Skip to main content
Log in

Extrachromosomal DNA of pea-root (Pisum sativum) has repeated sequences and ribosomal genes

  • Published:
Plant Molecular Biology Aims and scope Submit manuscript

Summary

Restriction endonuclease digestion and Southern blotting procedure were used to determine differences between extrachromosomal, nuclear, plastid, and mitochondrial DNAs from meristematic cells of cultured pea roots.

Extrachromosomal and nuclear DNA are highly methylated and neither DNA is homologous to plastid or mitochondrial DNA. Hybridization of extrachromosomal DNA to nuclear DNA indicated that extrachromosomal DNA differed quantitatively from total nuclear DNA in repetitive sequences. Cloned rDNA showed that extrachromosomal DNA contains rRNA genes but the hybridization signal indicated that the copy number was less than that expected if the molecules were amplified. These and cytological findings suggest that extrachromosomal DNA is involved in or a product of genomic changes associated with the onset of differentiation by precursor cells of vascular parenchyma and the root cap.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Similar content being viewed by others

References

  1. Avanzi S, Maggini F, Innocenti AM: Amplification of ribosomal cistrons during maturation of metaxylem in the root of Allium cepa. Protoplasma 76:197–210, 1973.

    Google Scholar 

  2. Bonen L, HuH' TY, Gray MW: Can partial methylation explain the complex fragment patterns observed when plant mitochondrial DNA is cleaved with restriction endonucleases? FEBS Lett 111:340–346, 1980.

    Google Scholar 

  3. Borek KS, Walbot V: Comparison of the restriction endonuclease digestion patterns of mitochondrial DNA from normal and male sterile cytoplasms of Zea mays L. Genetics 102:109–128, 1982.

    Google Scholar 

  4. Burr B, Burr F: Controlling-element events at the shrunken locus in maize. Genetics 98:143–156, 1981.

    Google Scholar 

  5. Cuellar RE: PhD thesis, Stanford University, Palo Alto, California 1982.

    Google Scholar 

  6. Cullis CA, Davies RD: Ribosomal DNA amounts in Pisum sativum: Genetics 81:485–492, 1975.

    Google Scholar 

  7. Evans LS, Van 't Hof J: Is the nuclear DNA content of mature root cells prescribed in the root meristem? Amer J Bot 61:1101–1111, 1974.

    Google Scholar 

  8. Evans LS, Van 't Hof J: Is polyploidy necessary for tissue differentiation in higher plants? Amer J Bot 62:1060–1064, 1975.

    Google Scholar 

  9. Gatti RA, Concannon P, Salser W: Multiple use of Southern blots. Bio Techniques 2:148–155, 1984.

    Google Scholar 

  10. Gruenbaum Y, Naveh-Many T, Cedar H, Razin A: Sequence specificity of methylation in higher plant DNA. Nature 292:860–862, 1981.

    Google Scholar 

  11. Hirt B: Selective extraction of polyoma DNA from infected mouse cell cultures. J Mol Biol 26:365–369, 1967.

    Google Scholar 

  12. Hummel S, Meyerhof W, Korge E, Knochel W: Characterization of highly and moderately repetitive 500 bp Eco RI fragments from Xenopus laevis DNA. Nuc Acid Res 12:4921–4938, 1984.

    Google Scholar 

  13. Ingle J, Sinclair J: Ribosomal RNA genes and plant development. nature 235:30–32, 1972.

    Google Scholar 

  14. Jorgensen RA, Cuellar RE, Thompson WF: Modes and tempos in the evolution of nuclear—encoded ribosomal pea genes in legumes. Carnegie Inst of Washington Yearbook, 1982, pp 98–101.

  15. Kolodner R, Tewari KK: Physicochemical characterization of mitochondrial DNA from pea leaves. Proc Natl Acad Sci USA 69:1830–1834, 1972.

    Google Scholar 

  16. Kolodner R, Tewari KK: Molecular size and conformation of chloroplast deoxyribonucleic acid from pea leaves. J Biol Chem 247:6355–6364, 1972.

    Google Scholar 

  17. Kolodner R, Tewari KK: Molecular size and conformation of the chloroplast DNA from higher plants. Biochim et Biophys Acta 402:372–390, 1975.

    Google Scholar 

  18. Long EO, Dawid IB: Repeated genes in eukaryotes. Ann. Rev. Biochim. 49:727–764, 1980.

    Google Scholar 

  19. Maniatis T, Fritsch EF, Sambrook, J: Molecular Cloning, A Laboratory Manual. Cold Spring Harbor Laboratory, 1982.

  20. Murray GC, Cuellar RE, Thompson WF: DNA sequence organization in the pea genome. Biochem 17:5781–5790, 1978.

    Google Scholar 

  21. Ruan K-S, Emmons SW: Extrachromosomal copies of transposon Tc1 in the nematode Caenorhabditis elegans. Proc Natl Acad Sci USA 81:4018–4022, 1984.

    Google Scholar 

  22. Scott NS, Kavanagh TA, Timmis YN: Methylation of rRNA genes in some higher plants. Plant Sci News Let 35:213–217, 1984.

    Google Scholar 

  23. Timmis JN, Scott NS: Sequence homology between spinach nuclear and chloroplast genomes. Nature 305:65–67, 1983.

    Google Scholar 

  24. Van 't Hof J: Experimental control of DNA synthesizing and dividing cells in excised root tips of Pisum. Amer J Bot 53:970–976, 1966.

    Google Scholar 

  25. Van 't Hof J: Control of the cell cycle in higher plants. In: Padilla GM, Cameron IL, Zimmerman A (eds) Cell Cycle Controls. Acad Press, New York, 1974, pp 77–85.

    Google Scholar 

  26. Van 't Hof J, Bjerknes CA: Cells of pea (Pisum sativum) that differentiate from G2 phase have extrachromosomal DNA. Mol Cell Biol 2:339–345, 1982.

    Google Scholar 

  27. Van 't Hof J, Bjerknes CA, Delihas NC: Excision and replication of extrachromosomal DNA of pea (Pisum sativum). Mol Cell Biol 3:172–181, 1983.

    Google Scholar 

  28. Van 't Hof J, Bjerknes CA, Lamm SS: Meristematic precursors of vascular parenchyma differentiate from G2 phase after replicating DNA discontinuously. Amer J Bot (in press).

  29. Van 't Hof J, Kuniyuki A, Bjerknes CA: The size and number of replicon families of chromosomal DNA of Arabidopsis thaliana. Chromosoma 68:269–285, 1978.

    Google Scholar 

  30. Varshavsky A: On the possibility of metabolic control of replicon ‘misfiring’: Relationship to emergence of malignant phenotypes in mammalian cell lineages. Proc Natl Acad Sci USA 78:3673–3677, 1981.

    Google Scholar 

  31. Vogt VM, Braun R: Structure of ribosomal DNA in Physarum polycephalum. J Mol Biol 106:567–587, 1976.

    Google Scholar 

  32. Yao M-C: Ribosomal RNA gene amplification in Tetrahymena may be associated with chromosomal breakage and DNA elimination. Cell 24:765–774, 1981.

    Google Scholar 

  33. Zellweger A, Ryser U, Braun R: Ribosomal genes of Physarum: Their isolation and replication in the mitotic cycle. J Mol Biol 64:681–691, 1972.

    Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Rights and permissions

Reprints and permissions

About this article

Cite this article

Kraszewska, E.K., Bjerknes, C.A., Lamm, S.S. et al. Extrachromosomal DNA of pea-root (Pisum sativum) has repeated sequences and ribosomal genes. Plant Mol Biol 5, 353–361 (1985). https://doi.org/10.1007/BF00037556

Download citation

  • Received:

  • Revised:

  • Accepted:

  • Issue Date:

  • DOI: https://doi.org/10.1007/BF00037556

Keywords

Navigation