Skip to main content
Log in

Isolation and mapping of the rRNA genes in the macronucleus of Oxytricha fallax

  • Published:
Chromosoma Aims and scope Submit manuscript

Abstract

The DNA in the macronucleus of the protozoan Oxytricha, unlike like that of typical eukaryotes, exists as short, gene-sized molecules. Within the macronucleus the rRNA genes are contained in molecules 7,380 nucleotide pairs in length. This rDNA has been substanially purified by selective denaturation of non-ribosomal DNA followed by Sl nuclease digestion. Results from restriction nuclease digestion and rRNA:DNA hybridization show that the rDNA is a linear, non-palindromic molecule which contains one gene each for the 19s and 25s rRNAs. A total of less than 600 base pairs of DNA lies between the 19s and 25s genes or at the 3′ end of the 25s gene. The non-coding portion of the ribosomal DNA is almost entirely limited to an approximately 1,400 base pair region at the 5′ end of the molecule.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Similar content being viewed by others

References

  • Botchan, P., Reeder, R.H., Dawid, I.B.: Restriction analysis of the non-transcribed spacers of Xenopus laevis ribosomal DNA. Cell 11, 599–607 (1977)

    Google Scholar 

  • Cockburn, A.F., Taylor, W.C., Firtel, R.A.: Dictyostelium rDNA consists of non-chromosomal palindromic dimers containing 5s and 36s coding regions. Chromosoma (Berl.) 70, 19–29 (1978)

    Google Scholar 

  • Engberg, J., Andersson, P., Leick, V., Collins, J.: Free ribosomal DNA molecules from Tetrahymena pyriformis GL are giant palindromes. J. molec. Biol. 104, 455–470 (1976)

    Google Scholar 

  • Findly, R.C., Gall, J.G.: Free ribosomal RNA genes in Paramecium are tandemly repeated. Proc. nat. Acad. Sci. (Wash.) 75, 3312–3316 (1978)

    Google Scholar 

  • Gall, J.G., Rochaix, J.-D.: The amplified ribosomal DNA of dytiscid beetles. Proc. nat. Acad. Sci. (Wash.) 71, 1819–1823 (1974)

    Google Scholar 

  • Grainger, R.M., Ogle, R.C.: Chromatin structure of the ribosomal RNA genes in Physarum polycephalum. Chromosoma (Berl) 65, 115–126 (1978)

    Google Scholar 

  • Hourcade, D., Dressler, D., Wolfson, J.: The nucleolus and the rolling circle. Cold Spr. Harb. Symp. quant. Biol. 38, 537–550 (1974)

    Google Scholar 

  • Herrick, G.A., Wesley, R.D.: Isolation and characterization of a highly repetitious inverted terminal repeat sequence from Oxytricha macronuclear DNA. Proc. nat. Acad. Sci. (Wash.) 75, 2626–2630 (1978)

    Google Scholar 

  • Karrer, K.M., Gall, J.G.: The macronuclear ribosomal DNA of Tetrahymena pyriformis is a palindrome. J. molec. Biol. 104, 421–453 (1976)

    Google Scholar 

  • Korn, L.J., Brown, D.D.: Nucleotide sequence of Xenopus borealis oocyte 5s DNA: comparison of sequences that flank several related eukaryotic genes. Cell 15, 1145–1156 (1978)

    Google Scholar 

  • Lauth, M.R., Spear, B.B., Heumann, J., Prescott, D.M.: DNA of ciliated protozoa V. DNA sequence diminution during macronuclear development of Oxytricha. Cell 7, 67–74 (1976)

    Google Scholar 

  • Lawn, R.M.: Gene-sized DNA molecules of the Oxytricha macronucleus have the same terminal sequence. Proc. nat. Acad. Sci. (Wash.) 74, 4325–4328 (1977)

    Google Scholar 

  • Miller, O.L.: Structure and composition of peripheral nucleoli of salamander oocytes. Nat. Cancer Inst. Monogr. 23, 53–66 (1966)

    Google Scholar 

  • Murti, K.G., Prescott, D.M.: Chromosome structure in ciliated protozoans. Cold Spr. Harb. Symp. quant. Biol. 38, 609–618 (1974)

    Google Scholar 

  • Rae, P.M.M., Spear, B.B.: Macronuclear DNA of the hypotrichous ciliate Oxytricha fallax. Proc. nat. Acad. Sci. (Wash.) 75, 4992–4996 (1978)

    Google Scholar 

  • Reeder, R.H., Higashinakagawa, T., Miller, O.L.: The 5′→3′ polarity of the Xenopus ribosomal RNA precursor molecule. Cell 8, 449–454 (1976)

    Google Scholar 

  • Southern, E.M.: Detection of specific sequences among DNA fragments separated by gel electrophoresis. J. molec. Biol. 98, 503–517 (1975)

    Google Scholar 

  • Swanton, M.T., Greslin, A.F., Prescott, D.M.: Arrangement of coding and non-coding sequences in the DNA molecule that codes for ribosomal RNA in Oxytricha sp. Chromosoma (Berl.) 77, 203–215 (1980)

    Google Scholar 

  • Truett, M.A., Gall, J.G.: The replication of ribosomal DNA in the macronucleus of Tetrahymena. Chromosoma (Berl.) 64, 295–303 (1977)

    Google Scholar 

  • Vogt, V.M., Braun, R.: Structure of ribosomal DNA in Physarum polycephalum. J. molec. Biol. 106, 567–587 (1976)

    Google Scholar 

  • Wesley, R.D.: Inverted repetitious sequences in the macronuclear DNA of hypotrichous ciliate. Proc. nat. Acad. Sci. (Wash.) 72, 678–682 (1975)

    Google Scholar 

  • White, R.L., Hogness, D.S.: R loop mapping of the 18s and 28s sequences in long and short repeating units of Drosophila melanogaster rDNA. Cell 10, 117–192 (1977)

    Google Scholar 

  • Wild, M.A., Gall, J.G.: An intervening sequence in the gene coding for 25s ribosomal RNA of Tetrahymena. J. Cell Biol. 79, 144a (1978)

  • Yao, M.-C., Gall, J.G.: A single integrated gene for ribosomal RNA in a eukaryote, Tetrahymena pyriformis. Cell 12, 121–132 (1977)

    Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Rights and permissions

Reprints and permissions

About this article

Cite this article

Spear, B.B. Isolation and mapping of the rRNA genes in the macronucleus of Oxytricha fallax . Chromosoma 77, 193–202 (1980). https://doi.org/10.1007/BF00329544

Download citation

  • Received:

  • Issue Date:

  • DOI: https://doi.org/10.1007/BF00329544

Keywords

Navigation