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Diffusion approximations of the two-locus Wright-Fisher model

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Abstract

Diffusion approximations are established for the multiallelic, two-locus Wright-Fisher model for mutation, selection, and random genetic drift in a finite, panmictic, monoecious, diploid population. All four combinations of weak or strong selection and tight or loose linkage are treated, though the proof in the case of strong selection and loose linkage is incomplete. Under certain conditions, explicit formulas are obtained for the stationary distributions of the two diffusions with loose linkage.

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References

  • Crow, J. F., Kimura, M.: An introduction to population genetics theory. New York: Harper and Row 1970

    Google Scholar 

  • Ethier, S. N.: Ph.D. Thesis, University of Wisconsin-Madison (1975)

  • Ethier, S. N.: A limit theorem for two-locus diffusion models in population genetics, J. Appl. Probab. 16, 402–408 (1979)

    Google Scholar 

  • Ethier, S. N., Nagylaki, T.: Diffusion approximations of Markov chains with two time scales and applications to population genetics. Adv. Appl. Probab. 12, 14–49 (1980)

    Google Scholar 

  • Ethier, S. N., Nagylaki, T.: Diffusion approximations of Markov chains with two time scales and applications to population genetics, II. Adv. Appl. Probab., in press (1988)

  • Fukushima, M., Stroock D.: Reversibility of solutions to martingale problems. Probability, statistical mechanics, and number theory. Adv. Math. Suppl. Stud. 9, 107–123 (1986)

    Google Scholar 

  • Guess, H. A., Levikson, B. Z.: The transient behavior of highly deleterious, nearly recessive mutant genes in finite populations. Unpublished manuscript (1977)

  • Hill, W. G., Robertson, A.: The effect of linkage on the limits to artificial selection. Genet. Res. 8, 269–294 (1966)

    Google Scholar 

  • Kimura, M.: Stochastic processes and distribution of gene frequencies under natural selection. Cold Spring Harbor Symp. Quant. Biol. 20, 33–53 (1955)

    Google Scholar 

  • Kimura, M.: Diffusion models in population genetics with special reference to fixation time of molecular mutants under mutational pressure. In: Ohta, T., Aoki, K. (eds.) Population genetics and molecular evolution, pp. 19–39. Berlin Heidelberg New York: Springer 1985

    Google Scholar 

  • Kimura, M., King, J. L.: Fixation of a deleterious allele at one of two ‘duplicate’ loci by mutation pressure and random drift. Proc. Natl. Acad. Sci. USA, 76, 2858–2861 (1979)

    Google Scholar 

  • Li, W.-H.: Maintenance of genetic variability under mutation and selection pressures in a finite population. Proc. Natl. Acad. Sci. USA 74, 2509–2513 (1977)

    Google Scholar 

  • Li, W.-H: Rate of silencing at duplicate loci: a theoretical study and interpretation of data from tetraploid fishes. Genetics 95, 237–258 (1980)

    Google Scholar 

  • Littler, R. A.: Ph.D. Thesis, Monash University (1972)

  • Littler, R. A.: Linkage disequilibrium in two locus, finite, random mating models without selection or mutation. Theor. Popul. Biol. 4, 259–275 (1973)

    Google Scholar 

  • Littler, R. A.: The independent loci model as a limit of a two locus model. University of Waikato, Dept. of Mathematics, Research Report No. 41 (1976)

  • Littler, R. A., Good, A. J.: Fixation times and probabilities for an independent loci model in genetics. Theor. Popul. Biol. 14, 204–214 (1978)

    Google Scholar 

  • Nagylaki, T.: Selection in one- and two-locus systems. (Lect. Notes Biomath., vol. 15) Berlin Heidelberg New York: Springer 1977

    Google Scholar 

  • Ohta, T.: Effect of initial linkage disequilibrium and epistasis on fixation probability in a small population, with two segregating loci. Theor. Appl. Genet. 38, 243–248 (1968)

    Google Scholar 

  • Ohta, T., Kimura, M.: Linkage disequilibrium due to random genetic drift. Genet. Res. 13, 47–55 (1969)

    Google Scholar 

  • Ohta, T., Kimura, M.: Linkage disequilibrium between two segregating nucleotide sites under the steady flux of mutations in a finite population. Genetics 68, 571–580 (1971)

    Google Scholar 

  • Sato, K.: Diffusion processes and a class of Markov chains related to population genetics. Osaka J. Math. 13, 631–659 (1976)

    Google Scholar 

  • Shiga, T.: Diffusion processes in population genetics. J. Math. Kyoto Univ. 21, 133–151 (1981)

    Google Scholar 

  • Takahata, N., Maruyama, T.: Polymorphism and loss of duplicate gene expression: A theoretical study with application to tetraploid fish. Proc. Natl. Acad. Sci. USA 76, 4521–4525 (1979)

    Google Scholar 

  • Tier, C, Keller, J. B.: Asymptotic analysis of diffusion equations in population genetics. SIAM J. Appl. Math. 34, 549–576 (1978)

    Google Scholar 

  • Watterson, G. A.: Heterosis or neutrality? Genetics 85, 789–814 (1977)

    Google Scholar 

  • Watterson, G. A.: On the time for gene silencing at duplicate loci. Genetics 105, 745–766 (1983)

    Google Scholar 

  • Wright S.: Adaptation and selection. In: Jepsen, G. L., Simpson, G. G., Mayr, E. (eds.) Genetics, paleontology, and evolution, pp. 365–389. Princeton: Princeton University Press 1949

    Google Scholar 

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Supported in part by NSF Grant DMS-8704369

Supported in part by NSF Grant BSR-8512844

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Ethier, S.N., Nagylaki, T. Diffusion approximations of the two-locus Wright-Fisher model. J. Math. Biology 27, 17–28 (1989). https://doi.org/10.1007/BF00276078

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  • DOI: https://doi.org/10.1007/BF00276078

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