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Specificity of σ-dependent binding of RNA polymerase to DNA

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Summary

Although a large number of E. coli RNA polymerase molecules can bind to phage T3 DNA, not more than three remain bound per DNA template after addition of poly inosinic acid (poly I) which has a high affinity for the enzyme. These stable complexes are able to initiate RNA chains without lag as the enzyme is resistant against rifampicin if substrate is added simultaneously with the drug. Poly I resistant complexes decay very rapidly in the cold (Fig. 2) and are not formed in the absence of the polymerase σ factor (Table 2). The data provide additional support for the idea that the σ factor effects the binding of the enzymes to specific sites on the DNA template.

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References

  • Bautz, E. K. F., Bautz, F. A.: Initiation of RNA synthesis: The function of σ in the binding of RNA polymerase to promotor sites. Nature (Lond.) 226, 1219–1222 (1969).

    Google Scholar 

  • Bautz, E. K. F., Bautz, F. A., Dunn, J. J.: E. coli sigma factor: A positive control element in phage T4 development. Nature (Lond.) 223, 1022–1024 (1969).

    Google Scholar 

  • Bautz, E. K. F., Dunn, J. J.: DNA-cellulose chromatography of proteins. Proc. in Nucl. Acids Res., G. L. Cantoni and D. R. Davies (eds.) 2, 743–747 (1971).

  • Beck, E.: Isolierung DNase resistenter Komplexe zwischen T7 DNA und E. coli RNA Polymerase. Diplom-Thesis, Heidelberg (1972).

  • Bremer, H., Konrad, M., Bruner, R.: Capacity of T4 DNA to serve as template for purified Escherichia coli RNA polymerase. J. molec. Biol. 16, 104 (1966).

    Google Scholar 

  • Burgess, R. R.: Separation and characterization of the subunits of ribonucleic acid polymerase. J. biol. Chem. 244, 6168–6176 (1969).

    Google Scholar 

  • Burgess, R. R., Travers, A. A., Dunn, J. J., Bautz, E. K. F.: Factor stimulating transcription by RNA polymerase. Nature (Lond.) 221, 43–46 (1969).

    Google Scholar 

  • Chamberlin, M.: Transcription 1970: A summary. Cold Spr. Harb. Symp. quant. Biol. 35, 851–873 (1970).

    Google Scholar 

  • Chessin, H., Summers, W. C.: Initiation by RNA polymerase on UV or X-ray damaged T7 DNA. Biochem. biophys. Res. Commun. 38, 40–45 (1969).

    Google Scholar 

  • Heyden, B., Nüsslein, C., Schaller, H.: RNA polymerase binding sites from the replication form of bacteriophage fd. Nature (Lond.) in press (1972).

  • Hirschbein, L., Dubert, J. M., Babinet, C.: Affinité différentielle de la RNA polymérase pour divers polyribonucléotides synthétiques. Europ. J. Biochem. 1, 135–140 (1967).

    Google Scholar 

  • Jones, O. W., Berg, P.: Studies on the binding of RNA polymerase to polynucleotides. J. molec. Biol. 22, 199–209 (1966).

    Google Scholar 

  • Le Talaer, J. Y., Jeanteur, Ph.: Purification and base composition of phage lambda early promoters. Proc. nat. Acad. Sci. (Wash.) 68, 3211–3215 (1971).

    Google Scholar 

  • Matsukage, A., Murakami, S., Kameyama, T.: The isolation and the characterization of DNA region bound to Escherichia coli RNA polymerase. Biochim. biophys. Acta (Amst.) 179, 145 (1969)

    Google Scholar 

  • Mueller, K.: The function of the σ-factor of Escherichia coli RNA polymerase in template site selection. Mol. gen. Genet. 111, 273–296 (1971).

    Google Scholar 

  • Rüger, W.: Transcription of RNA polymerase binding sites isolated from T4 phage DNA. Biochim. biophys. Acta (Amst.) 238, 202–211 (1971).

    Google Scholar 

  • Sentenac, A., Ruet, A., Fromageot, P.: Excision de la région du DNA liée à la RNA polymérase in vivo. FEBS Letters 2, 53–56 (1968).

    Google Scholar 

  • Sippel, A. E., Hartmann, G. R.: Rifamipicin resistance of RNA polymerase in the binary complex with DNA. Europ. J. Biochem. 16, 152–157 (1970).

    Google Scholar 

  • Travers, A. A., Burgess, R. R.: Cyclic re-use of the RNA polymerase sigma factor. Nature (Lond.) 222, 537–540 (1969).

    Google Scholar 

  • Zillig, W., Fuchs, E., Palm, P., Rabussay, D., Zechel, K.: On the different subunits of DNA-dependent RNA polymerase from E. coli and their role in the complex function of the enzyme. In: L. Silvestri, ed., Lepetit Colloq. on RNA Polymerase and Transcription, p. 151. Amsterdam: North Holl. Publ. Co. 1970.

    Google Scholar 

  • Zillig, W., Zechel, K., Rabussay, D., Schachner, M., Sethi, V. S., Palm, P., Heil, A., Seifert, W.: On the role of different subunits of DNA-dependent RNA polymerase from E. coli in the transcription process. Cold Spr. Harb. Symp. quant. Biol. 35, 47–58 (1970).

    Google Scholar 

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Communicated by H. G. Wittmann

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Bautz, E.K.F., Bautz, F.A. & Beck, E. Specificity of σ-dependent binding of RNA polymerase to DNA. Molec. gen. Genet. 118, 199–207 (1972). https://doi.org/10.1007/BF00333456

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  • DOI: https://doi.org/10.1007/BF00333456

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