Summary
We recently isolated turnip vein-clearing virus (TVCV), a tobamovirus which causes vein clearing inBrassica rapa (turnip) and a mosaic inNicotiana tabacum (tobacco). We present an electron microscopic and molecular characterization of TVCV. Viral particles from lower epidermis peel contained rod-shaped viral particles, typical of tobamoviruses. Viral RNA extracted from infected turnip leaves was used as template for cDNA synthesis prior to cloning in a plasmid vector. Inserts of selected cDNA clones were sequenced to obtain the nucleotide sequence of the 126 K replicase component. The nucleotide and predicted amino acid sequences were 56 to 59% identical to those of most other sequenced tobamoviruses. The least related sequence, that of cucumber green mottle mosaic virus, was more related to the TVCV lineage than it was to those of the other sequenced tobamoviruses. UV spectroscopy suggested a tryptophan content characteristic of the ribgrass mosaic virus (RMV) group. Fragmentation of the TVCV coat protein by cyanogen bromide treatment produced a profile of fragments indistinguishable from those generated from the coat protein of RMV. Thus, while symptoms of TVCV infection onNicotiana tabacum cv. Samsun andNicotiana clevelandii differ from those reported for RMV, TVCV appears to be closely related to RMV.
Similar content being viewed by others
References
Felsenstein J (1989) Phylogeny inference package. Cladistics 5: 164–166
Fraenkel-Conrat H, Singer B (1957) Virus reconstitution II. Combination of protein and nucleic acid from different strains. Biochim Biophys Acta 24: 540–548
Fraile A, Garcia-Arenal F (1990) A classification of the tobamoviruses based on comparisons among their 126 K proteins. J Gen Virol 71: 2223–2228
Funatsu G, Funatsu M (1968) Studies on the amino acid sequence of Holmes rib-grass strain virus protein. Ann Phytopathol Soc Jpn 43: 1–9
Gibbs A (1986) Tobamovirus classification. In: Van Regenmortel MHV, Fraenkel-Conrat H (ed) The plant viruses, vol 2. Plenum Press, New York, pp 167–180
Gorbalenya AE, Koonin EV (1989) Viral proteins containing the purine NTP-binding sequence pattern. Nucleic Acids Res 17: 8413–8440
Hodgman TC (1988) A new superfamily of replicative proteins. Nature 333: 22–23
Jauregui-Adell J, Hindennach I, Wittmann HG (1969) Aminosäurensequenz (1–61) des Proteins des Tabakmosaicvirusstammes Holmes ribgrass. Z Naturforsch 24B: 870–877
Jonard G, Richards KE, Guilley H, Hirth L (1977) Sequence from the assembly nucleation region of TMV RNA. Cell 11: 483–493
Kovachevsky IC (1963) Untersuchungen über das Wegerichmosaik in Bulgarien. Phytopathol Z 49: 127–146
Lane LC (1986) Propagation and purification of RNA plant viruses. Methods Enzymol 118: 687–696
Lartey RT, Hartson SD, Pennington RE, Sherwood JL, Melcher U (1993) Occurrence of a vein-clearing tobamovirus in turnip. Plant Dis 77: 21–24
Melcher U (1990) Similarities between putative transport proteins of plant viruses. J Gen Virol 71: 1009–1018
Melcher U, Lartey RT, Pennington RE (1992) Isolate-specific synergy in symptom production between a caulimo- and a tobamovirus. Phytopathology 82: 1173–1174
Morrissey JH (1981) Silver stain for protein in polyacrylamide gels: a modified procedure with enhanced uniform sensitivity. Anal Biochem 117: 307–310
Oshima N, Goto T, Sato R (1962) A strain (TMV-C) of tobacco mosaic virus pathogenic to crucifer plants. Hokkaido Natl Agr Expt Sta Res B 78: 74–80
Oshima N, Harrison BD (1975) Ribgrass mosaic virus. CMI/AAB Descriptions of Plant Viruses, no. 152
Oshima N, Ohashi Y, Umekawa M (1974) Studies on some strains of tobacco mosaic virus pathogenic to crucifer plants. 2. Host range. Ann Phytopathol Soc Jpn 40: 243–251
Rozanov MN, Koonin EV, Gorbalenya AE (1992) Conservation of the putative methyltransferase domain: a hallmark of the ‘Sindbis-like’ supergroup of positive-strand RNA viruses. J Gen Virol 73: 2129–2134
Sanger F, Nicklen S, Coulson AR (1977) DNA sequencing with chain-terminating inhibitors. Proc Natl Acad Sci USA 74: 5463–5467
Skopp RN, Lane LC (1988) Fingerprinting of proteins cleaved in solution by cyanogen bromide. Appl Theor Electrophor 1: 61–64
Wetter C (1986) Ribgrass mosaic virus. In: van Regenmortel MHV, Fraenkel-Conrat H (ed) The plant viruses, vol 2. Plenum Press, New York, pp 221–232
Wittmann HG, Hinnenbach I, Wittmann-Leibold B (1969) Aminosäurensequenz (positionen 62–156) des Proteins des Tabakmosaikvirusstammes Holmes ribgrass. Z Naturforsch 24B: 877–885
Zimmern D (1977) The nucleotide sequence at the origin for assembly on tobacco mosaic virus RNA. Cell 11: 463–482
Author information
Authors and Affiliations
Rights and permissions
About this article
Cite this article
Lartey, R.T., Lane, L.C. & Melcher, U. Electron microscopic and molecular characterization of turnip vein-clearing virus. Archives of Virology 138, 287–298 (1994). https://doi.org/10.1007/BF01379132
Received:
Accepted:
Issue Date:
DOI: https://doi.org/10.1007/BF01379132