Abstract
Oxidative stress in microbial cells shares many similarities with other cell types but it has its specific features which may differe in prokaryotic and eukaryotic cells. We survey here the properties and actions of primary sources of oxidative stress, the role of transition metals in oxidative stress and cell protective machinery of microbial cells, and compare them with analogous features of other cell types. Other features to be compared are the action of reactive oxygen species (ROS) on cell constituents, secondary lipid-or protein-based radicals and other stress products. Repair of oxidative injury by microorganisms and proteolytic removal of irreparable cell constituents are briefly described. Oxidative damage of aerobically growing microbial cells by endogenously formed ROS mostly does not induce changes similar to the aging of multiplying mammalian cells. Rapid growth of bacteria and yeast prevents accumulation of impaired macromolecules which are repaired, diluted or eliminated. During growth some simple fungi, such as yeast orPodospora spp., exhibit aging whose primary cause seems to be fragmentation of the nucleolus or impairment of mitochondrial DNA integrity. Yeast cell aging seems to be accelerated by endogenous oxidative stress. Unlike most growing microbial cells, stationaryphase cells gradually lose their viability because of a continuous oxidative stress, in spite of an increased synthesis of antioxidant enzymes. Unlike in most microorganisms, in plant and animal cells a severe oxidative stress induces a specific programmed death pathway-apoptosis. The scant data on the microbial death mechanisms induced by oxidative stress indicate that in bacteria cell death can result from activation of autolytic enzymes (similarly to the programmed mother-cell death at the end of bacillar sporulation). Yeast and other simple eukaryotes contain components of a proapoptotic pathway which are silent under normal conditions but can be activated by oxidative stress or by manifestation of mammalian death genes, such asbak orbax. Other aspects, such as regulation of oxidative-stress response, role of defense enzymes and their control, acquisition of stress tolerance, stress signaling and its role in stress response, as well as cross-talk between different stress factors, will be the subject of a subsequent review.
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References
Adams M.W.W.: The biochemical diversity of life near and above 100°C in marine environments.J. Appl. Microbiol.85, 108S-117S (1999).
Adjimani J.P., Owusu E.: Nonenzymatic NADH/FMN-dependent reduction of ferric siderophores.J. Inorg. Biochem.66, 247–252 (1997).
Ahmad S.I., Kirk S.H., Eisenstark A.: Thymine metabolism and thymineless death in prokaryotes and eukaryotes.Ann. Rev. Microbiol.52, 591–625 (1998).
Aizenman E., Engelberg-Kulka H., Glaser G.: AnEscherichia coli chromosomal addiction molecule regulated by 3',5'-bispyrophosphate: a model for programmed bacterial cell death.Proc. Nat. Acad. Sci. USA93, 6059–6063 (1996).
Akaike T., Suga M., Maeda H.: Free radicals in viral pathogenesis: molecular mechanisms involving superoxide and NO.Proc. Soc. Exp. Biol. Med.217, 64–73 (1998).
Albrecht-Gary A.-M., Crumbliss A.L.: Coordination chemistry of siderophores: thermodynamics and kinetics of iron chelation and release, pp. 240–323 inMetal Ions in Biological Systems (A. Sigel, H. Sigel, Eds.). Marcel Dekker, New York-Basel-Hong Kong 1998.
Allen R.T., Cluck M.W., Agrawal D.K.: Mechanisms controlling cellular suicide, role of bcl-2 and caspases.Cell Mol. Life Sci.54, 427–445 (1998).
Altuvia S., Almirón M., Huisman G., Kolter R., Storz G.: Thedps promoter is activated by OxyR during growth and by IHF and σS in stationary phase.Mol. Microbiol.13, 265–272 (1994).
Ameisen J.C.: The origin of programmed cell death.Science272, 1278–1279 (1996).
Ames B.N., Shigenaga M.K., Hagen T.M.: Oxidants, antioxidants and degenerative disease of aging.Proc. Nat. Acad. Sci. USA90, 7915–7922 (1993).
Ames B.M., Shigenaga M.K.: Oxidants are the major contributor to aging.Ann. New York Acad. Sci.663, 85–96 (1992).
Armstrong D.,Free Radical and Antioxidant Protocols/Methods. Mol. Biol. 108 (D. Armstrong, Ed.), Humana Press, Totowa (NJ) 1998.
Ashrafi K., Sinclair D., Gordon J.I., Guarente L.: Pasage through stationary phase advances replicative aging inSaccharomyces cerevisiae.Proc. Nat. Acad. Sci. USA96, 9100–9105 (1999).
Askwith C., Kaplan J.: Iron and copper transport in yeast and its relevance to human disease.Trends Biochem. Sci.23, 135–138 (1998).
Aslund F., Beckwith J.: The thioredoxin superfamily: redundancy, specificity, and gray-area genomics.J. Bacteriol.181, 1375–1379 (1999).
Assmann S., Sigler K., Höfer M.: Cd2+-induced damage to yeast plasma membrane and its alleviation by Zn2+: studies onSchizosaccharomyces pombe cells and reconstituted plasma membrane vesiclesArch. Microbiol.165, 279–284 (1996).
Ashoh S., Nishimaki K., Nanbu-Wakao R., Ohta S.: A trace amount of the human pro-apoptotic factor Bax induces bacterial death accompanied by damage of DNA.J. Biol. Chem.273, 11384–11391 (1998).
Augeri L., Lee Y.M., Barton A.B., Doetsch P.W.: Purification, characterization, gene cloning, and expression ofSaccharomyces cerevisiae redoxyendonuclease, a homolog ofEscherichia coli endonuclease III.Biochemistry36, 721–729 (1997).
Bagg A., Neilands J.B.: Ferric uptake regulation protein acts as a repressor employing iron(II) as a cofactor to bind the operator of an iron transport operon inEscherichia coli.Biochemistry26, 5471–5477 (1987).
Bailey S.M., Fauconnet A.-L., Reinke L.A.: Comparison of salicylate andd-phenylalanine for detection of hydroxyl radicals in chemical and biological reactions.Redox Report3, 17–22 (1997).
Barker M.G., Brimage L.J.E., Smart K.A.: Effect of Cu,Zn superoxide dismutase mutation on replicative senescence inSaccharomyces cerevisiae.FEMS Microbiol. Lett.177, 199–204 (1999).
Barr D.P., Gunther M.R., Deterling L.J., Tomer K.B., Mason R.P.: ESR spin trapping of a protein-derived tyrosyl radical from the reaction of cytochromec with hydrogen peroxide.J. Biol. Chem.271, 15498–15503 (1996).
Basu A.K., Loechler E.L., Leadon L.A., Essigman J.M.: Genetic effects of thymine glycols: site specific mutagenesis and molecular modeling studies.Proc. Nat. Acad. Sci. USA86, 7677–7681 (1989).
Beall B., Sanden G.N.: ABordetella pertussis fepA homologue required for utilization of exogenous ferric enterobactin.Microbiology (UK)141, 3193–3205 (1995).
Becker-Hapak M., Eisenstark A.: Role ofrpoS in the regulation of glutathione oxidoreductase (gor) inEscherichia coli.FEMS Microbiol. Lett.134, 39–44 (1995).
Beckman K.B., Ames B.N.: The free radical theory of aging matures.Physiol. Rev.78, 547–581 (1998).
Belazzi T., Wagner A., Wieser R., Schanz M., Adam G., Hartig A., Ruis H.: Negative regulation of transcription of theS. cerevisiae catalase T (CTT1) gene by cAMP is mediated by a positive control element.EMBO J.10, 585–592 (1991).
Benzie I.F.F., Strain J.J.: The ferric reducing ability of plasma (FRAP) as a measure of “antioxidant power”: the FRAP assay.Anal. Biochem.239, 70–76 (1996).
Biswas G.B., Anderson J.E., Sparling P.F.: Cloning and functional characterization ofNeisseria gonorrhoeae tonB, exbB andsxbD genes.Mol. Microbiol.24, 169–179 (1997).
Billard P., Dumond H., Bolotin-Fukuhara M.: Characterisation of an AP-1-like transcription factor that mediates an oxidative stress response inKluyveromyces lactis.Mol. Gen. Genet.257, 62–70 (1997).
Bleau G., Giasson C., Brunette I.: Measurement of hydrogen peroxide in biological samples containing high levels of ascorbic acid.Anal. Biochem.263, 13–17 (1998).
Bloomfield S.F., Arthur M.: Interactions ofBacillus subtilis spores with sodium hypochlorite, sodium dichloroisocyanurate and chloramine.J. Appl. Bacteriol.72, 166–172 (1992).
Boiteux S.: Properties and biological functions of the Nth and Fpg proteins ofEscherichia coli: Two DNA glycosylases that repair oxidative damage in DNA.Photochem. Photobiol.B19, 87–96 (1993).
Brennan R.J., Schiestl R.H.: Cadmium is an inducer of oxidative stress in yeast.Mutat. Res.356, 171–178 (1996).
Brennan R.J., Schiestl R.H.: Amline and its metabolites generate free radicals in yeast.Mutagenesis12, 215–220 (1997).
Breeuwer P., Drocourt J.-L., Rombouts F.M., Abee T.: Energy-dependent, carrier-mediated extrusion of carboxyfluorescein fromS. cerevisiae allows rapid assessment of cell viability by flow cytometry.Appl. Environ. Microbiol.60, 1467–1472 (1994).
Breeuwer P., Drocourt J.-L., Bunschoten N., Zwietwring M.H., Rombouts F.M., Abee T.: Characterization of uptake and hydrolysis of fluorescein diacetate and carboxyfluorescein diacetate by intracellular esterases inS. cerevisiae, which result in accumulation of fluorescent product.Appl. Environ. Microbiol.61, 1614–1619 (1995).
Brickman T.J., Armstrong S.K.: Purification, spectroscopic analysis and biological activity of the macrocyclic dihydroxamate siderophore alcaligin produced byBordetella bronchiseptica.Biometals9, 191–203 (1996).
Cai J., Jones D.P.: Superoxide in apoptosis. Mitochondrial generation triggered by cytochromec loss.J. Biol. Chem.273, 11401–11404 (1998).
Campisi J.: Replicative senescence: an old live's tale?.Cell84, 497–500 (1996).
Candeias L.P., Patel K.B., Stratford M.R.L., Wardman P.: Free hydroxyl radicals are formed on reaction between the neutrophilderived species superoxide anion and hypochlorous acid.FEBS Lett.333, 151–153 (1993).
Candeias L.P., Stratford M.R.L., Wardman P.: Formation of hydroxyl radicals on reaction of hypochlorous acid with ferrocyanide, a model iron(II) complex.Free Radicals Res.20, 241–249 (1994).
Cannac-Caffrey V., Hudry-Clergeon G., Petillot Y., Gagnon J., Zaccai G., Franzetti B.: The protein sequence of an archeal catalase-peroxidase.Biochimie80, 1003–1011 (1998).
Castignetti D.: Probing ofPseudomonas aeruginosa, P. aureofaciens, Burkholderia (Pseudomonas) cepacia, P. fluorescens, andP. putida with the ferripyochelin receptor A gene and the synthesis of pyochelin inP. aureofaciens, P. fluorescens andP. putida.Curr. Microbiol.34, 250–257 (1997).
Catalano C.E., Choe Y.S., Ortiz de Montellano P.R.: Reaction of the protein radical in peroxide-treated myoglobin.J. Biol. Chem.264, 10534–10541 (1989).
Chaloupka J., Vinter V.: Programmed cell death in bacteria.Folia Microbiol.41, 451–464 (1996).
Chen C.-J., Sparling P.F., Lewis L.A., Dyer D.W., Elkins C.E.: Identification and purification of a hemoglobin-binding outer membrane proteins fromNeisseria gonorrhoeae.Infect. Immun.64, 5008–5014 (1996).
Chopra A.K., Strandová M., Chaloupka J.: Turnover of abnormal proteins inBacillus megaterium andSaccharomyces cerevisiae: differences betweenin vivo andin vitro degradation.Arch. Microbiol.145, 97–103 (1986).
Christensen B.E., Myhr M., Smidsrød O.: The degradation of xanthan by hydrogen peroxide in the presence of ferrous ions. Comparison to acid hydrolysis.Carbohydr. Res.280, 85–99 (1996).
CohenG.: The Fenton reaction, pp. 55–64 inCRC Handbook for Oxygen Radical Research (R.A. Greenwald, Ed.). CRC Press, Boca Raton 1985.
Colepicolo P., Camarero V.C.P.C., Nicolas M.T., Bassot J.-M., Karnovsky M.L., Hastings J.W.: A sensitive and specific assay for superoxide anion released by neutrophils or macrophages based on bioluminescence of polynoidin.Anal. Biochem.184, 369–374 (1990).
Cortez N., Carillo N., Pasternak C., Balzer A., Klug G.: Molecular cloning and expression analysis ofRhodobacter capsulatus sodB gene, encoding an iron superoxide dismutase.J. Bacteriol.180, 5413–5420 (1998).
Coulanges V., Andre P., Vidon D.J.-M.: Effect on siderophores, catecholamines, and catechol compounds onListeria spp. Growth in iron-complexed medium.Biochem. Biophys. Res. Commun.167, 126–130 (1998).
Craig E.A., Weissman J.S., Horwich A.L.: Heat shock proteins and molecular chaperones mediators of protein conformation and turnover in the cell.Cell78, 365–372 (1994).
Cummings D.J.: Mitochondrial DNA inPodospora anserina. A molecular approach to cellular senescence.Monograph. Dev. Biol.17, 254–266 (1984).
Cunningham R.C.: DNA glycosylases.Mutat. Res.383, 189–196 (1997).
DalleDonne I., Milzani A., Colombo R.: H2O2-treated actin: assembly and polymer interactions with cross-linking proteins.Biophys. J.69, 2710–2719 (1995).
Dang J., Holub E.: La dolce vita: a molecular feast in plant-pathogen interactions.Cell91, 17–24 (1997).
Daniel C., Haentjens S., Bissinger M.C., Courcol R.J.: Characterization of theAcinetobacter baumanii Fur regulator: cloning and sequencing of thefur homolog gene.FEMS Microbiol. Lett.170, 199–209 (1999).
Davies K.J.A.: Intracellular proteolytic systems may function as secondary antioxidant defenses: an hypothesis.Free Radicals Biol. Med.2, 155–173 (1986).
Davies K.J.A.: Protein damage and degradation by oxygen radicals. I. General aspects.J. Biol. Chem.262, 9895–9901 (1987).
Davies K.J.A., Lin S.W.: Degradation of oxidatively denatured proteins inEscherichia coli.Free Radicals Biol. Med.5, 215–223 (1988a).
Davies K.J.A., Lin S.W.: Oxidatively denatured proteins are degraded by an TP-independent proteolytic pathway inEscherichia coli.Free Radicals Biol. Med.5, 225–236 (1988b).
Davies M.J., Dean R.T.:Radical-mediated Protein Oxidation. From Chemistry to Medicine Oxford University Press. Oxford-New York-Tokyo 1997.
Dean R.T., Fu S., Stocker R., Davies M.J.: Biochemistry and pathology of radical-mediated protein oxidation.Biochem. J.324, 1–18 (1997).
Decamp O., Rajendran N., Nakano H., Nair G.B.: Estimation of the viability ofVibrio cholerae O139 by assessing cell membrane integrity.Microbios92, 83–89 (1997).
Demple B.: Adaptive responses to genotoxic damage: bacterial strategies to prevent mutation and cell death.Bioassays6, 154–160 (1986).
Demple B., Harrison L.: Repair of oxidative damage to DNA: enzymology and biology.Ann. Rev. Biochem.63, 915–948 (1994).
Deretic V., Philipp W., Dhandayuthapani S., Mudd M.H., Curcic R., Garbe T., Heym B., Viat E., Cole S.T.:Mycobacterium tuberculosis is a natural mutant with an inactive oxidative-stress regulatory gene: implication for sensitivity to isoniazide.Mol. Microbiol.17, 889–900 (1995).
Deutsch J.C.: Ascorbic acid oxidation by hydrogen peroxide.Anal. Biochem.255, 1–7 (1998).
Dickson R.C.: Sphingolipid functions inSaccharomyces cerevisiae: comparison to mammals.Ann. Rev. Biochem.67, 27–48 (1998).
Di Mascio P., Bechara E.J.H., Medeiros M.H.G., Briviba K., Sies H.: Singlet molecular oxygen production in the reaction of peroxynitrite with hydrogen peroxide.FEBS Lett.355, 287–289 (1994).
Diomina G.R., Pleshakova O.V., Sibeldina L.A., Kharatian E.F., Shchipanova I.N., Ostrovsky D.N.: Stability of a recently discovered product of oxidative stress in bacterial cells.Biochemistry (Moscow)60, 481–486 (1995).
Dix D., Bridgham J., Broderius M., Eide D.: Characterization of the FET4 protein of yeast. Evidence for a direct role in the transport of iron.J. Biol. Chem.272, 11770–11777 (1997).
Dizdaroglu M.: Oxidative damage to DNA in mammalian chromatin.Mutat. Res.275, 331–342 (1992).
Donnini D., Zambito A.M., Perrella G., Ambesi-Impiombato F.S., Curcio F.: Glucose may induce cell death through a free radical-mediated mechanism.Biochem. Biophys. Res. Commun.219, 412–417 (1996).
Doyle R.J., Chaloupka J., Vinter V.: Turnover of cell wall in microorganisms.Microbiol. Rev.52, 554–567 (1988).
Dowds B.C.A., Murphy P., Mc Conell D.J., Devine K.M.: Relationship among oxidative stress, growth cycle and sporulation inBacillus subtilis.J. Bacteriol.169, 5771–5775 (1987).
Dreher D., Junod A.F.: Role of oxygen free radicals in cancer development.Eur. J. Cancer32A, 30–38 (1996).
Dukan S., Dadon S., Smulski D.R., Belkin S.: Hypochlorous acid activates the heat shock and sox RS systems ofEscherichia coli.Appl. Environ. Microbiol.62, 4003–4008 (1996).
Dunning J.C., Ma Y., Marquis R.E.: Anaerobic killing of oral streptococci by reduced, transition metal cations.Appl. Environ. Microbiol.64, 27–33 (1998).
Edeas M.A., Emerit I., Kalfoun Y., Lazizi Y., Cernjavski L., Levy A., Lindenbaum A.: Clastogenic factors in plasma of HIV-infected patients activate HIV-I replicationin vitro: inhibition by superoxide dismutase.Free Radicals Biol. Med.23, 571–578 (1997).
Eide D.J.: The molecular biology of metal ion transport inS. cerevisiae.Ann. Rev. Nutr.18, 441–469 (1998).
Eide L., Bjoras M., Pirovano M., Alseth I., Berdal K.G., Seeberg E.: Base excision of oxidative purine and pyrimidine DNA damage inSaccharomyces cerevisiae by a DNA glycosylase with sequence similarity to endonucleae III fromEscherichia coli.Proc. Nat. Acad. Sci. USA93, 10735–10740 (1996).
Eisenstark A., Miller K., Jones J. Levén S.:Escherichia coli genes involved in cell survival during dormancy: role of oxidative stress.Biochem. Biophys. Res. Commun.188, 1054–1059 (1992).
Eisenstark A., Yallaly P., Ivanova A., Miller C.: Genetic mechanisms involved in cellular recovery from oxidative stress.Arch. Insect. Biochem. Physiol.29, 159–173 (1995).
Ellis R.E., Yuan J., Horvitz H.R.: Mechanisms and function of cell death.Ann. Rev. Cell Biol.7, 663–698 (1991).
Enoch T., Norbury C.: Cellular responses to DNA damage: cell-cycle check points, apoptosis and the roles of p53 and ATM.Trends Biol. Sci.20, 426–430 (1995).
Epe B.: DNA damage profiles induced by oxidizing agents.Rev. Physiol. Biochem. Pharmacol.127, 223–249 (1995).
Errington J.:Bacillus subtilis sporulation: regulation of gene expression and control of morphogenesis.Microbiol. Rev.57, 1–33 (1993).
Esterbauer H., Schaur R.J., Zollner H.: Chemistry and biochemistry of 4-hydroxynonenal, malonaldehyde and related aldehydes.Free Radicals Biol. Med.10, 191–193 (1991).
Esterbauer H.: Cytotoxicity and genotoxicity of lipid oxidation products.Amer J. Clin. Nutr.57, 779S-786S (1993).
Esterbauer H.: Estimation of peroxidative damage. A critical review.Pathol. Biol.,44, 25–28 (1996).
Faragher R.G.A., Kipling D.: How might replicative senescence contribute to human ageing?Bioassays20, 985–991 (1998).
Farr S.B., Kogoma T.: Oxidative stress responses inEscherichia coli andSalmonella typhimurium.Microbiol. Rev.55, 561–585 (1991).
Feng J., Yamanaka K., Niki H., Ogura T., Hiraga S.: New killing system controlled by two genes located immediately upstream of themukB gene inEscherichia coli.Mol. Gen. Genet.243, 136–147 (1994).
Fenton W.A., Horwich A.L.: GroEL-mediated protein folding.Protein Sci.6, 743–760 (1997).
Ferguson G.P., Booth I.R.: Importance of glutathione for growth and survival ofEscherichia coli cells: detoxication of methylglyoxal and maintenance of intracellular K+.J. Bacteriol.180, 4314–4318 (1998).
Flattery-O'Brien J.A., Daves I.W.: Hydrogen peroxide causes RAD9-dependent cell cycle arrest in G2 inSaccharomyces cerevisiae whereas menadione causes G1 arrest independent of RAD9 function.J. Biol. Chem.273, 8564–8571 (1998).
Flattery-O'Brien J.A., Grant C.M., Dawes I.W.: Stationary phase regulation of theSaccharomyces cerevisiae SOD2 gene is dependent on additive effects of HAP2/3/4/5-and STRE-binding elements.Mol. Microbiol.23, 303–312 (1997).
Fouz B., Biosca E.G., Amaro C.: High affinity iron uptake systems inVibrio damsela: role in the acquisition of iron from transferrin.J. Appl. Microbiol.82, 157–167 (1997).
Fréhel C., Ryter A.: Reversibilité de la sporulation chezB. subtilis.Ann. Inst. Pasteur117, 297–311 (1969).
Frenkel K., Wei L.H., Wei H.C.: 7,12-Dimethylbenz[a]anthracene induces oxidative DNA modificationin vivo.Free Radicals Biol. Med.19, 373–380 (1995).
Frew J.E., Jones P., Scholes G.: Spectrophotometric determination of hydrogen peroxide and organic hydroperoxides at low concentrations in aqueous solutions.Anal. Chim. Acta155, 139–150 (1983).
Friedberg E.C., Walker G.C., Siede W.:DNA Repair and Mutagenesis. AMS Press, Washington (DC) 1995.
Fuentes A.M., Amabile-Cuevas C.F.: Antioxidant vitamins C and E affect the superoxide-mediated induction ofsoxRS regulon inEscherichia coli.Microbiology (UK)144, 1731–1736 (1998).
Gabai V.L., Meriin A.B., Mosser D.D., Caron A.W., Rits S., Shifrin V.I., Sherman M.Y.: Hsp 70 prevents activation of stress kinases. A novel pathway of cellular thermotolerance.J. Biol. Chem.272, 18033–18037 (1997).
Gardner P., Fridovich I.: Superoxide sensitivity of theEscherichia coli 6-phosphogluconate dehydratase.J. Biol. Chem.266, 1478–1483 (1991).
Garner W.H., Garner M.H., Spector A.: H2O4-induced uncoupling of bovine lens Na+, K+-ATPase.Proc. Nat. Acad. Sci. USA80, 2044–2048 (1983).
Garner W.H., Garner M.H., Spector A.: Kinetic cooperativity change after H2O2 modification of (Na,K)-ATPase.J. Biol. Chem.259, 7712–7718 (1984).
Gebicky J.M.: Protein hydroperoxides as new reactive oxygen species.Redox Report3, 99–110 (1997).
Gershman R., Gilbert D.L., Nye S.W., Dwyer P., Fenn W.O.: Oxygen poisoning and X-irradiation: a mechanism in common.Science119, 623–629 (1854).
Gille G., Sigler K.: Oxygen and the living cells.Folia Microbiol.40, 131–152 (1997).
Gille G., Sigler K., Höfer M.: Response of catalase activity and membrane fluidity of aerobically grownSchizosaccharomyces pombe andS. cerevisiae to aeration and the presence of substrates.J. Gen. Microbiol.139, 1627–1634 (1993).
Ginsburg I.: Could synergistic interactions among reactive oxygen species, proteinases, membrane-perforating enzymes, hydrolases, microbial hemolysins and cytokines be the main cause of tissue damage in infectious and inflammatory conditions?Med. Hypotheses51, 337–346 (1998).
Girard P.M., Boiteux S.: Repair of oxidized DNA bases in the yeastSaccharomyces cerevisiae.Biochimie79, 559–566 (1997).
Gockeritz D., Friedrich F., Yahya M.: Spectrophotometric determination of hydrogen peroxide.Pharmacie50, 437–438 (1995).
Goff S.A., Goldberg A.L.: Production of abnormal proteins inE. coli stimulates transcription oflon and other heat shock genes.Cell41, 587–595 (1985).
Goldberg A.L., St. John A.C.: Intracellular protein degradation in mammalian and bacterial cells. Part 2.Ann. Rev. Biochem.45, 747–803 (1976).
Gossard F., Verly W.G.: Properties of the main endonuclease specific for apurinic sites ofEscherichia coli. Mechanism of apurinic site excision from DNA.Eur. J. Biochem.82, 321–332 (1978).
Gossett J., Lee K., Cunningham R.P., Doetsch P.W.: Yeast redoxyendonuclease: a DBA repair enzyme similar toEscherichia coli endonuclease III.Biochemistry27, 2629–2634 (1988).
Gottesman S., Wickner S., Maurizi M.R.: Protein quality control: triage by chaperones and proteases.Genes Develop.11, 815–823 (1997).
Grady J.K., Chasteen N.D., Harris D.C.: Radicals from “Good's” buffers.Anal. Biochem.173, 111–115 (1988).
Grant C.M., Dawes I.W.: Synthesis and role of glutathione in protection against oxidative stress in yeast.Redox Report2, 223–229 (1996).
Green D., Kroemer G.: The central executioners of apoptosis: caspases or mitochondria?Trends Cell Biol.8, 267–271 (1998).
Greenberg J.T.: Programmed cell death: a way of life for plants.Proc. Nat. Acad. Sci. USA93, 12094–12097 (1996).
Greenwald R.A. (Ed.)CRC Handbook for Oxygen Radical Research. CRC Press, Boca Raton 1985.
Greenwood N.N., Earnshaw A.:Chemistry of Elements, Vol. II, pp. 1121–1126. (in Czech) Informatorium, Prague 1993.
Grollman A.P., Moriya M.: Mutagenesis by 8-oxoguanine: an enemy within.Trends Genet.9, 246–249 (1993).
Grune T., Reinheckel T., Joshi M., Davies K.J.A.: Proteolysis in cultured epithelial cells during oxidative stress. Role of the multicatalytic proteinase complex, proteasome.J. Biol. Chem.270, 2344–3451 (1995).
Grune T., Reinheckel T., Davies K.J.A.: Degradation of oxidized proteins in K562 human hematopoietic cells by proteasome.J. Biol. Chem.271, 15504–15509 (1996).
Grune T., Reinheckel T., Davies K.J.A.: Degradation of oxidized proteins in mammalian cells.FASEB J.11, 526–534 (1997).
Gutteridge J.M.: Reactivity of hydroxyl and hydroxyl-like radicals discriminated by release of thiobarbituric acid-reactive material from deoxy sugars, nucleosides and benzoate.Biochem. J.224, 761–767 (1984).
Gutteridge J.M.C., Quinlan G.J., Kovacic P.: Commentary: phagomimetic action of antimicrobial agents.Free Radicals Res.28, 1–14 (1998).
Haberland A., Damerau W., Stösser R., Schimke I., Baumann G.: Fe2+/vitamin C—an appropriatein vitro model system to initiate lipid peroxidation.J. Inorg. Biochem.61, 43–53 (1996).
Hahn K.B., Lee K.J., Kim J.H., Cho S.W., Chung M.H.:Helicobacter pylori infection, oxidative DNA damage, gastric carcinogenesis, and reversibility by rebamipide.Digest Dis. Sci.43, S72-S77 (1998).
Halliwell B., Gutteridge J.M.C.: Formation of a thiobarbituric-acid-reactive substance from deoxyribose in the presence of iron salts.FEBS Lett.128, 347–352 (1981).
Halliwell B., Gutteridge J.M.C.: Oxygen free radicals and iron in relation to biology and medicine: some problems and concepts.Arch. Biochem. Biophys.246, 501–514 (1986).
Halliwell B., Gutteridge J.M.C.:Free Radicals in Biology and Medicine, 2nd ed. Clarendon Press, Oxford 1989.
Halliwell B., Gutteridge J.M.C.: The definition and measurements of antioxidants in biological systems.Free Radicals Biol. Med.18, 125–126 (1995).
Hanlon M.C., Seybert D.W.: The pH dependence of lipid peroxidation using water-soluble azo initiators.Free Radicals Biol. Med.23, 712–719 (1997).
Hansberg W., de Groot H., Sies H.: Reactive oxygen species associated with cell differentiation inNeurospora crassa.Free Radicals Biol. Med.14, 287–293 (1993).
Harman D.: Aging: a theory based onfree radical and radiation biology.J. Gerontol.,11, 298–300 (1956).
Harms C., Meyer M.A., Andreesen J.R.: Fast purification of thioredoxin reductase and of thioredoxin with an unusual redox-active centre from anaerobic amino-acid-utilizing bacteria.Microbiology (UK)144, 393–400 (1998).
Hassett R.F., Romeo A.M., Kosman D.J.: Regulation of high affinity iron uptake in the yeastS. cerevisiae. Role of dioxygen and Fe(II).J. Biol. Chem.273, 7628–7636 (1998).
Hayes C.S., Klades-Aguiar B., Casillas-Martinez L., Setlow P.:In vitro andin vivo oxidation of methionine residues in small, acid-soluble spore proteins ofBacillus species.J. Bacteriol.180, 2694–2700 (1998).
Hayflick L.: Cell biology of aging.Fed. Proc.38, 1847–1850 (1979).
Hengge-Aronis R.: Survival of hunger and stress: the role ofrpoS in early stationary phase gene regulation inE. coli.Cell72, 165–168 (1993).
Henle E.S., Linn S.: Formation, prevention and repair of DNA damage by iron/hydrogen peroxide.J. Biol. Chem.272, 19095–19098 (1997).
Herbert V.: Prooxidant effects of antioxidant vitamins.J. Nutr.126, 1197S-1200S (1996).
Hetts S.W.: To die or not to die. An overview, of apoptosis and its role in disease.J. Amer. Med. Assoc.279, 300–307 (1998).
Hidalgo E., Ding H., Demple B.: Redox signal transductionvia iron-sulfur clusters in the SoxR transcription activator.Trends Biochem. Sci.22, 207–210 (1997).
Higgins C.F.: ABC transporters: from microorganisms to man.Ann. Rev. Cell Biol.8, 67–113 (1992).
Hjerde T., Stokke B.T., Smidsrød O., Christensen B.E.: Free-radical degradation of triple-stranded scleroglucan by hydrogen peroxide and ferrous ions.Carbohydr. Polymers37, 41–48 (1998).
Hochman A.: Programmed cell death in prokaryotes.Crit. Rev. Microbiol.23, 207–214 (1997).
Hoehler D., Marquardt R.R., McIntosh A.R., Madhyastha S.: Free radical-mediated lipid peroxidation induced by T-2 toxin in yeast (Kluyveromyces marxianus).J. Nutr. Biochem.9, 370–379 (1998).
Holmgren A.: Thioredoxin and glutaredoxin.J. Biol. Chem.264, 13963–13969 (1989).
Howlett N.G., Avery S.V.: Induction of lipid peroxidation during heavy metal stress inS. cerevisiae and influence of plasma membrane fatty acid unsaturation.Appl. Environ. Microbiol.63, 2971–2976 (1997).
Imlay J.A., Linn S.: DNA damage and oxygen radical toxicity.Science240, 1302–1309 (1988).
Ink B., Zörnig M., Baum B., Hajibagheri N., James C., Chittenden T., Evan G.: Human Bak induces cell death inSchizosaccharomyces pombe with morphological changes similar to those with apoptosis in mammalian cells.Mol. Cell Biol.17, 2468–2474 (1997).
Irani K., Goldschmidt-Clermont P.J.: Ras, superoxide and signal transduction.Biochem. Pharmacol.55: 1339–1346 (1998).
Iuchi S., Weiner L.: Cellular and molecular physiology ofEscherichia coli in the adaptation to aerobic environments.J. Biochem.120, 1055–1063 (1996).
Jäättelä M., Wissing O., Kokholm K., Kallunki T., Egeblad D.: Hsp 70 exerts its anti-apoptotic function downstream of caspase-3-like proteases.EMBO J.21, 6124–6134 (1998).
Jacobson M.D., Weil M., Raff M.C.: Programmed cell death in animal development.Cell88, 347–354 (1997).
Jakubowski W., Bartosz G.: Estimation of oxidative stress inSaccharomyces cerevisiae with fluorescent probes.Internat. J. Biochem. Cell Biol.29, 1297–1301 (1997).
Jakubowski W., Ertel D., Bilinski T., Kędziora J., Bartosz G.: Luminol luminescence induced by oxidants in antioxidant-deficient veastsS. cerevisiae.Biochem. Mol. Biol. Internat.45, 191–203 (1998).
Jamieson D.J.:Saccharomyces cerevisiae has distinct adaptive responses to both hydrogen peroxide and menadione.J. Bacteriol.174, 6678–6681 (1992).
Jamieson D.J.: The effect of oxidative stress onSaccharomyces cerevisiae.Redox Report1, 89–95 (1995).
Janda S., Tauchová R.: Cyanide and antimycin A resistant respiration and uptake of 6-deoxy-d-glucose inRhodotorula glutinis.Cell. Mol. Biol.28, 547–553 (1982).
Janda S., Beneš L., Opekarová M., Šťastná J., Tauchová R.: Effect of hydrogen peroxide on the aerobic yeastRhodotorula glutinis.Microbios Lett.43, 37–42 (1990).
Jazwinski S.M.: Replication control and cellular life span.Exp. Gerontol.24, 423–436 (1989).
Jazwinski S.M.: Genes of youth: genetics of aging in baker's yeast.ASM News 172–178 (1993).
Jazwinski S.M.: Longevity, genes and aging.Science273, 54–59 (1996).
Jensen R.B., Gerdes K.: Programmed cell death in bacteria: protein plasmid stabilization systems.Mol. Microbiol.17, 205–210 (1995).
Jimenez Del Rio M., Velez Pardo C., Pinxteren J., De Potter W., Ebinger G., Vauquelin G.: Binding of serotonin and dopamine to “serotonin binding proteins” in bovine frontal cortex: evidence for iron-induced oxidative mechanisms.Eur. J. Pharmacol.15, 11–21 (1993).
Johnson E.A., Levine R.L., Lin C.C.: Inactivation of glycerol dehydrogenase ofKlebsiella pneumoniae and the role of divalent cations.J. Bacteriol.164, 479–483 (1985).
Kaneko T., Tahara S., Matsuo M.: Non-linear accumulation of 8-hydroxy-2-deoxyguanosine, a marker of oxidized DNA damage, during aging.Mutat. Res.316, 277–285 (1996).
Karahalil B., Roldan-Arjona T., Dizdaroglu M.: Substrate specificity ofSchizosaccharomyces pombe Nth protein for products of oxidative DNA damage.Biochemistry37, 590–595 (1998).
Karam L.R., Bergtold D.S., Simic M.G.: Biomarkers of radical damagein vivo.Free Radicals Res. Commun.12–13, 11–16 (1991).
Kaur T., Singh S., Dhawan V., Ganguly N.K.:Shigella dysenteriae type 1 toxin induced lipid peroxidation in enterocytes isolated from rabbit ileum.Mol. Cell. Biochem.178, 169–179 (1998).
Kawasaki L., Wysong D., Diamond R., Aguire J.: Two divergent catalase genes are differentially regulated duringAspergillus nidulans development and oxidative stress.J. Bacteriol.179, 3284–3292 (1997).
Kell D.B., Kaprelyants A.S., Weichart D.H., Harwood C.R., Barer M.R.: Viability and activity of readily culturable bacteria: a review and discussion of the practical issues.Antonie van Leeuwenhoek73, 169–187 (1998).
Kemper M.A., Doyle R.J.: Cell wall ofBacillus subtilis is protonated during growth, pp. 245–252 inBacteria Growth and Lysis (E.M. de Pedro, Ed.), Plenum Press, New York 1993.
Kemper M.A., Urrutia M.M., Beveridge T.J., Koch A.L., Doyle R.J.: Proton motive force may regulate cell wall-associated enzymes ofBacillus subtilis.J. Bacteriol.175, 5690–5696 (1993).
Kennedy B.K., Austriaco N.R. Jr.,Zhang J., Guarente L.: Mutation in the silencing gene SIR4 can delay aging inS. cerevisiae.Cell80, 485–496 (1995).
Khan A.U., Kasha M.: Singlet molecular oxygen in the Haber-Weiss reaction.Proc. Nat. Acad. Sci. USA91, 12365–12367 (1994).
Khan A.U., Wilson T.: Reactive oxygen species as cellular messengers.Chem. Biol.2, 437–445 (1995).
Kim I.S., Stiefel A., Plantör S., Angerer A., Braun V.: Transcription induction of the ferric citrate transport genesvia the N-terminus of the FecA outer membrane protein, the Ton system and the electrochemical potential of the cytoplasmic membrane.Mol. Microbiol.23, 333–344 (1997).
Kirkland J.B.: Lipid peroxidation, protein thiol oxidation and DNA damage in hydrogen peroxide-induced injury to endothelial cells: role of activation of poly(ADP-ribose) polymerase.Biochim. Biophys. Acta1092, 319–325 (1991).
Klebanoff S.J., Waltersdorph A.M., Michel B.R., Rosen H.: Oxygen-based free radical generation by ferrous ions and desferrioxamine.J. Biol. Chem.264, 19765–19771 (1989).
Krems B., Charizanis C., Entian K-D.: The response regulator-like protein Pos9/Skn7 ofSaccharomyces cerevisiae is involved in oxidative stress resistance.Curr. Genet.29, 327–334 (1996).
Kretschmer S.: Reversion sporulierenderBacillus megaterium-Zellen zum Wachstum.Z. Allg. Mikrobiol.12, 459–467 (1972).
Kroemer G., Zamzami N., Susin S.A.: Mitochondrial control of apoptosis.Immunol. Today18, 44–51 (1997).
Kučerová H., Chaloupka J.: Intracellular serine proteinase behaves as a heat-stress protein in nongrowing but as a cold-stress protein in growing populations ofBacillus megaterium.Curr. Microbiol.31, 39–43 (1995).
Lahiri B., Lai P.S., Pousada M., Stanton D., Danishefsky I.: Depolymerization of heparin by complexed ferrous ions.Arch. Biochem. Biophys.293, 54–60 (1992).
Lapshina E.A., Jaruga E., Bilinski T., Bartosz G.: What determines the antioxidant potential of yeast cells?Biochem. Mol. Biol. Internat.37, 903–908 (1995).
Laval J.: Role of DNA repair enzymes in the cellular resistance to oxidative stress.Pathol. Biol.44, 14–24 (1996).
Lawrence G.D.: Ethylene formation from methionine and its analogs, pp. 157–163 inCRC Handbook for Oxygen Radical Research (R.A. Greenwald, Ed.), CRC Press, Boca Raton 1985.
Lee C.L., Kang S.O.:d-erythro-Ascorbic acid is an important antioxidant molecule inS. cerevisiae.Mol. Microbiol.30, 895–903 (1999).
Lee J.K., Kim J.M., Kim S.W., Nam Doo Hyun, Yong C.S., Huh K.: Effect of copper ion on oxygen damage in superoxide dismutase-deficientS. cerevisiae.Arch. Pharm. Res.19, 178–182 (1996).
Lehmann Y., Meile L., Teuber M.: Rubrerythrin fromClostridium perfringens: cloning of the gene, purification of the protein, and characterization of its superoxide-dismutase function.J. Bacteriol.178, 7152–7158 (1996).
Leke N., Grenier D., Goldner M., Mayrand D.: Effect of hydrogen peroxide on growth and selected properties ofPorphyromonas gingivalis.FEMS Microbiol. Lett.174, 347–353 (1999).
Lessuise E., Simon M., Klein R., Labbe P.: Excretion of anthranilate and 3-hydroxyanthranilate byS. cerevisiae: relationship to iron metabolism.J. Gen. Microbiol.138, 85–89 (1992).
Lessuise E., Simon-Casteras M., Labbe P.: Siderophore-mediated iron uptake inS. cerevisiae: theSST1 gene encodes a ferrioxamine B permease that belongs to the major facilitator superfamily.Microbiology (UK)144, 3455–3462 (1998).
Lesuisse E., Simon M., Klein R., Labbe P.: Excretion of anthranilate and 3-hydroxyanthranilate byS. cerevisiae: relationship to iron metabolism.J. Gen. Microbiol.138, 85–89 (1992).
Levin J.D., Johnson A.W., Demple B.: HomogeneousEscherichia coli endonuclease IV.J. Biol. Chem.236, 8066–8071 (1988).
Levine A., Tenkaken R., Dixon R., Lamb C.: H2O2 from the oxidative burst orchestrates the plant hypersensitive disease resistant response.Cell79, 583–593 (1994).
Levine R.L., Oliver C.N., Fulks R.M., Stadtman E.R.: Turnover of bacterial glutamine synthetase: oxidative inactivation precedes proteolysis.Proc. Nat. Acad. Sci. USA78, 2120–2124 (1981).
Levine R.L., Garland D., Oliver C.N., Amici A., Climent I., Lenz A.G., Ahn B.W., Shaltiel S., Stadtman E.R.: Determination of carbonyl content in oxidatively modified proteins.Meth. Enzymol.186, 464–478 (1990).
Levine R.L., Berlett B.S., Moskowitz J., Mosoni L., Stadtman E.R.: Methionine residues may protect proteins from critical oxidative damage.Mechan. Ageing Develop.107, 323–332 (1999).
Li B., Gutierrez P.L., Blough N.V.: Trace determination of hydroxyl radical using fluorescence detection.Meth. Enzymol.300, 202–216 (1999).
Li L., Kaplan J.: Characterization of two homologous yeast genes that encode mitochondrial iron transporters.J. Biol. Chem.272, 28485–28493 (1997).
Liebler D.C., Stratton S.P., Kaysen K.L.: Antioxidant actions of β-carotene in liposomal and microsomal membranes: role of carotenoid-membrane incorporation and α-tocopherol.Arch. Biochem. Biophys.338, 244–250 (1997).
Ligr M., Madeo F., Fröhlich E., Hilt W., Fröhlich K.-U., Wolf D.: Mammalian Bax triggers apoptotic changes in yeast.FEBS Lett.438, 61–65 (1998).
Lin Y.J., Seroude L., Benzer S.: Extended life-span and stress resistance in theDrosophila mutant methuselah.Science282, 943–946 (1998).
Liu C.-J., Chopra A.K., Strnadová M., Chaloupka J.: Degradation of abnormal proteins in growing yeast.FEMS Microbiol. Lett.21, 313–317 (1984).
Liu S.: Generating, partitioning, targeting and functioning of superoxide in mitochondria.Biosci. Rep.17, 259–272 (1997).
Ljungquist S., Lindahl T., Howard-Flanders P.: Methylmethanesulfonate-sensitive mutant ofEscherichia coli deficient in endonuclease specific for apurinic sites in deoxyribonucleic acid.J. Bacteriol.126, 646–653 (1976).
Longo V.D., Gralla E.B., Valentine J.S.: Superoxide dismutase activity is essential for stationary phase survival inSaccharomyces cerevisiae. Mitochondrial production of toxic oxygen speciesin vivo.J. Biol. Chem.271, 12275–12280 (1996).
Longo V.D., Ellerby L.N., Bredesen D.E., Valentine J.S., Gralla E.B.: Human Bcl-2 reverses survival defects in yeast lacking superoxide dismutase and delays death of wild-type yeast.J. Cell Biol.137, 1581–1588 (1997).
Longo V.D., Liou L.-L., Valentine J.S., Gralla E.B.: Mitochondrial superoxide decreases yeast survival in stationary phase.Arch. Biochem. Biophys.365, 131–142 (1999).
Lowett C.M. Jr.,O'Gara T.M., Woodruff J.N.: Analysis of the SOS inducing signal inBacillus subtilis usingEscherichia coli LexA as a probe.J. Bacteriol.176, 4914–4923 (1994).
Lundquist H., Dahlgren C.: Isoluminol-enhanced chemiluminescence: a sensitive method to study the release of superoxide anion from human neutrophils.Free Radicals Biol. Med.20, 785–792 (1996).
Lupo S., Aranda C., Miranda-Ham L., Olivera H., Riego L., Servin L., González A.: Tyrosine is involved in protection from oxidative stress inS. cerevisiae.Can. J. Microbiol.43, 963–970 (1997).
Luzzatto E., Cohen H., Stockheim C., Wieghardt K., Meyerstein D.: Reactions of low valent transition metal complexes with hydrogen peroxide. Are they “Fenton-like” or not?Free Radicals Res.23, 453–463 (1995).
Lynch M.C., Kuramitsu H.K.: Role of superoxide dismutase in physiology ofPorphyromonas gingivalis.Infect. Immun.67, 3367–3375 (1999).
Madeo F., Fröhlich E., Fröhlich K.-U.: A yeast mutant showing diagnostic markers of early and late apoposis.J. Cell Biol.139, 729–734 (1997).
Madeo F., Fröhlich E., Ligr M., Grey M., Sigrist S.J., Wolf D.H.: Oxygen stress: a regulator of apoptosis in yeast.J. Cell Biol.145, 757–767 (1999).
Marcillat O., Zhang Y., Lin S.W., Davies K.J.A.: Mitochondria contain a proteolytic system which can recognize and degrade oxidatively-denatured proteins.Biochem. J.254, 677–683 (1988).
Marquis R.E., Sim J., Shin S.Y.: Molecular mechanisms of resistance to heat and oxidative damage.J. Appl. Bacteriol.76, 40S-48S (1994).
Mason C.A., Hamer G., Bryers J.D.: The death and lysis of microorganisms in environmental processes.FEMS Microbiol. Rev.39, 373–401 (1986).
Mason R.P.:In vitro andin vivo detection of free radical metabolites with electron spin resonance, pp. 11–24 inFree Radicals: A Practical Approach (N.A. Punchard, F.J. Kelly, Eds). Oxford University Press, Oxford 1996.
Mason R.P.: Electron spin resonance investigations of free radical toxicology, pp. 1–27 inFree Radicals in Biology and Environment (F. Minisci, Ed.). Kluyver Academic Publishers, Dordrecht-Boston-London 1997.
McKenna W.R., Mickelsen P.A., Sparling P.F., Dyer D.W.: Iron uptake from lactoferrin and transferrin byNeisseria gonorrhoeae.Infect. Immun.56, 785–791 (1988).
Meriin A.B., Yaglom J.A., Gabai V., Mosser D.D., Zon L., Sherman M.Y.: Protein-damaging stress activates c-Jun N-terminal kinasevia inhibition of its dephosphorylation: a novel pathway controlled by HSP72.Mol. Cell Biol.19, 2547–2555 (1999).
Michaels M.L., Miller J.H.: The GO system protects organisms from the mutagenic effects of the spontaneous lesion 8-hydroxy-guanine (7,8-dihydro-8-oxoguanine).J. Bacteriol.174, 6321–6325 (1992).
Mignotte B., Wayssiere J.-L.: Mitochondria and apoptosis.Eur. J. Biochem.252, 1–15 (1998).
Mishra O.P., Delivoria-Papadopoulos M., Cahillane G., Wagerle L.C.: Lipid peroxidation as the mechanism of modification of the affinity of the Na+, K+-ATPase active sites for ATP, K+, Na+, and strophanthidinin vitro.Neurochem. Res.14, 845–851 (1989).
Miyake T., Hazu T., Yoshida S., Kanayama M., Tomochika K., Shinoda S., Ono B.: Glutathione transport systems of the budding yeastS. cerevisiae.Biosci. Biotechnol. Biochem.62, 1858–1864 (1998).
Mlakar A., Spiteller G.: 2-Hydroxysuccinaldehyde, a lipid peroxidation product proving that polyunsaturated fatty acids are able to react with three molecules of oxygen.Free Radicals Res.26, 57–62 (1997).
Mohr S., Zech B., Lapetina E.G., Grüne B.: Inhibition of caspase-3 by S-nitrosation and oxidation caused by nitric oxide.Biochem. Biophys. Res. Commun.238 387–391 (1997).
Moore M.M., Breedveld M.W., Autor A.P.: The role of carotenoids in preventing oxidative damage in the pigmented yeast,Rhodotorula mucilaginosa.Arch. Biochem. Biophys.270, 419–431 (1989).
Moore C.H., Foster L.-A., Gerbig D.G., Dyer D.W., Gibson B.W.: Identification of alcaligin as the siderophore produced byBordetella pertussis andBordetella bronchiseptica.J. Bacteriol.117, 1116–1118 (1995).
Moradas-Ferreira P., Costa V., Piper P., Mager W.: The molecular defenses against reactive oxygen species in yeast.Mol. Microbiol.19, 651–658 (1996).
Nash H.M., Brunner S.D., Scharer O.D., Kawate T., Addona T.A., Spooner E., Lane W.S., Verdine G.L.: Cloning of a yeast 8-oxoguanine DNA glycosylase reveals the existence of a base-excision DNA-repair protein superfamily.Curr. Biol.6, 968–980 (1996).
Nebe-von Caron G., Stephens P., Badley R.A.: Assessment of bacterial viability status by flow cytometry and single cell sorting.J. Appl. Microbiol.84, 988–998 (1998).
Newcomb T.G., Loeb L.A.: Oxidative DNA damage and mutagenesis, pp. 65–84 inDNA Damage and Repair, Vol. I. DNA Repair in Prokaryotes and Lower Eukaryotes (J.A. Nickoloff, M.F. Hoekstra, Eds) Humana Press, Fotowa (NJ) 1998.
Niki E.: Free radical initiators as source of water- or lipid-soluble peroxyl radicals.Meth. Enzymol.186, 100–108 (1990).
Niven G.W., Mulholland F.: Cell membrane integrity and lysis inLactobacillus lactis: the detection of a population of permeable cells in post-logarithmic phase cultures.J. Appl. Microbiol.84, 90–96 (1998).
Noguchi N., Yamashita H., Gotoh, N., Yamamoto Y., Numano R., Niki E.: 2,2′-Azobis(4-methoxy-2,4-dimethylvaleronitrile), a new soluble azo initiator: application to oxidations of lipids and low-density lipoprotein in solution and in aqueous dispersions.Free Radicals Biol. Med.24, 259–268 (1997).
Nordmann R., Ribière C., Rouach H.: Ethanol-induced lipid peroxidation and oxidative stress in extrahepatic tissues.Alcohol & Alcoholism25, 231–237 (1990).
Nyström T.: To be or not to be: the ultimate decision of the growth-arrested bacterial cell.FEMS Microbiol. Rev.21, 283–290 (1998).
Ohsumi Y., Kitamoto K., Anraku Y.: Changes induced in the permeability barrier of the yeast plasma membrane by cupric ion.J. Bacteriol.170, 2676–2682 (1988).
Okada S., Zhang H., Hatano M., Tokuhisa T.: A physiological role of Bcl-x(L) induced in activated macrophages.J. Immunol.160, 2590–2596 (1998).
Olie R.A., Durrieu F., Cornillon S., Longran G., Gross J., Earnshow W.C., Goldstein P.: Apparent caspase independence of programmed cell death inDictyostelium.Curr. Biol.8, 955–958 (1998).
Oliver C.N., Levine R.E., Stadtman E.R.: A role of mixed-function oxidation reactions in the accumulation of altered enzyme forms during aging.J. Amer. Geriatrics Soc.35, 947–956 (1987).
Osiewacz H.D.: Genetic regulation of aging.J. Mol. Med.75, 715–727 (1997).
Ou P.M., Tritchler H.J., Wolff S.P.: Thioctic (lipoic) acid: a therapeutic metal-chelating antioxidant.Biochem. Pharmacol.50, 123–126 (1995).
Pahl H.L., Baeuerle P.A.: Oxygen and control of gene expression.Bioassays16, 497–502 (1994).
Palop A., Rutherford G.C., Marquis R.E.: Inactivation of enzymes within spores ofBacillus megaterium ATCC 19213 by hydroperoxides.Can. J. Microbiol.44, 465–470 (1998).
Papa S., Guerrieri F., Capitanio N.: A possible role of slips in cytochrome-c oxidase in the antioxygen defense system of the cell.Biosci. Rep.17, 23–31 (1997).
Patel M.P., Marcinkeviciene J., Blanchard J.S.:Enterococcus faecalis glutathione reductase: purification, characterization and expression under normal and hyperbaric O2 conditions.FEMS Microbiol. Lett.166, 155–163 (1998).
Pedersen K., Gerdes K.: Multiple hok genes on the chromosome ofEscherichia coli Mol. Microbiol.32, 1090–1102 (1992).
Perego P., Howell S.B.: Molecular mechanisms controlling sensitivity to toxic metal ions in yeast.Toxicol. Appl. Pharmacol.147, 312–318 (1997).
Petit P.X., Susin S.-A., Zamzami N., Mignotte B., Kroemer G.: Mitochondria and cell death: back to the future.FEBS Lett.396, 7–13 (1996).
Postgate J.R., Hunter J.R.: The survival of starved bacteria.J. Gen. Microbiol.29, 233–263 (1962).
Pressler U., Staudenmaier H., Zimmermann L., Braun V.: genetics of the iron dicitrate transport system ofEscherichia coli.J. Bacteriol.170, 2716–2724 (1988).
Pushkareva M., Obeid L.M., Hannum Y.A.: Ceramide: an endogenous regulator of apoptosis and growth suppression.Immunol. Today.16, 294–297 (1995).
Raguzzi F., Lessuise E., Crichton R.R.: Iron storage inS. cerevisiae.FEBS Lett.231, 253–258 (1988).
Rice-Evans C.A., Diplock A.T., Symoss M.C.R.:Tech. Free Radical Research. pp. 207–234. Elsevier, Amsterdam-London-New York-Tokyo 1991.
Rice-Evans C., Sampson J., Bramley P.M., Holloway D.E.: Why do we expect carotenoids to be antioxidantsin vivo?Free Radicals Res.26, 381–398 (1997).
Ridgley E., Xiong Z., Ruben L.: Reactive oxygen species activate a Ca2+-dependent cell death pathway in the unicellular organismTrypanosoma brucei.Biochem. J.340, 33–40 (1999).
Rikans L.E., Hornbrook K.R.: Lipid peroxidation, antioxidant protection and aging.Biochim. Biophys. Acta1362, 116–127 (1997).
Rocha E.R., Selby T., Coleman J.P., Smith C.J.: Oxidative stress response in an anaerobe,Bacteroides fragilis: a role for catalase in protection against hydrogen peroxide.J. Bacteriol.178, 6895–6903 (1996).
Rocha E.R., Smith C.J.: Regulation ofBacteroides fragilis katB mRNA by oxidative stress and carbon limitation.J. Bacteriol.179, 7033–7039 (1997).
Rocha E.R., Smith C.J.: Characterization of a peroxide-resistant mutant of the anaerobic bacteriumBacteroides fragilis.J. Bacteriol.180, 5906–5912 (1998).
Roldan-Arjona T., Anselmino C., Lindahl T.: Molecular cloning and functional analysis of aSchizosaccharomyces pombe homologue ofEscherichia coli endonuclease III.Nucl. Acids Res.24, 3307–3312 (1996).
Roze L.V., Linz J.E.: Lovastain triggers an apoptosis-like cell death in the fungusMucor racemosus.Fungal Genet. Biol.25, 119–133 (1998).
Sakagami H., Kuribayashi N., Iida M., Hagiwara T., Takahashi H., Yoshida H., Shiota F., Ohata H., Momose K., Takeda M.: The requirement for and mobilization of calcium during induction by sodium ascorbate and by hydrogen peroxide of cell death.Life Sci.58, 1131–1138 (1996).
Sakamoto T., Delgaizo V.B., Bryant D.A. Growth on urea can trigger death and peroxidation of the cyanobacteriumSynechococcus sp. strain PC 7002.Appl. Environ. Microbiol.64, 2361–2366 (1998).
Santiago L.A., Mori A.: Antioxidant defenses of baker's yeast against free radicals and lipid peroxides in rat brain.Arch. Biochem. Biophys.306, 16–21 (1993).
Santos-Ocana C., Córdoba F., Crane F.L., Clarke C.F., Navas P.: Coenzyme Q6 and iron reduction are responsible for the extracellular ascorbate stabilization at the plasma membrane ofS. cerevisiae.J. Biol. Chem.273, 8099–8105 (1998).
Saran M., Bors W.: Direct and indirect measurements of oxygen radicals.Klin. Wochenschr.69, 957–964 (1991).
Saran M., Michel C., Bors W.: Radical functionsin vivo: a critical review of current concepts and hypothesesZ. Naturforsch.53c, 210–227 (1998).
Schroeder W.A., Johnson E.A.: Antioxydant role of carotenoids inPhaffia rhodozyma.J. Gen. Microbiol.139, 907–912 (1993).
Schubert J., Wilmer J.W.: Does hydrogen peroxide exist “free” in biological systems?Free Radicals Biol. Med.11 545–555 (1991).
Sen S.: Programmed cell death: concept, mechanism and control.Biol. Rev.67, 287–319 (1992).
Shaham S., Schuman M.A., Herskowitz I.: Death-defying yeast identify novel apoptosis genes.Cell92, 425–427 (1998).
Shamsi F.A., Hadi S.M.: Photoinduction of strand scission in DNA by uric acid and Cu(II).Free Radicals Biol. Med.19, 189–196 (1995).
Shen B., Jensen R.G., Bohnert H.J.: Mannitol protects against oxidation by hydroxyl radicals.Plant Physiol.115, 527–532 (1997).
Siegele D.A., Kolter R.: Life after log.J. Bacteriol.174, 345–348 (1992).
Sies H.: Biochemistry of oxidative stress.Angew. Chem. Internat. Edn. Engl.25, 1058–1071 (1986).
Sies H.:Oxidative Stress: Oxidants and Antioxidants. Academic Press, London 1993.
Sies H.: Impaired endothelial and smooth muscle cell function in oxidative stress.Exp., Physiol.82, 291–295 (1997).
Sigler K., Gille G.: Stability and refractoriness of the high catalase activity in the oxidative-stress-resistant fission yeastSchizosac-charomyces pombe Folia Microbiol.43, 369–372 (1998).
Sigler K., Gille G., Vacata V., Stadler N., Höfer M.: Inactivation of the plasma membrane ATPase ofSchizosaccharomyces pombe by hydrogen peroxide and by the Fenton reagent (Fe2+/H2O2): nonradicalvs. radical-induced oxidation.Folia Microbiol.43, 361–367 (1998a).
Sigler K., Denksteinová B., Gášková D., Stadler N., Radovanović N., Höfer M.: Effect of stressors on yeast plasma membrane integrity, proton gradient and H+-ATPase function.Folia Microbiol.43, 229–230 (1998b).
Simizu S., Takada M., Umezawa K., Imoto M.: Requirement of caspase-3(-like) protease-mediated hydrogen peroxide production for apoptosis induced by various anticancer drugs.J. Biol. Chem.273, 26900–26907 (1998).
Sinclair D.A., Mills K., Guarente L.: Molecular mechanisms of yeast aging.Trends Biochem. Sci.23, 131–134 (1998).
Skoneczny M., Chelstowska A., Rytka J.: Study of the coinduction by fatty acids of catalase A and acyl-CoA oxidase in standard and mutantS. cerevisiae strains.Eur. J. Biochem.174, 297–302 (1988).
Skulachev V.P.: Why are mitochondria involved in apoptosis? Permeability transition pores and apoptosis as selective mechanisms to eliminate superoxide-producing mitochondria and cell.FEBS Lett.397, 7–10 (1996).
Skulachev V.P.: Cytochromec in the apoptotic and antioxidant cascades.FEBS Lett.423, 275–280 (1998).
Smirnoff N.: The function and metabolism of ascorbic acid in plants.Ann. Bot.78, 661–669 (1996).
Smith D.W., Hanawalt P.C.: Macromolecular synthesis and thymineless death inMycoplasma laidlawii B.J. Bacteriol96, 2066–2076 (1968).
Smith J.R., Pereira-Smith O.M.: Replicative senescence.: implications forin vivo aging and tumor suppression.Science273, 63–67 (1996).
Sohal R.S., Allen R.G.: Oxidative stress as a causal factor in differentiation and aging: a unifying hypothesis.Exp. Gerontol25, 499–522 (1990).
Sohal R.S., Weindruch R.: Oxidative stress, caloric restriction and aging.Science273, 59–63 (1996).
Soszyński M., Bartosz G.: Decrease in accessible thiols as an index of oxidative damage to membrane proteins.Free Radicals Biol. Med.23, 463–469 (1997).
Stadtman E.R.: Oxidation of proteins by mixed function oxidation systems: implication in protein turnover, aging and neutrophil function.Trends Biochem. Sci.11, 11–12 (1986).
Stadtman E.R.: Protein oxidation and aging.Science257, 1220–1224 (1992).
Stahl W., Sies H.: Antioxidant defense: vitamins E and C and carotenoids.Diabetes46 (Suppl. 2), S14-S17 (1997).
Stephen D.W.S., Jamieson D.J.: Glutathione is an important antioxidant molecule in the yeastS. cerevisiae.FEMS Microbiol. Lett.141, 207–212 (1996).
Stephens C.: Bacterial sporulation: a question of commitment?Curr. Biol.8, R45-R48 (1998).
Stewart E.J., Aslund F., Beckwith J.: Disulfide bond formation in theEscherichia coli cytoplasm: anin vivo role reversal for the thioredoxins.EMBO J.17, 5543–5550 (1998).
Stewart M.C., Olson B.H: Physiological studies of chloramine resistance developed byKlebsiella pneumoniae under low-nutrient growth conditions.Appl. Environ. Microbiol.58, 2918–2927 (1992).
Storz G., Tartaglia L.A., Farr S.B., Ames B.N.: Bacterial defences against oxidative stress.Trends Genet.6, 363–368 (1990).
Streiblová E.: Study of scar formation in the life cycle of heterothallicSaccharomyces cerevisiae.Can. J. Microbiol.16, 827–831 (1970).
Strnadová M., Votruba J., Chaloupka J.: Turnover kinetics of proteins labeled in different sporulation phases ofBacillus megaterium.Folia Microbiol.37, 163–168 (1992).
Suzuki Y.J., Edmondson J.D., Ford G.D.: Inactivation of rabbit muscle creatine kinase by hydrogen peroxide.Free Radicals Res. Commun.16, 131–136 (1992).
Taborsky G.: Oxidative modification of proteins in the presence of ferrous ion and air. Effect of ionic constituents of the reaction medium on the nature of the oxidation products.Biochemistry12, 1341–1348 (1973).
Takeuchi T., Nakaya Y., Kato N., Watanabe K., Morimoto K.: Induction of oxidative DNA damage in anaerobes.FEBS Lett.450, 178–180 (1999).
Tamarit J., Cabiscol E., Ros J.: Identification of the major oxidatively damaged proteins inEscherichia coli cells exposed to oxidative stress.J. Biol. Chem.273, 3027–3032 (1998).
Tanioka S., Matsui Y., Irie T., Tanigawa T., Tanaka Y., Shibata H., Sawa Y., Kono Y.: Oxidative depolymerization of chitosan by hydroxyl radical.Biosci. Biotech. Biochem.60, 2001–2004 (1996).
Tao W., Kurschner C., Morgan J.I.: Modulation of cell death in yeast by the Bcl-2 family of proteins.J. Biol. Chem.272, 15547–15552 (1997).
Tesoriere L., Bongiorno A., Pintaudi A.M., Anna R.D., Arpa D.D., Livrea, M.A.: Synergistic interactions between vitamin A and vitamin E against lipid peroxidation in phosphatidylcholine liposomes.Arch. Biochem. Biophys.326, 57–63 (1996).
Thomas D., Scott A.D., Barbey R., Padula M., Boiteux S.: Inactivation ofOGGI increases incidence of GC-TA transversions inSaccharomyces cerevisiae: evidence for endogenous oxidative damage to DNA in eukaryotic cells.Mol. Gen. Genet.254, 171–178 (1997).
Toledo I., Aguirre J., Hansberg W.: Enzyme inactivation related to a hyperoxidant stage during conidiation ofNeurospora crassa.Microbiology (UK)140, 2391–2397 (1994).
Toledo I., Hansberg W.: Protein oxidation related to morphogenesis inNeurospora crassa.Exp. Mycol.14, 184–189 (1990).
Tsuchihashi H., Kigoshi M., Iwatsuki M., Niki E.: Action of β-carotene as an oxidant against lipid peroxidation.Arch. Biochem. Biophys.323, 137–147 (1995).
Tsujimoto Y.: Apoptosis and necrosis: intracellular ATP levels as a determinant for cell death modes.Cell Death Different4, 429–434 (1997).
Uchida K., Kawakishi S.: Oxidative degradation of β-cyclodextrin induced by an ascorbic acid-copper ion system.Agric. Biol. Chem.50, 367–373 (1986a).
Uchida K., Kawakishi S.: Oxidative depolymerization of polysaccharides induced by the ascorbic acid-copper ion systems.Agric. Biol. Chem.50, 2579–2583 (1986b).
Váchová L., Kučerová H., Benešová J., Chaloupka J.: Heat and osmotic stress enhance the development of cytoplasmic serine proteinase activity in sporulatingBacillus megaterium.Biochem. Mol. Biol. Internat.32, 1049–1057 (1994).
Valentine J.S., Wertz D.L., Lyons T.J., Liou L.-L., Goto J.J., Gralla E.B.: The dark side of dioxygen biochemistry.Curr. Opinion Chem. Biol.2, 253–262 (1998).
Van Acker S.A.B.E., van den Berg D.-J., Tromp M.N.J.L., Griffioden D.H, van Bennekom W.P., van der Vugh W.J.F., Bast A.: Structural aspects of antioxidant activity of flavonoids.Free Radicals Biol. Med.20, 331–342 (1996).
Van der Kemp P.A., Thomas D., Barbey R., De Oliveira, R., Boiteux S.: Cloning and expression inEscherichia coli of theOGG1 gene ofSaccharomyces cerevisiae, which codes for a DNA glycosylase that excises 7,8-dihydro-8-oxoguanine and 2,6-diamino-4-hydroxy-5-N-methylformamidopyrimidine.Proc. Nat. Acad. Sci. USA93, 5197–5202 (1996).
Vile G.F., Rothwell L.A., Kettle A.J.: Hypochlorous acid activates the tumor suppressor protein p53 in cultured human skin fibroblasts.Arch. Biochem. Biophys.359 51–56 (1998).
Visick J.E., Clarke S.: Repair, refold, recycle: how bacteria can deal with spontaneous and environmental damage to proteins.Mol. Microbiol.16, 835–845 (1995).
Wang J.Y.J.: Cellular responses to DNA damage.Curr. Opin. Cell. Biol.10, 240–247 (1998).
Wei Y.-H.: Oxidative stress and mitochondrial DNA mutation in human aging.Proc. Soc. Exp. Biol. Med.217, 53–63 (1998).
Weiss, B.: Endonuclease II ofEscherichia coli is exonuclease III.J. Biol. Chem.251, 1896–1901 (1976).
Welburg S.C., Barcinski N.A., Williams G.T.: Programmed cell death in trypanosomatides.Parasitol. Today13, 22–25 (1997).
West S.C.: Enzymes and molecular mechanisms of genetic recombination.Ann. Rev. Biochem.61, 603–640 (1992).
West W.: Introductory survey of molecular spactra, p. 37 in W. West (Ed.):Technique in Organic Chemistry, Vol. 9. Chemical Applications of Spectroscopy. Interscience Publishers, New York-London 1956.
Willie A.H.: Apoptosis and carcinogenesis.,Eur. J. Cell Biol.73, 189–197 (1997).
Winterbourn C.C.: Toxicity of iron and hydrogen peroxide: the Fenton reaction.Toxicol. Lett.82–83, 969–974 (1995).
Wiśnicka R., Krzepilko A., Wawryn J., Krawiec Z., Biliński T.: Protective role of superoxide dismutase in iron toxicity in yeast.Biochem. Mol. Biol. Internat.44, 635–641 (1998).
Wolff S.P., Dean R.T.: Glucose autoxidation and protein modification.Biochem. J.245, 243–250 (1987).
Wright N.E., Han D.K., Carter L., Fields S., Schwartz S.M., Hockenbery D.M.: Caspase-3 inhibits growth ofSaccharomyces cerevisiae without causing cell death.FEBS Lett.446, 9–14 (1999).
Xu Z.U., Wickner W.: Thioredoxin is required for vacuole inheritance inS. cerevisiae.J. Cell Biol.132, 787–794 (1996).
Xu C., Zhou T., Kuroda M., Rosen B.P.: Metalloid resistance mechanism in prokaryotes.J. Biochem.123, 16–23 (1998).
Yamano S., Maruyama T.: An azide-insensitive superoxide dismutase from a hyperthermophilic archeon,Sulfobolus solfatarius.J. Biochem.125, 186–193 (1999).
Yang M.-H., Schaich K.M.: Factors affecting DNA damage caused by lipid hydroperoxides and aldehydes.Free Radicals Biol. Med.20, 225–236 (1996).
Yao Y., Yin D., Jas G.S., Kuczera K., Williams T.D., Schöneich H.C., Squier T.C.: Oxidative modification of a carbonyl-teminal vicinal methionine in calmodulin by hydrogen peroxide inhibits calmodulin-dependent activation of the plasma membrane Ca-ATPase.Biochemistry35, 2767–2787 (1996).
Yin Y., Terauchi Y., Solomon G.G., Aizawa S., Rangarian P.N., Yazaki Y., Kadowaki T., Barrett J.C.: Involvement of p85 in p53-dependent apoptotic response to oxidative stress.Nature391, 707–710 (1998).
You H.J., Swanson L., Doetsch P.W.:Saccharomyces cerevisiae possesses two functional homologues ofEscherichia coli endonuclease III.Biochemistry37, 6033–6040 (1998).
Żadziński R., Fortuniak A., Biliński T., Grey M., Bartosz G.: Menadione toxicity inS. cerevisiae cells: activation by conjugation with glutathione.Biochem. Mol. Biol. Internat.44, 747–759 (1998).
Zähringer H., Burgert M., Holzer H., Nwaka S.: Neutral trehalse Nth lp ofS. cerevisiae encoded by theNTHI gene is a multiple stress responsive protein.FEBS Lett.412, 615–620 (1997).
Zha H., Reed J.C.: Heterodimerization—independent functions of cell death regulatory proteins Bax and Bcl-2 in yeast and mammalian cells.J. Biol. Chem.272, 31482–31488 (1997).
Zhang Y., Marcillat O., Giulivi C., Ernster L., Davies K.J.A.: The oxidative inactivation of mitochondrial electron transport chain components.J. Biol. Chem.265, 16330–16336 (1990).
Zhao M.J., Jung L.: Kinetics of the competitive degradation of deoxyribose and other molecules by hydroxyl radicals produced by the Fenton reaction in the presence of assorbic acid.Free Radicals Res.23, 229–243 (1995).
Zheng M., Doan B., Schneider T.D, Storz G.: OxyR and SoxRS regulation of fur.J. Bacteriol.181, 4639–4643 (1999).
Zhulin I.B., Johnson M.S., Taylor B.L.: How do bacteria avoid high oxygen concentrations?Biosci. Rep.17, 335–342 (1997).
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Sigler, K., Chaloupka, J., Brozmanová, J. et al. Oxidative stress in microorganisms—I. Folia Microbiol 44, 587–624 (1999). https://doi.org/10.1007/BF02825650
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DOI: https://doi.org/10.1007/BF02825650