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Cloning and expression analysis of human reticulon 4c cDNA

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Chinese Science Bulletin

Abstract

RTNs (reticulons) is a gene family related to the growth and differentiation of neuroendocrine cell. This family is composed of several members such asRTN1, RTN2 andRTN3. RTN1 andRTN2 have been proved to have 3 transcripts with different length. Because theRTN1c cDNA was involved in the sologenesis of small cell lung carcinoma (SCLC), it was selected as a bioinformatic probe to clone novel members ofRTN family with the electric hybridization assistant new-gene cloning method (EHAC). A 1677-bp cDNA was identified from human brain cDNA library. The cDNA contains an intact open reading frame (ORF) which encodes a protein of 199 amino acids. This deduced protein is highly homologous to RTN1c, RTN2c and RTN3 with identities of 64.4% 45.8% and 50.0% respectively. This new gene was namedRTN4c (GenBank accession number: AF087901). Northern hybridization showed that the full length ofRTN4c transcript is about 1.8 kb. It is hardly expressed in heart, placenta, lung, spleen, thymus, testis, ovary, small intestine and peripheral blood white cells; but it is highly expressed in the tissues of skeletal muscle, brain, liver and kidney, and less expressed in the pancreas, prostate and colon. Furthermore, Northern results also showed that there is a 2.3 kb transcript expressed in 14 tissues except liver and skeletal muscle; while another 5.0 kb transcript in brain, skeletal muscle and testis. By the electric hybridization walking, we obtained two full-length contigs with a length of 4632 and 2235 bp respectively. The former encodes a protein with 1192 amino acids and was defined as RTN4a: the latter encodes another protein with 373 amino acids. and was named RTN4b. TheRTN4 gene was mapped to human chromosome 2p14–p13 region by the radiation hybridization (RH).

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References

  1. Kreyberg, L., World Health Orgnization, histological typing of lung tumors, 2nd ed., Am. J. Clin. Pathol., 1982, 77: 123.

    Google Scholar 

  2. Gould, V. E., Linnoila, R. I., Memoli, V. A. et al., Neuroendocrine components of the bronchopulmonary tract: Hyperplasia, dysplasias and neoplasms, Lab. Invest., 1983, 49: 519.

    PubMed  CAS  Google Scholar 

  3. Broers, J. L.V., Mijnheere, E.P., Klein, R. et al., Novel antigen characteristic of neuroendocrine malignancies, Cancer, 1991, 67: 619.

    Article  PubMed  CAS  Google Scholar 

  4. Roebroek, A. J. M., van de Velde, H. J. K., Van Bokhoven A. et al., Cloning and expression of alternative transcripts of a novel neul-oendocrinc-specific gene and identification of its 135-kDa translational product, J. Biol. Chem., 1993, 268: 13430.

    Google Scholar 

  5. Senden, N. H. M., van de Velde, H. J. K., Broers, J. L. V. et al., Cluster-10 lung-cancer antibodies recognize NSPs, novel neuroendocrine proteins associated with membranes of the endoplasmic reticulum, Int. J. Cancer, 1994, 8(suppl.): 84.

    Article  CAS  Google Scholar 

  6. Senden, N.H.M., Helgi, J.K., van de Velde, H. J. K. et al., Subcellular localization and supramolecular organization of neuroendocrine-specific protein B (NSP-B) in small cell lung cancer, Eur. J. Cell Biol., 1994, 65: 341.

    PubMed  CAS  Google Scholar 

  7. Helgi, J.K., van de Velde, H. J. K., Roebroek, A. J. M. et al., Molecular analysis of expression in rat brain of NSP-A, a novel neuroendocrine-specific protein of the endoplasmic reticulum, Mol. brain Res., 1994, 23: 81.

    Article  Google Scholar 

  8. Senden, N. H. M., Timmer, E. D. J., Boers, J. E. et al., Neuroendocrine-specific protein c(NSP-c) subcellular localization and differential expression in relation to NSP-A, Eur. J. Cell Biol., 1996, 69: 197.

    PubMed  CAS  Google Scholar 

  9. Roebroek, A. J. M., Contreras, B., Pauli, I.G.L. et al., cDNA cloning, genomic organization, and expression of the human RTN2 gene, a member of a gene family encoding reticulons, Genomics, 1998, 51: 98.

    Article  PubMed  CAS  Google Scholar 

  10. Moreira, E. F., Jaworski, C. J., Rodriguez, I. R., Cloning of a novel member of the reticulon gene family (RTN3): gene structure and chromosomal localization to 11q13, Genomics, 1999, 58: 73.

    Article  PubMed  CAS  Google Scholar 

  11. Altschul, S.F., Madden, T.L., Schaffer, A.A. et al., Gapped BLAST and PSI-BLAST: a new generation of protein database search programs, Nucleic. Acids Res., 1997, 25(17): 3389.

    Article  PubMed  CAS  Google Scholar 

  12. Nielsen, H., Engelbrecht, J., Brunak, S. et al., Identification of prokaryotic and eukaryotic signal peptides and prediction of their cleavage sites, Protein Engineering, 1997, 10: 1.

    Article  PubMed  CAS  Google Scholar 

  13. Gunnar von Heijne, Membrane protein structure prediction, hydrophobicity analysis and the positive-inside rule, J. Mol. Biol., 1992, 225: 487.

    Article  Google Scholar 

  14. Helgi, J.K., van de Velde, H. J. K., Roebroek, A.J.M. et al., NSP-encoded reticulons, neuroendocrine proteins of a novel gene family associated with membranes of the endoplasmic reticulum, J. Cell Sci., 1994, 107: 2403.

    Google Scholar 

  15. Helgi, J.K., van de Velde, H. J. K., Senden, H.M. et al., NSP-encoded reticulons are neuroendocrine markers of a novel category in human lung cancer diagnosis, Cancer Res., 1994, 4: 4769.

    Google Scholar 

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Correspondence to Long Yu.

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Bi, A., Yu, L., Yang, J. et al. Cloning and expression analysis of human reticulon 4c cDNA. Chin.Sci.Bull. 45, 1862–1869 (2000). https://doi.org/10.1007/BF02886295

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