Skip to main content
Log in

Recognition of normal and modified tRNA by streptomycin sensitive and resistant ribosomes of Escherichia coli

  • Published:
Molecular and General Genetics MGG Aims and scope Submit manuscript

Summary

(Yeast) tRNAPhe was modified by reduction in the dihydrouridine loop (tRNA PheRed ) or by acid treatment in the anticodon loop (tRNA Phe-Y ). The non-ribosomal interaction of the tRNAs with codons was determined by binding complementary oligonucleotides. The transfer activities of the tRNAs were studied in a poly(U) dependent system, using ribosomes from a streptomycin-sensitive E. coli strain (L44) and from two streptomycin-resistant mutants (L44-6 and L44-1), which differed in vivo in their degree of restriction.

On wild type ribosomes, streptomycin inhibits phenylalanine transfer by tRNAPhe and does not affect that by tRNA PheRed . Thus, in presence of streptomycin, the transfer activity of tRNAPhe differs from that of tRNA PheRed , whereas in absence of streptomycin tRNA PheRed transfer activity is as good as tRNAPhe transfer activity. The pattern of streptomycin effects was altered in different ways, if ribosomes were used from streptomycin-resistant strains L44-6 and L44-1, respectively. It is suggested that the ribosomal tRNA screen is more complex than consisting of the codon-anticodon binding site only. Streptomycin affects these binding sites in the different ribosomes to a different degree, giving rise to a partial or complete disturbance of the ribosomal tRNA recognition screen.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Similar content being viewed by others

References

  • Fittler, F., Hall, R. H.: Selective modification of seryl-tRNA and its effect on the acceptance and binding functions. Biochem. biophys. Res. Commun. 25, 441–446 (1966)

    Google Scholar 

  • Funatsu, G., Nierhaus, K., Wittmann, H. G.: XXXVII. Determination of allelle types and amino acid exchanges in protein S12 of three streptomycin-resistant mutants of Escherichia coli. Biochim. biophys. Acta (Amst.) 287, 282–291 (1972)

    Google Scholar 

  • Funatsu, G., Wittmann H. G.: XXXIII. Location of amino-acid replacements in protein S12 isolated from Escherichia coli mutants resistant to streptomycin. J. molec. Biol. 68, 547–550 (1972)

    Google Scholar 

  • Gefter, M. L., Russell, R. L.: Role of modifications in tyrosine transfer RNA: A modified base affecting ribosome binding. J. molec. Biol. 39, 145–157 (1969)

    Google Scholar 

  • Ghosh, K., Ghosh, L.: Role of modified nucleosides in transfer ribonucleic acid. Effect of removal of the modified base adjacent to the 3′-end of the anticodon in codon-anticodon interaction. J. biol. Chem. 247, 3369–3375 (1972)

    Google Scholar 

  • Gorini, L.: The contrasting role of strA and ram gene products in ribosomal functioning. Cold Spr. Harb. Symp. quant. Biol. 34, 101–112 (1969)

    Google Scholar 

  • Gorini, L.: Ribosomal discrimination of tRNAs. Nature (Lond.) New Biol. 234, 261–264 (1971)

    Google Scholar 

  • Hirsh, D.: Tryptophan transfer RNA as the UGA suppressor. J. molec. Biol. 58, 439–458 (1971)

    Google Scholar 

  • Hirsh, D., Gold, L.: Translation of the UGA triplet in vitro by tryptophan transfer RNA's. J. molec. Biol. 58, 459–468 (1971)

    Google Scholar 

  • Igo-Kemenes, T., Zachau, H. G.: On the specificity of the reduction of transfer ribonucleic acid with sodium borohydride. Europ. J. Biochem. 10, 549–556 (1969)

    Google Scholar 

  • Modolell, J., Davies, B. D.: Rapid inhibition of polypeptide chain extension by streptomycin. Proc. nat. Acad. Sci. (Wash.) 61, 1279–1286 (1968)

    Google Scholar 

  • Nierhaus, K. H., Bordasch, K., Homann, H. E.: XLIII. In vivo assembly of Escherichia coli ribosomal proteins. J. molec. Biol. 74, 587–598 (1973)

    Google Scholar 

  • Nishimura, S.: Minor components in transfer RNS: Their characterization, location and function. Progr. Nucl. Acid Res. Mol. Biol. 12, 50–86 (1972)

    Google Scholar 

  • Nishimura, S., Harada, F., Narushima, U., Seno, T.: Purification of methionine-, valine-, phenylalanine- and tyrosine-specific tRNA from Escherichia coli. Biochim. biophys. Acta (Amst.) 142, 133–148 (1967)

    Google Scholar 

  • Pongs, O., Bald, R., Reinwald, E.: On the structure of yeast tRNAPhe. Complementary oligonucleotide binding studies. Europ. J. Biochem. 32, 117–123 (1973)

    Google Scholar 

  • Pongs, O., Reinwald, E.: Function of Y in codon-anticodon interaction. Biochem. biophys. Res. Commun. 50, 357–364 (1973)

    Google Scholar 

  • Rosset, R., Gorini, L.: A ribosomal ambiguity mutation. J. molec. Biol. 39, 95–112 (1969)

    Google Scholar 

  • Söll, D., Raj Bhandary, U. L.: Studies on polynucleotides LXXVI. Specificity of transfer RNA for codon recognition as studied by amino acid incorporation. J. molec. Biol. 29, 113–124 (1967)

    Google Scholar 

  • Thiebe, R., Zachau, H. G.: A specific modification next to the anticodon of phenylalanine transfer ribonucleic acid. Europ. J. Biochem. 5, 546–555 (1968)

    Google Scholar 

  • Traub, P., Zillig, W.: Untersuchungen zur Biosynthese der Proteine, VI. Eine neue Methode zur Darstellung eines zellfreine Systems aus Escherichia coli und deren Eigenschaften in der nucleinsäureabhängigen Proteinsynthese. Hoppe-Seylers Z. physiol. Chem. 343, 246–260 (1966)

    Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Additional information

Communicated by E. Bautz

Paper No. 90 on “Ribosomal Proteins”. Preceding paper is by Highland et al., J. Mol. Biol., submitted.

Rights and permissions

Reprints and permissions

About this article

Cite this article

Pongs, O., Nierhaus, K.H. Recognition of normal and modified tRNA by streptomycin sensitive and resistant ribosomes of Escherichia coli . Molec. Gen. Genet. 131, 215–222 (1974). https://doi.org/10.1007/BF00267961

Download citation

  • Received:

  • Issue Date:

  • DOI: https://doi.org/10.1007/BF00267961

Keywords

Navigation