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A novel transposon-like structure carries the genes for pyocin AP41, a Pseudomonas aeruginosa bacteriocin with a DNase domain homology to E2 group colicins

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Summary

The genetic determinant for pyocin AP41, a bacteriocin produced by Pseudomonas aeruginosa, has been cloned. The determinant is located on the chromosome flanked by a pair of inverted repeats, forming a transposon-like structure (TnAP41). TnAP41 possesses some features characteristic of the Tn3 family of transposons. Based on a comparison with the structure of the corresponding region of the chromosome of a nonproducer strain, we propose that P. aeruginosa has acquired pyocinogeny by the transposition of TnAP41 into the chromosome. The determinant comprises two ORFs encoding the protein subunits responsible for the killing action (the large component) and immunity (the small component). Amino acid sequences of the C-terminus of the large component (the deoxyribonuclease domain) and the immunity protein show remarkable homology to those of E2 group colicins, suggesting that these bacteriocins, which are produced by distantly related species, have originated from a common ancestor.

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References

  • Berg DE, Howe MM (1989) Mobile DNA. American Society for Microbiology, Washington DC

    Google Scholar 

  • Chak K-F, Kuo W-S, Lu F-M, James R (1991) Cloning and characterization of the ColE7 plasmid. J Gen Microbiol 137:91–100

    Google Scholar 

  • Chou PY, Fassman GD (1974) Prediction of protein conformation. Biochemistry 13:222–245

    Google Scholar 

  • Cole ST, Saint-Joanis B, Pugsley AP (1985) Molecular characterisation of the colicin E2 operon and identification of its products. Mol Gen Genet 198:465–472

    Google Scholar 

  • Cooper PC, James R (1984) Two new E colicins, E8 and E9, produced by a strain of Escherichia coli. J Gen Microbiol 130:209–215

    Google Scholar 

  • Crawford IP, Eberly L (1986) Structure and regulation of the anthranilate synthase genes in Pseudomonas aeruginosa: I. Sequence of trpG encoding the glutamine amidotransferase subunit. Mol Biol Evol 3:436–448

    Google Scholar 

  • Eaton T, James R (1989) Complete nucleotide sequence of the colicin E9 (cei) gene. Nucleic Acid Res 17:1761–1761

    Google Scholar 

  • Farmer JJ, Herman LG (1969) Epidemiological fingerprinting of Pseudomonas aeruginosa by the production of and sensitivity to pyocin and bacteriophage. Appl Microbiol18:760–765

    Google Scholar 

  • Govan JRW (1978) Pyocin typing of Pseudomonas aeruginosa. Methods Microbiol 10:61–91

    Google Scholar 

  • Grinsted J, Brown NL (1984) A Tn21 terminal sequence within Tn501: complementation of tnpA gene function and transposon evolution. Mol Gen Genet 197:497–502

    Google Scholar 

  • Grinsted J, de la Cruz F, Altenbuchner J, Schmitt R (1982) Complementation of transposition of tnpA mutants of Tn3, Tn21, Tn501, and Tn1721. Plasmid 8:276–286

    Google Scholar 

  • Hardy KG (1975) Colicinogeny and related phenomena. Bacteriol Rev 39:464–515

    Google Scholar 

  • Heffron F (1983) Tn3 and its relatives. In: Shapiro JA (ed) Mobile genetic elements. Academic Press, New York, pp 223–260

    Google Scholar 

  • Holloway BW, Rossiter H, Burgess D, Dodge J (1973) Aeruginocin-tolerant mutants of Pseudomonas aeruginosa. Genet Res 22:239–253

    Google Scholar 

  • Hoshino T, Kose-Terai K, Uratani Y (1991) Isolation of the braZ gene encoding the carrier for a novel branched-chain amino acid transport system in Pseudomonas aeruginosa PAO. J Bacteriol 173:1855–1861

    Google Scholar 

  • Hu ST, Lee CH (1988) Characterization of the transposon carrying the STII gene of enterotoxigenic Escherichia coli. Mol Gen Genet 214:490–495

    Google Scholar 

  • James R, Jarvis M, Barker DF (1987) Nucleotide sequence of the immunity and lysis region of the ColE9-J plasmid. J Gen Microbiol 133:1553–1562

    Google Scholar 

  • Kageyama M (1975) Bacteriocins and bacteriophages in Pseudomonas aeruginosa. In: Mitsuhashi S, Hashimoto H (eds) Microbial drug resistance. University of Tokyo Press, Tokyo, pp 291–305

    Google Scholar 

  • Kleckner N (1981) Transposable elements in prokaryotes. Annu Rev Genet 15:341–404

    Google Scholar 

  • Lau PCK, Rowsome RW, Zuker M, Visentin LP (1984) Comparative nucleotide sequences encoding the immunity proteins and the carboxy-terminal peptides of colicins E2 and E3. Nucleic Acids Res 12:8733–8745

    Google Scholar 

  • Lau PCK, Condie JA (1989) Nucleotide sequences from the colicin E5, E6, and E9 operons: presence of a degenerate transposon-like structure in the ColE9-J plasmid. Mol Gen Genet 217:269–277

    Google Scholar 

  • Masaki H, Toba M, Ohta T (1985) Structure and expression of the ColE2-P9 immunity gene. Nucleic Acids Res 13:1623–1635

    Google Scholar 

  • Masaki H, Ohta T (1985) Colicin E3 and its immunity genes. J Mol Biol 182:217–227

    Google Scholar 

  • Maxam AM, Gilbert W (1980) Sequencing end-labeled DNA with base-specific chemical cleavages. Methods Enzymol 65:499–560

    Google Scholar 

  • Michiels T, Cornelis G, Ellis K, Grinsted J (1987) Tn2501, a component of the lactose transposon Tn951, is an example of a new category of class II transposable elements. J Bacteriol 169:624–631

    Google Scholar 

  • Normore WM, Brown JR (1970) Guanine plus cytosine (G+C) composition of bacteria. In: Sober HA (ed) Handbook of biochemistry. CRC Press, Cleveland, pp H-60

    Google Scholar 

  • Ohno-Iwashita Y, Imahori K (1980) Assignment of the functional loci in colicin E2 and E3 molecules by the characterization of their proteolytic fragments. Biochemistry 19:652–659

    Google Scholar 

  • Pugsley AP (1985) Escherichia coli K12 strains for use in the identification and characterization of colicins. J Gen Microbiol 131:369–376

    Google Scholar 

  • Sano Y, Kageyama M (1981) Purification and properties of an S-type pyocin, pyocin AP41. J Bacteriol 146:733–739

    Google Scholar 

  • Sano Y, Kageyama M (1984) Genetic determinant of pyocin AP41 as an insert in the Pseudomonas aeruginosa chromosome. J Bacteriol 158:562–570

    Google Scholar 

  • Sano Y, Kageyama M (1987) The sequence and function of the recA gene and its protein in Pseudomonas aeruginosa PAO. Mol Genet 208:412–419

    Google Scholar 

  • Sano Y, Matsui H, Kobayashi M, Kageyama M (1990) Pyocins S1 and S2, bacteriocins of Pseudomonas aeruginosa. In: Silver S, Chakrabarty AM, Iglewski B, Kaplan S (eds) Pseudomonas: Biotransformations pathogenesis and evolving biotechnology. American Society for Microbiology, Washington DC, pp 352–358

    Google Scholar 

  • Shapiro JA (1983) Mobile genetic elements. Academic Press, New York

    Google Scholar 

  • Sherratt D (1989) Tn3-related transposable elements, site-specific recombination and transposition. In: Berg DE, Home MM (eds) Mobile DNA. American Society for Microbiology, Washington DC, pp 163–184

    Google Scholar 

  • Shinomiya T, Shiga S, Kageyama M (1983) Genetic determinant of pyocin R2 in Pseudomonas aeruginosa PAO I. Localization of the pyocin R2 gene cluster between the trpCD and trpE genes. Mol Gen Genet 189:375–381

    Google Scholar 

  • So M, McCarthy BJ (1980) Nucleotide sequence of the bacterial transposon Tn1681 encoding a heat-stable (ST) toxin and its identification in enterotoxigenic Escherichia coli strains. Proc Natl Acad Sci USA 77:4011–4015

    Google Scholar 

  • Soong B-W, Lu F-M, Chak K-F (1992) Characterization of the cea gene of the ColE7 plasmid. Mol Gen Genet 233:177–183

    Google Scholar 

  • Toba M, Masaki H, Ohta T (1988) Colicin E8, a DNase which indicates an evolutionary relationship between colicins E2 and E3. J Bacteriol 170:3237–3242

    Google Scholar 

  • Tsuda M, Iino T (1990) Naphthalene degrading genes on plasmid NAH7 are on a defective transposon. Mol Gen Genet 223:33–39

    Google Scholar 

  • Uchimura T, Lau PCK (1987) Nucleotide sequence from the colicin E8 operon: homology with plasmid ColE2-P9. Mol Gen Genet 209:489–493

    Google Scholar 

  • Vieira J, Messing J (1982) The pUC plasmids, an M13mp7-derived system for insertion mutagenesis and sequencing with synthetic universal primers. Gene 19:259–268

    Google Scholar 

  • Walker GC (1984) Mutagenesis and inducible responses to deoxyribonucleic acid damage in Escherichia coli. Microbiol Rev 48:60–93

    Google Scholar 

  • Yamada M, Ebina Y, Miyata T, Nakazawa T, Nakazawa A (1982) Nucleotide sequence of the structural gene for colicin E1 and predicted structure of the protein. Proc Natl Acad Sci USA 79:2827–2831

    Google Scholar 

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Communicated by K. Isono

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Sano, Y., Kageyama, M. A novel transposon-like structure carries the genes for pyocin AP41, a Pseudomonas aeruginosa bacteriocin with a DNase domain homology to E2 group colicins. Molec. Gen. Genet. 237, 161–170 (1993). https://doi.org/10.1007/BF00282797

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