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Anomalous phylogenies based on bacterial catalase gene sequences

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Abstract

Phylogenies based on nine prokaryotic catalase sequences demonstrate no relationship to phylogenies based on rDNA sequences or other known criteria. When this observation is considered together with the monophyletic relationship observed for eukaryotic catalase sequences, it seems likely that the catalase gene sequence has migrated repeatedly from eukaryotes to prokaryotes.

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References

  • Avise JC (1994) Molecular markers, natural history and evolution. Chapman & Hall, New York, pp 352–354

    Google Scholar 

  • Bergey's manual of systematic bacteriology, 8th ed (1989) Williams & Wilkins, Baltimore, pp 31–35

  • Bremer K (1988) The limits of amino acid sequence data in Angiosperm phylogenetic reconstruction. Evolution 42:795–803

    Article  CAS  Google Scholar 

  • Devereaux JR, Haeberli P, Smithies O (1984) A comprehensive set of sequence analysis programs for the VAX. Nucleic Acids Res 12:387–395

    Google Scholar 

  • Donoghue M, Olmstead J, Smith J, Palmer J (1992) Phylogenetic relationships of Dipsacales based on rbcL sequences. Ann Missouri Bot Gard 79:333–345

    Article  Google Scholar 

  • Felsenstein J (1985) Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39:783–791

    Article  Google Scholar 

  • Feng D, Doolittle RF (1987) Progressive sequence alignments as a prerequisite to correct phylogenetic trees. J Mol Evol 25:351–360

    PubMed  CAS  Google Scholar 

  • Loewen PC, Switala J, Triggs-Raine BL (1985a) Catalases HPI and HPII inEscherichia coli are induced independently. Arch Biochem Biophys 243:144–149

    Article  PubMed  CAS  Google Scholar 

  • Loewen PC, Triggs BL, George CS, Hrabarchuk BK (1985b) Genetic mapping ofkatG, a locus that affects synthesis of the bifunctional catalase-peroxidase hydroperoxidase I inEscherichia coli. J Bacteriol 162:661–667

    PubMed  CAS  Google Scholar 

  • Penner-Hahn JE (1995) Structural properties of the manganese site in the manganese catalases. In: Pecoraro VL (ed) Manganese redox enzymes. Verlag Chemie, New York, pp 29–45

    Google Scholar 

  • Schonbaum GR, Chance B (1976) Catalase. In: Boyer PD (ed) The Enzymes, vol XII, pt C, 3rd ed. Academic Press, New York, pp 363–408

    Google Scholar 

  • Shank M, Barynin V, Dismukes GC (1994) Protein coordination to manganese determines the high catalytic rate of dimanganese catalases. Comparison to functional catalase mimics. Biochem 33:15433–15436

    Article  CAS  Google Scholar 

  • Stackebrandt E, Murray RGE, Truper HG (1988)Proteobacteria classis nov., a name for the phylogenetic taxon that includes the “purple bacteria and their relatives.” Int J Syst Bacteriol 38:321–325

    Article  Google Scholar 

  • Swofford D (1993) PAUP: phylogenetic analysis using parsimony, version 3.1 computer program. Illinois Natural History Survey, Champaign

  • Triggs-Raine BL, Doble BW, Mulvey MR, Sorby PA, Loewen PC (1988) Nucleotide sequence ofkatG, encoding catalase HPI ofEscherichia coli. J Bacteriol 170:4415–4419

    PubMed  CAS  Google Scholar 

  • Von Ossowski I, Hausner G, Loewen PC (1993) Molecular evolutionary analysis based on the amino acid sequence of catalase. J Mol Evol 37:71–76

    Article  Google Scholar 

  • Woese CR (1987) Bacterial evolution. Microbiol Rev 51:221–271

    PubMed  CAS  Google Scholar 

Download references

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Mayfield, J.E., Duvall, M.R. Anomalous phylogenies based on bacterial catalase gene sequences. J Mol Evol 42, 469–471 (1996). https://doi.org/10.1007/BF02498641

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  • DOI: https://doi.org/10.1007/BF02498641

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