubMed  CAS  Google Scholar 

  29. Cockerham, C. K., Zeng, Z. B., Design III with marker loci, Genetics, 1996, 143: 1437–1456.

    PubMed  CAS  Google Scholar 

  30. Graham, G. I., Wolff, D. W., Stuber, C. W., Characterization of a yield quantitative trait locus on chromosome five of maize by fine mapping, Crop. Sci., 1997, 37: 1601–1610.

    CAS  Google Scholar 

  31. Monforte, A. J., Tanksley, S. D., Fine mapping of a quantitative trait locus (QTL) fromLycopersicon hirsutum chromosome 1 affecting fruit characteristics and agronomic traits: Breaking linkage among QTLs affecting different traits and dissection of heterosis for yield, Theor. Appl. Genet, 2000, 100: 471–479.

    Article  CAS  Google Scholar 

  32. Tanksley, S. D., Nelson, J. C., Advanced backcross QTL analysis: A method for the simultaneous discovery and transfer of valuable QTL from unadapted germplasm into elite breeding lines, Theor. Appl. Genet., 1996, 92: 191–203.

    Article  Google Scholar 

  33. Xiao, J. H., Grandillo, S., Ahn, S. N., et al., Genes from wild rice improve yield, Nature, 1996, 384: 223–224.

    Article  CAS  Google Scholar 

  34. Lu, C. G., Zou, J. S., Research progress in the compatibility of inter-subspecific hybrid rice (Oryza sativa L.), Jiangsu J. Agri. Sci. (in Chinese), 2000, 16 (1): 50–56.

    Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Jianmin Wan.

About this article

Cite this article

Yu, C., Wan, J., Zhai, H. et al. Study on heterosis of inter-subspecies between indica and japonica rice (Oryza sativa L.) using chromosome segment substitution lines. Chin.Sci.Bull. 50, 131–136 (2005). https://doi.org/10.1007/BF02897516

Download citation

  • Received:

  • Accepted:

  • Issue Date:

  • DOI: https://doi.org/10.1007/BF02897516

Keywords

Navigation