Skip to main content
Log in

Polymerization of the cyclic pyrophosphates of nucleosides and their analogues

  • Published:
Journal of Molecular Evolution Aims and scope Submit manuscript

Summary

When 2′-deoxythymidine-3′,5′-cyclic diphosphate, or the cyclic pyrophosphates of the acyclic nucleoside analogues II and IV are heated to 65–85°C in the presence of imidazole, oligomers with lengths up to 20–30 are formed in excellent yield. This reaction provides a useful source of oligomers for use as templates in aqueous condensation reactions. In the absence of evidence to the contrary, we assume that the oligomers are atactic. The potential significance of this reaction in prebiotic chemistry is discussed.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Similar content being viewed by others

Abbreviations

Im:

imidazole

EDAC:

1-ethyl-3(3-dimethylaminopropyl)-carbodiimide hydrochloride

EDTA:

ethylenediaminetetraacetic acid

TEAB:

triethylammonium bicarbonate

poly(C):

polycytidylic acid

poly(U):

polyuridylic acid

A:

adenine

G:

guanine

\(p\mathop A\limits^ = p!\) :

9-[3-hydroxy-2-(hydroxymethyl)prop-1-yl]adenine cyclic diphosphate

\(p\mathop G\limits^ = p!\) :

9-[3-hydroxy-2-(hydroxymethyl)prop-1-yl]guanine cyclic diphosphate

pTp!:

2′-deoxythymidine-3′,5′-cyclic diphosphate

pPrp!:

1,3-propanediol cyclic diphosphate

References

  • Hanes CS, Isherwood FA (1949) Separation of the phosphoric esters on the filter paper chromatogram. Nature 164:1107–1112

    PubMed  Google Scholar 

  • Hartman FC, Barker R (1965) An exploration of the active site of aldolase using structural analogs of fructose diphosphate. Biochemistry 4:1068–1075

    PubMed  Google Scholar 

  • Hill AR Jr, Nord LD, Orgel LE, Robins RK (1988) Cyclization of nucleotide analogues as an obstacle to polymerization. Letter to the editor. J Mol Evol 28:170–171

    PubMed  Google Scholar 

  • Ivin KI, Saegusa T (eds) (1984) Ring-opening polymerization, vol 1 and 2. Elsevier, London

    Google Scholar 

  • Joyce GF, Schwartz AW, Miller SL, Orgel LE (1987) The case for an ancestral genetic system involving simple analogues of the nucleotides. Proc Natl Acad Sci USA 84:4398–4402

    PubMed  Google Scholar 

  • Lohrmann R (1977) Formation of nucleoside 5′-phosphoramidates under potentially prebiological conditions. J Mol Evol 10:137–154

    PubMed  Google Scholar 

  • Renz M, Lohrmann R, Orgel LE (1971) Catalysts for the polymerization of adenosine cyclic 2′, 3′-phosphate on a poly U template. Biochim Biophys Acta 240:463–471

    PubMed  Google Scholar 

  • Tohidi M, Orgel LE (1989) Some acyclic analogues of nucleotides and their template-directed reactions. J Mol Evol 28:367–373

    PubMed  Google Scholar 

  • Visscher J, Schwartz AW (1988) Template-directed synthesis of acyclic oligonucleotide analogues: nucleic acid-like structures IV. J Mol Evol 28:3–6

    PubMed  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Rights and permissions

Reprints and permissions

About this article

Cite this article

Tohidi, M., Orgel, L.E. Polymerization of the cyclic pyrophosphates of nucleosides and their analogues. J Mol Evol 30, 97–103 (1990). https://doi.org/10.1007/BF02099935

Download citation

  • Received:

  • Accepted:

  • Issue Date:

  • DOI: https://doi.org/10.1007/BF02099935

Key words

Navigation