Skip to main content
Log in

Human esterase D gene: complete cDNA sequence, genomic structure, and application in the genetic diagnosis of human retinoblastoma

  • Original Investigations
  • Published:
Human Genetics Aims and scope Submit manuscript

Summary

The gene encoding human esterase D (EsD), a member of the nonspecific esterase family, is a useful genetic marker for retinoblastoma (RB) and Wilson's disease. Previously we identified a cDNA clone from this gene and determined its chromosomal location. In this report, we present the complete cDNA sequence of the human EsD gene. A long open reading frame encoded a predicted protein of 282 amino acids with molecular weight of 30 kD. A computer-assisted search of a protein sequence data base revealed homology with two other esterases, acetylcholinesterase of Torpedo and esterase-6 of Drosophila. Homologous region were centered around presumptive active sites, suggesting that the catalytic domains of the esterases are conserved during evolution. Three genomic clones of this gene were also isolated and characterized by restriction mapping. At least ten exons were distributed over a 35-kb (kilobase pair) region; each exon contained an average of 100 basepairs (bp). A polymorphic site for Apa I, located within an intron of the esterase D gene, can be used to identify chromosome 13 carrying defective RB alleles within retinoblastoma families.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Similar content being viewed by others

References

  • Bookstein R, Lee EY-HP, To H, Young L-J, Sery TW, Hayes RC, Friedmann T, Lee W-H (1988) Human retinoblastoma susceptibility gene: genomic organization and analysis of heterozygous intragenic deletion mutants. Proc Natl Acad Sci USA 85:2210–2214

    Google Scholar 

  • Coates PM, Mestriner MA, Hopkinson DA (1975) A preliminary genetic interpretation of the esterase isozymes of human tissue. Ann Hum Genet 39:1–20

    Google Scholar 

  • Dayhoff MO (ed) (1972) Atlas of protein sequence and structure, vol 5. National Biomedical Research Foundation, Washington, DC

    Google Scholar 

  • Feinberg AP, Vogelstein B (1983) A technique for radiolabeling DNA restriction endonuclease fragments to high specific activity. Anal Biochem 132:6–13

    Google Scholar 

  • Frydman M, Bonne-Tamir B, Farrer LA, Conneally M, Magazanik A, Ashbel S, Golwitch Z (1985) Assignment of the gene for Wilson disease to chromosome 13: linkage to the esterase D locus. Proc Natl Acad Sci USA 82:1819–1821

    Google Scholar 

  • Hopkinson DA, Mestriner MA, Cortner J, Harris H (1973) Esterase D, a new human polymorphism. Ann Hum Genet 37:119–137

    Google Scholar 

  • Ingolia DE, Al-Ubaidi MR, Young CY, Bigo HA, Wright DA, Kellems RE (1986) Molecular cloning of the murine adenosine deaminase gene from a genetically enriched source: identification and characterization of the promotor region. Mol Cell Biol 6: 4458–4466

    Google Scholar 

  • Lee EY-HP, Lee W-H (1986) Molecular cloning of the human esterase D gene, a genetic marker of retinoblastoma. Proc Natl Acad Sci USA 83:6337–6341

    Google Scholar 

  • Lee W-H, Wheatley W, Benedict WF, Huang C-M, Lee EY-HP (1986) Purification, biochemical characterization, and biological function of human esterase D. Proc Natl Acad Sci USA 83:6790

    Google Scholar 

  • Lee W-H, Bookstein R, Wheatley W, Benedict WF, Lee EY-HP (1987a) A null allele of esterase D is a marker for genetic events in retinoblastoma formation. Hum Genet 76:33–36

    Google Scholar 

  • Lee W-H, Bookstein R, Hong F, Young L-J, Shew J-Y, Lee EY-HP (1987b) Human retinoblastoma susceptibility gene: cloning, identification, and sequence. Science 235:1394–1399

    Google Scholar 

  • Maniatis T, Fritsch EF, Sambrook J (eds) (1982) Molecular cloning: a laboratory manual. Cold Spring Harbor Laboratory, Cold Spring Harbor, NY

    Google Scholar 

  • Mukai S, Rapaport JM, Shields JA, Augsburger JJ, Dryja TP (1984) Linkage of genes for human esterase D and hereditary retinoblastoma. Am J Ophthalmol 97:681–685

    Google Scholar 

  • Oakeshott JG, Collet C, Phillips RW, Nielsen KM, Russell RJ, Chambers GK, Ross V, Richmond RC (1987) Molecular cloning and characterization of exterase-6, a serine hydrolase of Drosophila. Proc Natl Acad Sci USA 84:3359–3363

    Google Scholar 

  • Sanger F, Nicklen S, Coulson AR (1977) DNA sequencing with chain-terminating inhibitors. Proc Natl Acad Sci USA 74:5463–5467

    Google Scholar 

  • Schumacher M, Camp S, Maulet Y, Newton M, Macphee-Quigley K, Taylor SS, Friedman T, Taylor P (1986) Primary structure of Torpedo californica acetylcholinesterase deduced from its cDNA sequence. Nature 319:407–409

    Google Scholar 

  • Sparkes RS, Sparkes ME, Wilson MG, Towner JW, Benedict W, Murphree AL, Yunis JJ (1980) Regional assignment of genes for human esterase D and retinoblastoma to chromosome band 13q14. Science 208:1042–1044

    Google Scholar 

  • Sparkes RS, Murphree AL, Lingua RW, Sparkes ME, Fiebl LL, Funderburk SJ, Benedict WF (1983) Gene for hereditary retinoblastoma assigned to human chromosome 13 by linkage to esterase D. Science 219:971–973

    Google Scholar 

  • Squire J, Dryja TP, Dunn J, Goddard A, Hofman T, Musarella M, Willard HF, Becker AJ, Gallie BL, Phillips RA (1986) Cloning of the esterase D gene: a polymorphic gene probe closely linked to the retinoblastoma locus on chromosome 13. Proc Natl Acad Sci USA 83:6573–6577

    Google Scholar 

  • Vogel F (1979) Genetics of retinoblastoma. Hum Genet 52:1–54

    Google Scholar 

  • Ward P, Packman S, Loughman W, Sparkes ME, Sparkes RS, McMahon A, Gregory T, Ablin A (1984) Location of the retinoblastoma susceptibility gene(s) and the human esterase D locus. J Med Genet 21:92–95

    Google Scholar 

  • Yunis JJ, Ramsey N (1978) Retinoblastoma and subband deletion of chromosome 13. Am J Dis Child 132:161–163

    Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Rights and permissions

Reprints and permissions

About this article

Cite this article

Young, LJ.S., Lee, E.Y.H.P., To, H. et al. Human esterase D gene: complete cDNA sequence, genomic structure, and application in the genetic diagnosis of human retinoblastoma. Hum Genet 79, 137–141 (1988). https://doi.org/10.1007/BF00280552

Download citation

  • Received:

  • Revised:

  • Issue Date:

  • DOI: https://doi.org/10.1007/BF00280552

Keywords

Navigation