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Identification of a new EF-hand superfamily member fromTrypanosoma brucei

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Summary

We identified several open reading frames between the regions encoding calmodulin and ubiquitin-EP52/1 in the genome ofTrypanosoma brucei. One of these, EFH5, encodes a protein 192 amino acids long. The EFH5 transcript is present in poly(A)+ mRNA and is present at similar levels in the mammalian bloodstream form and the insect procyclic form. EFH5 contains four EF-hand homolog domains, two of which are inferred to bind Ca2+ ions. We expressed EFH5 as a fusion protein inEscherichia coli and demonstrated calcium-binding activity of the fusion protein using the45Ca-overlay technique. The function of EFH5 remains unknown; however, as the fourth EF-hand homolog identified in trypanosomes, it attests to the broad range of functions assumed by calcium functioning as a second messenger. EFH5, which is most closely related to LAV1-2 fromPhysarum, represents a distinct subfamily among the EF-hand-containing proteins.

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References

  • Bernards A, van der Ploeg LHT, Frasch ACC, Borst P (1981) Activation of trypanosome surface glycoprotein genes involves a duplication-transposition leading to an altered 3′ end. Cell 27:497–505

    Google Scholar 

  • Engman DM, Krause K-H, Blumin JH, Kim KS, Kirchhoff LV, Donelson JE (1989) A novel flagellar Ca+2-binding protein in trypanosomes. J Biol Chem 264:18627–18631

    Google Scholar 

  • Feinberg AP, Vogelstein B (1983) A technique for radiolabeling DNA restriction endonuclease fragments to high specific activity. Anal Biochem 132:6–13

    Google Scholar 

  • Fickett JW (1982) Recognition of protein coding regions in DNA sequences. Nucleic Acids Res 10:5303–5318

    Google Scholar 

  • Gbenle GO, Akinrimisi EO (1981) Isolation and partial characterization of a calcium-dependent endoribonuclease ofTrypanosoma brucei cytoplasm. Biochem Int 2:219–228

    Google Scholar 

  • Johnson DA, Gautsch JW, Sportsman JR, Elder JH (1984) Improved technique utilizing non-fat milk for analysis of proteins and nucleic acids transferred to nitrocellulose. Gene Anal Tech 1:3–8

    Google Scholar 

  • Kapler GM, Zhang K, Beverley SM (1990) Nuclease mapping and DNA sequence analysis of transcripts from the dihydrofolate reductase-thymidylate synthase (R) region ofLeishmania major. Nucleic Acids Res 18:6399–6408

    Google Scholar 

  • Koerner TJ, Hill TE, Myers AM, Tzagoloff A (1990) High-expression vectors with multiple cloning sites for construction oftrpE fusion genes: pATH vectors. Methods Enzymol, in press

  • Kozak M (1986) Point mutations define a sequence flanking the AUG initiator codon that modulates translation by eukaryotic ribosomes. Cell 44:283–292

    Google Scholar 

  • Kretsinger RH, Tolbert D, Nakayama S, Pearson W (1991) In: Heizmann C (ed) The EF-hand, homologs and analogs in novel calcium binding proteins. Springer Verlag, in press

  • Laemmli U (1970) Cleavage of structural proteins during the assembly of the head of the bacteriophage T4. Nature 227:680–685

    Google Scholar 

  • Laroche A, Lemieux G, Pallotta D (1989) The nucleotide sequence of a developmentally regulated cDNA fromPhysarum polycephalum. Nucleic Acids Res 17:10502

    Google Scholar 

  • Layden RE, Eisen H (1988) Alternate trans-splicing inTrypanosoma equiperdum: Implications for splice site selection. Mol Cell Biol 8:1352–1360

    Google Scholar 

  • Le Blaneq SM, Swinkels BW, Gibson WC, Borst P (1988) Evidence for gene conversion between the phosphoglycerate kinase genes ofTrypanosoma brucei. J Mol Biol 200:439–447

    Google Scholar 

  • Lee MG-S, Chen J, Ho AWM, D'Alesandro PA, van der Ploeg LHT (1990) A putative flagellar Ca+2-binding protein of the flagellum of trypanosomatid protozoan parasites. Nucleic Acids Res 18:4252

    Google Scholar 

  • Lizardi P, Lerner TJ, Gonzalez A, Nogueira N (1985) Expression inEscherichia coli of a cDNA clone encoding a hypothetical calcium-binding protein fromTrypanosoma cruzi epimastigotes. In: Vaccines 85. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, New York, pp 67–70

    Google Scholar 

  • Maeda N, Smithies O (1986) The evolution of multigene families: Human haptoglobin genes. Annu Rev Genet 20:81–108

    Google Scholar 

  • McLaughlin J (1985) A high affinity Ca+2-dependent ATPase in the surface membrane of the bloodstream stage ofTrypanosoma rhodesiense. Mol Biochem Parasitol 15:189–201

    Google Scholar 

  • Moncrief ND, Goodman M, Kretsinger RH (1990) Evolution of EF-hand calcium-modulated proteins I. Relationships based on amino acid sequences. J Mol Evol 30:522–562

    Google Scholar 

  • Murayama K, Mikawa T, Ebashi S (1984) Detection of calcium binding proteins by45Ca autoradiography on nitrocellulose membrane after sodium dodecyl sulfate gel electrophoresis. J Biochem 95:511–519

    Google Scholar 

  • Murphy WJ, Watkins KP, Agabian N (1986) Identification of a novel Y branch structure as an intermediate in trypanosome mRNA processing: evidence fortrans splicing. Cell 47:517–525

    Google Scholar 

  • Osinga KA, Swinkels BW, Gibson WC, Borst P, Veeneman GH, van Boom JH, Michels PAM, Opperdoes FR (1985) Topogenesis of microbody enzymes: a sequence comparison of the genes for the glycosomal (microbody) and cytosolic phosphoglycerate kinases ofTrypanosoma brucei. EMBO J 4:3811–3817

    Google Scholar 

  • Pearson WR, Lipman DJ (1988) Improved tools for biological sequence comparison. Proc Natl Acad Sci USA 85:2444–2448

    Google Scholar 

  • Persechini A, Kretsinger RH (1988) The central helix of calmodulin functions as a flexible tether. J Biol Chem 263:12175–12178

    Google Scholar 

  • Ruben L (1987) Identification of a developmentally regulated calcium-binding protein inTrypanosoma brucei. J Protozool 34:367–370

    Google Scholar 

  • Ruben L, Egwuagu C, Patton CL (1983) African trypanosomes contain calmodulin which is distinct from host calmodulin. Biochim Biophys Acta 758:104–113

    Google Scholar 

  • Sanger F, Nicklen S, Coulson AR (1977) DNA sequencing with chain-terminating inhibitors. Proc Natl Acad Sci USA 74:5463–5467

    Google Scholar 

  • Smith JL, Levin JR, Agabian N (1989) Molecular characterization of theTrypanosoma brucei RNA polymerase I and III largest subunit genes. J Biol Chem 264:18091–18099

    Google Scholar 

  • Sutton RE, Boothroyd JC (1986) Evidence fortrans splicing in trypanosomes. Cell 47:527–535

    Google Scholar 

  • Tschudi C, Ullu E (1988) Polygene transcripts are precursors to calmodulin mRNAs in trypanosomes. EMBO J 7:455–463

    Google Scholar 

  • Tschudi C, Young AS, Ruben L, Patton CL, Richards FF (1985) Calmodulin genes in trypanosomes are tandemly repeated and produce multiple mRNAs with a common 5′ leader sequence. Proc Natl Acad Sci USA 82:3998–4002

    Google Scholar 

  • van der Ploeg LHT, Giannini SH, Cantor CR (1985) Heat shock genes: Regulatory role for differentiation in parasitic protozoa. Science 228:1443–1446

    Google Scholar 

  • Vijayasarathy S, Ernest I, Itzhaki JE, Sherman D, Mowatt MR, Michels PAM, Clayton CE (1990) The genes encoding fructose bisphosphate aldolase inTrypanosoma brucei are interspersed with unrelated genes. Nucleic Acids Res 18:2967–2975

    Google Scholar 

  • Voorheis HP, Martin BR (1980) “Swell dialysis” demonstrates that adenylate cyclase inTrypanosoma brucei is regulated by calcium ions. Eur J Biochem 113:223–227

    Google Scholar 

  • Wong S, Morales TH, Campbell DA (1990) Ubiquitin-EP52 fusion protein homologs fromTrypanosoma brucei. Nucleic Acids Res 18:7181

    Google Scholar 

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Communicated by D. Thomas

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Wong, S., Kretsinger, R.H. & Campbell, D.A. Identification of a new EF-hand superfamily member fromTrypanosoma brucei . Molec. Gen. Genet. 233, 225–230 (1992). https://doi.org/10.1007/BF00587583

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  • DOI: https://doi.org/10.1007/BF00587583

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