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Mithramycin and DIPI: A pair of fluorochromes specific for GC- and AT-rich DNA respectively

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Summary

The AT specificity of the fluorochromes DIPI and DAPI and the GC specificity of mithramycin are evidenced by observations in human, mouse, and bovine chromosomes. DIPI and DAPI produce a pattern similar to Hoechst 33258 in all three species, whereas mithramycin results in a reverse pattern. The AT-rich centromeric heterochromatin in mouse is brilliantly stained by DIPI or DAPI and remains nearly invisible after mithramycin staining. In the GC-rich centromeric heterochromatin of cattle the opposite behavior is observed.

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References

  • Behr, W., Honikel, K., Hartmann, G.: Interaction of the RNA polymerase inhibitor chromomycin with DNA. Eur. J. Biochem. 9, 82–92 (1969)

    Google Scholar 

  • Caspersson, T., Zech, L., Johansson, C., Modest, E. J.: Identification of human chromosomes by DNA-binding fluorescent agents. Chromosoma (Berl.) 30, 215–227 (1970)

    Google Scholar 

  • Comings, D. E.: Mechanisms of chromosome banding. VIII. Hoechst 33 258-DNA interaction. Chromosoma (Berl.) 52, 229–243 (1975)

    Google Scholar 

  • Comings, D. E., Kovács, B. W., Avelino, E., Harris, D. C.: Mechanisms of chromosome banding. V. Quinacrine banding. Chromosoma (Berl.) 50, 111–145 (1975)

    Google Scholar 

  • Comings, D. E., Drets, M. E.: Mechanisms of chromosome banding. IX. Are variations in DNA base composition adequate to account for quinacrine, Hoechst 33 258 and daunomycin banding? Chromosoma (Berl.) 56, 199–211 (1976)

    Google Scholar 

  • Dann, O., Bergen, G., Demant, E., Volz, G.: Trypanocide Diamine des 2-Phenyl-benzoforan, 2-Phenyl-inden und 2-Phenyl-indols. Liebigs Ann. Chem. 749, 68–89 (1971)

    Google Scholar 

  • Distèche, C., Bontemps, J.: Chromosome regions containing DNAs of known base composition, specifically evidenced by 2,7-di-t-butyl proflavine. Comparison with the Q-banding and relation to dye-DNA interactions. Chromosoma (Berl.) 47, 263–281 (1974)

    Google Scholar 

  • Distèche, C., Bontemps, J.: Method for the determination of mean densitometric profiles of chromosomes. Chromosoma (Berl.) 54, 39–59 (1976)

    Google Scholar 

  • Dutrillaux, B., Lejeune, J.: Sur une nouvelle technique d'analyse du caryotype humain. C. R. Acad. Sci. (Paris) 272, série D, 2638–2640 (1971)

    Google Scholar 

  • Filipski, J., Thiery, J.-P., Bernardi, G.: An analysis of the bovine genome by Cs2SO4−Ag+ density gradient centrifugation. J. Molec. Biol. 80, 177–197 (1973)

    Google Scholar 

  • Flamm, W. G., Bernheim, N. J., Brubaker, P. E.: Density gradient analysis of newly replicated DNA from synchronized mouse lymphoma cells. Exp. Cell Res. 64, 97–104 (1971)

    Google Scholar 

  • Hilwig, I., Gropp, A.: Staining of constitutive heterochromatin in mammalian chromosomes with a new fluorochrome. Exp. Cell Res. 75, 122–126 (1972)

    Google Scholar 

  • Kurnit, D. M., Shafit, B. R., Maio, J. J.: Multiple satellite deoxyribonucleic acids in the calf and their relation to the sex chromosomes. J. molec. Biol. 81, 273–284 (1973)

    Google Scholar 

  • Lin, C. C., van de Sande, J. H.: Differential fluorescent staining of human chromosomes with daunomycin and adriamycin—the D-bands. Science 190, 61–63 (1975)

    Google Scholar 

  • Miller, O. J., Miller, D. A., Kouri, R. E., Alderdice, P. W., Dev, V. G., Grewal, M. S., Hutton, J. J.: Identification of the mouse karyotype by quinacrine fluorescence, and tentative assignment of seven linkage groups. Proc. Natl. Acad. Sci. (Wash.) 68, 1530–1533 (1971)

    Google Scholar 

  • Schnedl, W.: Analysis of the human karyotype by the recent banding techniques. Archiv Genetik 46, 1–34 (1973)

    Google Scholar 

  • Schnedl, W., Czaker, R.: Centromeric heterochromatin and comparison of G banding in cattle, goat and sheep chromosomes (Bovidae). Cytogenet. Cell Genet. 13, 246–255 (1974)

    Google Scholar 

  • Schnedl, W., Mikelsaar, A.-V., Breitenbach, M., Dann, O.: DIPI and DAPI: Fluorescence banding with only negligible fading. Hum. Genet. 36 (1977)

  • Schreck, R. R., Erlanger, B. F., Miller, O. J.: The use of antinucleoside antibodies to probe the organization of chromosomes denatured by ultraviolet irradiation. Exp. Cell Res. 88, 31–39 (1974)

    Google Scholar 

  • Schweizer, D.: Reverse fluorescent chromosome banding with chromomycin and DAPI. Chromosoma (Berl.) 58, 307–324 (1976a)

    Google Scholar 

  • Schweizer, D.: DAPI fluorescence of plant chromosomes prestained with actinomycin D. Exp. Cell Res. 102, 408–412 (1976b)

    Google Scholar 

  • Schweizer, D.: Giemsa and fluorochrome banding of polytene chromosomes in Phaseolus vulgaris and P. coccineus. In: Current chromosome research, K. Jones, P. E. Brandham, eds., pp. 51–56. Amsterdam: Elsevier/North Holland Biomedical Press 1976c

    Google Scholar 

  • Schweizer, D., Nagl, W.: Heterochromatin diversity in Cymbidium, and its relationship to differential DNA replication. Exp. Cell Res. 98, 411–423 (1976)

    Google Scholar 

  • Slater, M. L.: Rapid nuclear staining method for Saccharomyces cerevisiae. J. Bact. 126, 1339–1341 (1976)

    Google Scholar 

  • Vosa, C. G.: Heterochromatin classification in Vicia faba and Scilla sibirica. Chromosomes today 5, 185–192 (1976)

    Google Scholar 

  • Walker, P. M. B.: How different are the DNAs from related animals? Nature 219, 228–232 (1968)

    Google Scholar 

  • Ward, D. C., Reich, E., Goldberg, I. H.: Base specificity in the interaction of polynucleotides with antibiotic drugs. Science 149, 1259–1263 (1965)

    Google Scholar 

  • Weisblum, B.: Why centric regions of quinacrine treated mouse chromosomes show diminished fluorescence. Nature 246, 150–151 (1973)

    Google Scholar 

  • Weisblum, B., de Haseth, P. L.: Nucleotide specificity of the quinacrine staining reaction for chromosomes. Chromosomes today 4, 35–51 (1973)

    Google Scholar 

  • Weisblum, B., Haenssler, E.: Fluorometric properties of the bibenzimidazole derivative Hoechst 33 258, a fluorescent probe specific for AT concentration in chromosomal DNA. Chromosoma (Berl.) 46, 255–260 (1974)

    Google Scholar 

  • Williamson, D. H., Fennell, D. J.: The use of fluorescent DNA binding agent for detecting and separating yeast mitochondrial DNA. In: Methods in cell biology, Vol. XII, Yeast cells, D. M. Prescott, ed., pp. 335–351. New York-San Francisco-London: Academic Press 1975

    Google Scholar 

  • Yasmineh, W. G., Yunis, J. J.: Satellite DNA in calf heterochromatin. Exp. Cell Res. 64, 41–48 (1971)

    Google Scholar 

  • Zakharov, A. F., Egolina, N. A.: Differential spiralization along mammalian mitotic chromosomes. I. BUdR-revealed differentiation in chinese hamster chromosomes. Chromosoma (Berl.) 38, 341–365 (1972)

    Google Scholar 

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Schnedl, W., Breitenbach, M., Mikelsaar, A.V. et al. Mithramycin and DIPI: A pair of fluorochromes specific for GC- and AT-rich DNA respectively. Hum Genet 36, 299–305 (1977). https://doi.org/10.1007/BF00446280

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  • DOI: https://doi.org/10.1007/BF00446280

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