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Six chloroplast genes (ndhA-F) homologous to human mitochondrial genes encoding components of the respiratory chain NADH dehydrogenase are actively expressed: Determination of the splice sites in ndhA and ndhB pre-mRNAs

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Summary

Sequences (ndhA-F) homologous to human mitochondrial genes for components of the respiratory chain NADH dehydrogenase have been found in the chloroplast DnA of tobacco. The ndhA, D, E and F sequences corresponding to the mitochondrial URF1, 4, 4L and 5 are located in the small single copy region, the ndhB sequence corresponding to URF2 in the inverted repeat and the ndhC sequence corresponding to URF3 in the large single copy region of the chloroplast DNA. Northern blot hybridization revealed that all six ndh sequences are actively expressed in the chloroplasts. The ndhA and ndhB sequences contain single introns and the splice sites of their pre-mRNAs were determined by reverse transcription analysis. These findings suggest that potential components of an NADH dehydrogenase are synthesized in the chloroplasts.

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References

  • Anderson S, Bankier AT, Barrell BG, de Bruijn MHL, Coulson AR, Drouin J, Eperon IC, Nierlich DP, Roe BA, Sanger F, Schreier PH, Smith AJH, Staden R, Young IG (1981) Sequence and organization of the human mitochondrial genome. Nature 290:457–465

    Google Scholar 

  • Bennoun P (1982) Evidence for a respiratory chain in the chloroplast. Proc Natl Acad Sci USA 79:4352–4356

    Google Scholar 

  • Boer PH Gray MW (1986) The URF5 gene of Chlamydomonas reinhardtii mitochondria: DNA sequence and mode of transcription. EMBO J 5:21–28

    Google Scholar 

  • Chomyn A, Mariottini P, Cleeter MWJ, Ragan, CI, Matsuno-Yagi A, Hatefi Y, Doolittle RF, Attardi G (1985) Six unidentified reading frames of human mitochondrial DNA encode components of the respiratory-chain NADH dehydrogenase. Nature 314:592–597

    Google Scholar 

  • Chomyn A, Cleeter MWJ, Ragan CI, Riley M, Doolittle RF, Attardi G (1986) URF6, last unidentified reading frame of human mtDNA, codes for an NADH dehydrogenase subunit. Science 234:614–618

    Google Scholar 

  • Dietrich G, Link G (1985) Transcriptional organization and possible function of mustard plastid DNA regions expressed in vivo. Curr Genet 9:683–692

    Google Scholar 

  • Godde D (1982) Evidence for a membrane bound NADH-plastoquinone-oxidoreductase in Chlamydomonas reinhardii CW-15. Arch Microbiol 131:197–202

    Google Scholar 

  • Kato A, Takaiwa F, Shinozaki K, Sugiura M (1985) Location and nucleotide sequence of the genes for tobacco chloroplast tRNAArg(ACG) and tRNALeu(UAG). Curr Genet 9:405–409

    Google Scholar 

  • Meng BY, Matsubayashi T, Wakasugi T, Shinozaki K, Sugiura M, Hirai A, Mikami T, Kishima Y, Kinoshita T (1986) Ubiquity of the genes for components of a NADH dehydrogenase in higher plant chloroplast genomes. Plant Sci 47:181–184

    Google Scholar 

  • Ohme M, Kamogashira T, Shinozaki K, Sugiura M (1985), Structure and cotranscription of tobacco chloroplast genes for tRNAGlu(UUC), tRNATyr(GUA) and tRNAAsp(GUC). Nucleic Acids Res 13:1045–1056

    Google Scholar 

  • Ohyama K, Fukuzawa H, Kohchi T, Shirai H, Sano T, Sano S, Umesono K, Shiki Y, Takeuchi M, Chang Z, Aota S, Inokuchi H, Ozeki H (1986) Chloroplast gene organization deduced from complete sequence of liverwort Marchantia polymorpha chloroplast DNA. Nature 322:572–574

    Google Scholar 

  • Palmer JD (1985) Comparative organization of chloroplast genomes. Annu Rev Genet 19:325–354

    Google Scholar 

  • Pratje E, Schnierer S, Dujon B (1984) Mitochondrial DNA of Chlamydomonas reinhardtii: the DNA sequence of a region showing homology with mammalian URF2. Curr Genet 9:75–82

    Google Scholar 

  • Sanger F, Nicklen S, Coulson AR (1977) DNA sequencing with chain-terminating inhibitors. Proc Natl Acad Sci USA 74:5463–5467

    Google Scholar 

  • Shinozaki K, Sugiura M (1982) Sequence of intercistronic region between the ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit and the coupling factor β subunit gene. Nucleic Acids Res 10:4923–4934

    Google Scholar 

  • Shinozaki K, Deno H, Sugita M, Kuramitsu S, Sugiura M (1986a) Intron in the gene for the ribosomal protein S16 of tobacco chloroplast and its conserved boundary sequences. Mol Gen Genet 202:1–5

    Google Scholar 

  • Shinozaki K, Ohme M Tanaka M, Wakasugi T, Hayashida N, Matsubayashi T, Zaita N, Chunwongse J, Obokata J, Yamaguchi-Shinozaki K, Ohto C, Torazawa K, Meng BY, Sugita M, Deno H, Kamogashira T, Yamada K, Kusuda J, Takaiwa F, Kato A, Tohdoh N, Shimada H, Sugiura M (1986b) The complete nucleotide sequence of the tobacco chloroplast genome: its gene organization and expression. EMBO J 5:2043–2049

    Google Scholar 

  • Shinozaki K, Ohme M, Tanaka M, Wakasugi T, Hayashida N, Matsubayashi K, Zaita N, Chunwongse J, Obokata J, Yamaguchi-Shinozaki K, Ohto C, Torazawa K, Meng BY, Sugita M, Deno H, Kamogashira T, Yamada K, Kusuda J, Takaiwa P, Kato A, Tohdoh N, Shimada H, Sugiura M (1986c) The complete nucleotide sequence of the tobacco chloroplast genome. Plant Mol Biol Rep 4:110–147

    Google Scholar 

  • Stern DB, Palmer JD (1984) Extensive and widespread homologies between mitochondrial DNA and chloroplast DNA in plants. Proc Natl Acad Sci USA 81:1946–1950

    Google Scholar 

  • Stern DB, Bang AG, Thompson WF (1986) The watermelon mitochondrial URF-1 gene: evidence for a complex structure. Curr Genet 10:857–869

    Google Scholar 

  • Sugiura M, Shinozaki K, Zaita N, Kusuda M, Kumano M (1986) Clone bank of the tobacco (Nicotiana tabacum) chloroplast genome as a set of overlapping restriction endonuclease fragments: Mapping of eleven ribosomal protein genes. Plant Sci 44:211–216

    Google Scholar 

  • Tanaka M, Obokata J, Chunwongse J, Shinozaki K, Sugiura M (1987) Rapid splicing and stepwise processing of a transcript from the psbB operon in tobacco chloroplast: Determination of the intron sites in petB and petD. Mol Gen Genet 209:427–431

    Google Scholar 

  • Wilbur WJ, Lipman DJ (1983) Rapid similarity searches of nucleic acid and protein data banks. Proc Natl Acad Sci USA 80:726–730

    Google Scholar 

  • Yanisch-Perron C, Vieira J, Messing J (1985) Improved M13 phage cloning vectors and host strains: nucleotide sequences of the M13mp18 and pUC19 vectors. Gene 33:103–119

    Google Scholar 

  • Vahrenholz C, Pratje E, Michaelis G, Dujon B (1985) Mitochondrial DNA of Chlamydomonas reinhardtii: sequence and arrangement of URF5 and the gene for cytochrome oxidase subunit I. Mol Gen Genet 201:213–224

    Google Scholar 

  • Zaita N, Torazawa K, Shinozaki K, Sugiura M (1987) Trans splicing in vivo: joining of transcripts from the ‘divided’ gene for ribosomal protein S12 in the chloroplasts of tobacco. FEBS Lett 210:153–156

    Google Scholar 

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Communicated by R.G. Herrmann

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Matsubayashi, T., Wakasugi, T., Shinozaki, K. et al. Six chloroplast genes (ndhA-F) homologous to human mitochondrial genes encoding components of the respiratory chain NADH dehydrogenase are actively expressed: Determination of the splice sites in ndhA and ndhB pre-mRNAs. Mol Gen Genet 210, 385–393 (1987). https://doi.org/10.1007/BF00327187

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  • DOI: https://doi.org/10.1007/BF00327187

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