Skip to main content
Log in

Phylogenetic positions of rust fungi parasitic on ferns: Evidence from 18S rDNA sequence analysis

  • Original Papers
  • Published:
Mycoscience

Abstract

Molecular phylogenetic analyses of fern rusts were carried out based on 18S rDNA sequences. We sequenced the 18S rDNAs of fern rusts (Hyalopsora polypodii andUredinopsis intermedia) and non-fern rusts (Aecidium epimedii, Coleosporium asterum, Ochropsora kraunhiae, Puccinia suzutake andPhysopella ampelopsidis) and analyzed their phylogenetic relationships with other members of the Urediniomycetes. Our bootstrapped neighbor-joining tree obtained from these analyses showed that rust fungi were apparently monophyletic at high confidence level (100% bootstrap confidence). In this molecular phylogenetic tree, the two fern rusts did not occupy the basal position within the rust fungal lineage and did not form a monophyletic lineage. Two species of the Cronartiaceae (Peridermium harknessii, Cronartium ribicola) and one species of the Coleosporiaceae (Coleosporium asterum) grouped with the fern rusts. Therefore, our results suggested that the two fern rusts were not primitive. On the other hand,Mixia osmundae, which is parasitic on the primitive fernOsmunda, was phylogenetically far from the fern rusts.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Similar content being viewed by others

Literature cited

  • Alexopoulos, C. J., Mims, C. W. and Blackwell M. 1996. Introductory mycology, 4th ed. John Wiley and Sons, New York.

    Google Scholar 

  • Ando, K. 1984. Phylogeny of the fern rusts (Uredinopsis, Milesina andHyalopsora). Trans. Mycol. Soc. Japan25: 295–304.

    Google Scholar 

  • Andres, D. A., Seabra, M. C., Brown, M. S., Armstrong, S. A., Smeland, T. E., Cremers, F. P. M. and Goldstein, J. L. 1993. cDNA cloning of component A of rab geranylgeranyl transferase and demonstration of its role as a rab escort protein. Cell73: 1091–1099.

    Article  PubMed  CAS  Google Scholar 

  • Arthur, J. C. 1923. Fern rusts and their aecia. Mycologia15: 245–251.

    Google Scholar 

  • Cummins, G. B. and Hiratsuka, Y. 1983. Illustrated genera of rust fungi, revised ed. The American Phytopathological Society, Minesota.

    Google Scholar 

  • Donk, M. A. 1972. The heterobasidiomycetes: a reconnaissance II. Some problems connected with the restricted emendation. Koninkl. Nederl. Akad. Wetensch.C75: 376–390.

    CAS  Google Scholar 

  • Donk, M. A. 1973. The heterobasidiomycetes: a reconnaissance III. How to recognize a basidiomycete? Koninkl. Nederl. Akad. Wetensch.C76: 1–22.

    Google Scholar 

  • Felsenstein, J. 1985. Confidence limits on phylogenies: An approach using the bootstrap. Evolution39: 783–791.

    Article  Google Scholar 

  • Hart, J. A. 1988. Rust fungi and host plant coevolution: Do primitive hosts harbor primitive parasites? Cladistics4: 339–366.

    Google Scholar 

  • Hawksworth, D. L., Kirk, P. M., Sutton, B. C. and Pegler, D. N. 1995. Ainsworth & Bisby’s dictionary of the fungi, 8th ed. CAB International, Wallingford.

    Google Scholar 

  • Hennen, J. F. and Buritica, P. C. 1980. A brief summary of modern rust taxonomic and evolutionary theory. Rept. Tottori Mycol. Inst. (Japan)18: 243–256.

    Google Scholar 

  • Hiratsuka, Y. and Cummins, G. B. 1963. Morphology of spermogonia of the rust fungi. Mycologia55: 487–507.

    Google Scholar 

  • Hiratsuka, N., Sato, S., Kakishima, M., Kaneko, S., Sato, T., Hiratsuka, T., Katsuya, K., Hiratsuka, Y., Ono, Y., Harada, Y. and Nakayama, K. 1992. The rust flora of Japan. Tsukuba Shuppankai, Ibaraki.

    Google Scholar 

  • Hiratsuka, Y. and Sato, S. 1982. Morphology and taxonomy of rust fungi. In: The rust fungi, (ed. by Scott, K. J. and Chakravorty, A. K.), pp. 1–36. Academic Press, New York.

    Google Scholar 

  • Kimura, M. 1980. A simple method for estimating evolutionary rate of base substitutions through comparative studies of nucleotide sequences. J. Mol. Evol.16: 111–120.

    Article  PubMed  CAS  Google Scholar 

  • Leppik, E. E. 1953. Some view points on the phylogeny of rust fungi. I. Coniferous rusts. Mycologia45: 46–74.

    Google Scholar 

  • Leppik, E. E. 1961. Some view points on the phylogeny of rust fungi. IV. Stem rust geneology. Mycologia53: 378–405.

    Google Scholar 

  • McLaughlin, D. J., Berres, M. E. and Szabo, L. J. 1995. Molecules and morphology in basidiomycete phylogeny. Can. J. Bot.73 (Suppl. 1): S684–S692.

    CAS  Google Scholar 

  • McNabb, R. F. R. 1973. Phragmobasidiomycetidae: Tremellales, Auriculariales, Septobasidiales. In: The fungi, an advanced treatise, vol. IVB, (ed. by Ainsworth, G. S., Sparrow, F. K. and Sussman, A. S.) pp. 303–316. Academic Press, New York.

    Google Scholar 

  • Nishida, H., Ando, K., Ando, Y., Hirata A. and Sugiyama, J. 1995.Mixia osmundae: transfer from the Ascomycota to the Basidiomycota based on evidence from molecules and morphology. Can. J. Bot.73 (Suppl. 1): S660–S666.

    Google Scholar 

  • Petersen, R. H. 1974. The rust fungus life cycle. Bot. Rev.40: 453–513.

    Google Scholar 

  • Saitou, N. and Nei, M. 1987. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol. Biol. Evol.4: 406–425.

    PubMed  CAS  Google Scholar 

  • Savile, D. B. O. 1955. A phylogeny of Basidiomycetes. Can. J. Bot.33: 60–104.

    Google Scholar 

  • Savile, D. B. O. 1968. Possible interrelationships between fungal groups. In: The fungi, an advanced treatise, vol. III, (ed. by Ainsworth, G. C. and Sussman, A. S.), pp. 649–675. Academic Press, New York.

    Google Scholar 

  • Swann, E. C. and Taylor, J. W. 1995a. Phylogenetic perspectives on basidiomycete systematics: evidence from the 18S rRNA gene. Can. J. Bot.73 (Suppl. 1): S862–S868.

    CAS  Google Scholar 

  • Swann, E. C. and Taylor, J. W. 1995b. Phylogenetic diversity of yeast-producing basidiomycetes. Mycol. Res.99: 1205–1210.

    Article  Google Scholar 

  • Thompson, J. D., Higgins, D. G. and Gibson, T. J. 1994. CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, positions-specific gap penalties and weight matrix choice. Nucleic Acids Res.22: 4673–4680.

    PubMed  CAS  Google Scholar 

  • White, T. J., Bruns, T. D., Lee, S. B. and Taylor, J. W. 1990. Amplification and direct sequencing of fungal RNA genes for phylogenetics In: PCR Protocols, (ed. by Innis, M. A., Gelfand, D. H., Sninsky, J. J. and White, T. J.), pp. 315–322. Academic Press, San Diego.

    Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

About this article

Cite this article

Sjamsuridzal, W., Nishida, H., Ogawa, H. et al. Phylogenetic positions of rust fungi parasitic on ferns: Evidence from 18S rDNA sequence analysis. Mycoscience 40, 21–27 (1999). https://doi.org/10.1007/BF02465669

Download citation

  • Accepted:

  • Issue Date:

  • DOI: https://doi.org/10.1007/BF02465669

Key Words

Navigation