Summary
We have examined the sequence dependence of aspartimide formation during Fmoc-based solid-phase synthesis of the peptide Val-Lys-Asp-X-Tyr-Ile. The extent of aspartimide formation and subsequent conversion to the α- or β-piperidide was characterized and quantitated by analytical reversed-phase high-performance liquid chromatography and fast atom bombardment mass spectrometry. Aspartimide formation occurred for X=Arg(Pmc), Asn(Trt), Asp(OtBu), Cys(Acm), Gly, Ser, Thr and Thr(tBu). No single approach was found that could inhibit this side reaction for all sequences. The most effective combinations, in general, for minimization of aspartimide formation were (i) tert-butyl side-chain protection of aspartate, piperidine for removal of the Fmoc group, and either 1-hydroxybenzotriazole or 2,4-dinitrophenol as an additive to the piperidine solution; or (ii) 1-adamantyl side-chain protection of aspartate and 1,8-diazabicyclo[5.4.0]undec-7-ene for removal of the Fmoc group.
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Barany, G. and Merrifield, R.B., In Gross, E. and Meienhofer, J. (Eds.) The Peptides, Vol. 2, Academic Press, New York, NY, 1979, pp. 1–284.
Bodanszky, M. and Martinez, J., In Gross, E. and Meienhofer, J. (Eds.) The Peptides, Vol. 5, Academic Press, New York, NY, 1983, pp. 111–216.
Capasso, S., Mazzarella, L., Sica, F., Zagari, A. and Salvadori, S., J. Chem. Soc., Chem. Commun., (1992) 919.
Okada, Y. and Iguchi, S., J. Chem. Soc., Perkin Trans. I, (1988) 2129.
Tam, J.P., Riemen, M.W. and Merrifield, R.B., Pept. Res., 1 (1986) 6.
Bodanszky, M. and Kwei, J.Z., Int. J. Pept. Protein Res., 12 (1978) 69.
Bodanszky, M., Tolle, J.C., Deshmane, S.S. and Bodanszky, A., Int. J. Pept. Protein Res., 12 (1978) 57.
Martinez, J. and Bodanszky, M., Int. J. Pept. Protein Res., 12 (1978) 277.
Nicolás, E., Pedroso, E. and Giralt, E., Tetrahedron Lett., 30 (1989) 497.
Kitas, E.A., Knorr, R., Trzeciak, A. and Bannwarth, W., Helv. Chim. Acta, 74 (1991) 1314.
Dölling, R., Beyermann, M., Haenel, J., Kernchen, F., Krause, E., Franke, P., Brudel, M. and Bienert, M., J. Chem. Soc., Chem. Commun., (1994) 853.
Otto, H., Kaiser, D., Kempter, C. and Jung, G., In Maia, H.L.S. (Ed.) Peptides 1994 (Proceedings of the 23rd European Peptide Symposium), ESCOM, Leiden, 1995, pp. 246–247.
Yang, Y., Sweeney, W.V., Schneider, K., Thörnqvist, S., Chait, B.T. and Tam, J.P., Tetrahedron Lett., 35 (1994) 9689.
Schön, I., Colombo, R. and Csehi, A., J. Chem. Soc., Chem. Commun., (1983) 505.
Schön, I., Szirtes, T., Rill, A., Balogh, G., Vadász, Z., Seprödi, J., Teplán, I., Chino, N., Kumogaye, K.Y. and Sakakibara, S., J. Chem. Soc., Chem. Commun., (1991) 3213.
Dölling, R., Beyermann, M., Haenel, J., Kernchen, F., Krause, E., Franke, P., Brudel, M. and Bienert, M., In Epton, R. (Ed.) Innovation and Perspectives in Solid Phase Synthesis, Mayflower Worldwide, Birmingham, 1994, pp. 489–492.
Dölling, R., Beyermann, M., Haenel, J., Kernchen, F., Krause, E., Franke, P., Brudel, M. and Bienert, M., In Maia, H.L.S. (Ed.) Peptides 1994 (Proceedings of the 23rd European Peptide Symposium), ESCOM, Leiden, 1995, pp. 244–245.
Iguchi, S., Tsuda, Y. and Okada, Y., Chem. Pharm. Bull., 37 (1989) 2209.
Fields, C.G., Lovdahl, C.M., Miles, A.J., Matthias Hagen, V.L. and Fields, G.B., Biopolymers, 33 (1993) 1695.
Gausepohl, H., Boulin, C., Kraft, M. and Frank, R.W., Pept. Res., 5 (1992) 315.
King, D.S., Fields, C.G. and Fields, G.B., Int. J. Pept. Proteins Res., 36 (1990) 255.
Fields, C.G., Van Drisse, V.L. and Fields, G.B., Pept. Res., 6 (1993) 39.
Quibell, M., Owen, D., Packman, L.C. and Johnson, T., J. Chem. Soc., Chem. Commun., (1994) 2343.
Wade, J.D., Bedford, J., Sheppard, R.C. and Tregear, G.W., Pept. Res., 4 (1991) 194.
Otteson, K.M., Harrison, J.L., Ligutom, A. and Ashcroft, P., In Poster Presentations at the Eleventh American Peptide Symposium, Applied Biosystems, Inc., Foster City, CA, 1989, pp. 34–38.
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Lauer, J.L., Fields, C.G. & Fields, G.B. Sequence dependence of aspartimide formation during 9-fluorenylmethoxycarbonyl solid-phase peptide synthesis. Lett Pept Sci 1, 197–205 (1995). https://doi.org/10.1007/BF00117955
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DOI: https://doi.org/10.1007/BF00117955