Summary
(Yeast) tRNAPhe was modified by reduction in the dihydrouridine loop (tRNA PheRed ) or by acid treatment in the anticodon loop (tRNA Phe-Y ). The non-ribosomal interaction of the tRNAs with codons was determined by binding complementary oligonucleotides. The transfer activities of the tRNAs were studied in a poly(U) dependent system, using ribosomes from a streptomycin-sensitive E. coli strain (L44) and from two streptomycin-resistant mutants (L44-6 and L44-1), which differed in vivo in their degree of restriction.
On wild type ribosomes, streptomycin inhibits phenylalanine transfer by tRNAPhe and does not affect that by tRNA PheRed . Thus, in presence of streptomycin, the transfer activity of tRNAPhe differs from that of tRNA PheRed , whereas in absence of streptomycin tRNA PheRed transfer activity is as good as tRNAPhe transfer activity. The pattern of streptomycin effects was altered in different ways, if ribosomes were used from streptomycin-resistant strains L44-6 and L44-1, respectively. It is suggested that the ribosomal tRNA screen is more complex than consisting of the codon-anticodon binding site only. Streptomycin affects these binding sites in the different ribosomes to a different degree, giving rise to a partial or complete disturbance of the ribosomal tRNA recognition screen.
Similar content being viewed by others
References
Fittler, F., Hall, R. H.: Selective modification of seryl-tRNA and its effect on the acceptance and binding functions. Biochem. biophys. Res. Commun. 25, 441–446 (1966)
Funatsu, G., Nierhaus, K., Wittmann, H. G.: XXXVII. Determination of allelle types and amino acid exchanges in protein S12 of three streptomycin-resistant mutants of Escherichia coli. Biochim. biophys. Acta (Amst.) 287, 282–291 (1972)
Funatsu, G., Wittmann H. G.: XXXIII. Location of amino-acid replacements in protein S12 isolated from Escherichia coli mutants resistant to streptomycin. J. molec. Biol. 68, 547–550 (1972)
Gefter, M. L., Russell, R. L.: Role of modifications in tyrosine transfer RNA: A modified base affecting ribosome binding. J. molec. Biol. 39, 145–157 (1969)
Ghosh, K., Ghosh, L.: Role of modified nucleosides in transfer ribonucleic acid. Effect of removal of the modified base adjacent to the 3′-end of the anticodon in codon-anticodon interaction. J. biol. Chem. 247, 3369–3375 (1972)
Gorini, L.: The contrasting role of strA and ram gene products in ribosomal functioning. Cold Spr. Harb. Symp. quant. Biol. 34, 101–112 (1969)
Gorini, L.: Ribosomal discrimination of tRNAs. Nature (Lond.) New Biol. 234, 261–264 (1971)
Hirsh, D.: Tryptophan transfer RNA as the UGA suppressor. J. molec. Biol. 58, 439–458 (1971)
Hirsh, D., Gold, L.: Translation of the UGA triplet in vitro by tryptophan transfer RNA's. J. molec. Biol. 58, 459–468 (1971)
Igo-Kemenes, T., Zachau, H. G.: On the specificity of the reduction of transfer ribonucleic acid with sodium borohydride. Europ. J. Biochem. 10, 549–556 (1969)
Modolell, J., Davies, B. D.: Rapid inhibition of polypeptide chain extension by streptomycin. Proc. nat. Acad. Sci. (Wash.) 61, 1279–1286 (1968)
Nierhaus, K. H., Bordasch, K., Homann, H. E.: XLIII. In vivo assembly of Escherichia coli ribosomal proteins. J. molec. Biol. 74, 587–598 (1973)
Nishimura, S.: Minor components in transfer RNS: Their characterization, location and function. Progr. Nucl. Acid Res. Mol. Biol. 12, 50–86 (1972)
Nishimura, S., Harada, F., Narushima, U., Seno, T.: Purification of methionine-, valine-, phenylalanine- and tyrosine-specific tRNA from Escherichia coli. Biochim. biophys. Acta (Amst.) 142, 133–148 (1967)
Pongs, O., Bald, R., Reinwald, E.: On the structure of yeast tRNAPhe. Complementary oligonucleotide binding studies. Europ. J. Biochem. 32, 117–123 (1973)
Pongs, O., Reinwald, E.: Function of Y in codon-anticodon interaction. Biochem. biophys. Res. Commun. 50, 357–364 (1973)
Rosset, R., Gorini, L.: A ribosomal ambiguity mutation. J. molec. Biol. 39, 95–112 (1969)
Söll, D., Raj Bhandary, U. L.: Studies on polynucleotides LXXVI. Specificity of transfer RNA for codon recognition as studied by amino acid incorporation. J. molec. Biol. 29, 113–124 (1967)
Thiebe, R., Zachau, H. G.: A specific modification next to the anticodon of phenylalanine transfer ribonucleic acid. Europ. J. Biochem. 5, 546–555 (1968)
Traub, P., Zillig, W.: Untersuchungen zur Biosynthese der Proteine, VI. Eine neue Methode zur Darstellung eines zellfreine Systems aus Escherichia coli und deren Eigenschaften in der nucleinsäureabhängigen Proteinsynthese. Hoppe-Seylers Z. physiol. Chem. 343, 246–260 (1966)
Author information
Authors and Affiliations
Additional information
Communicated by E. Bautz
Paper No. 90 on “Ribosomal Proteins”. Preceding paper is by Highland et al., J. Mol. Biol., submitted.
Rights and permissions
About this article
Cite this article
Pongs, O., Nierhaus, K.H. Recognition of normal and modified tRNA by streptomycin sensitive and resistant ribosomes of Escherichia coli . Molec. Gen. Genet. 131, 215–222 (1974). https://doi.org/10.1007/BF00267961
Received:
Issue Date:
DOI: https://doi.org/10.1007/BF00267961