Abstract
A cDNA previously shown to identify a salt-inducible root-specific transcript in Medicago sativa was used to screen an alfalfa library for the corresponding genomic sequence. One positive clone was recovered. The nucleotide sequence of a subclone contained a 329 bp 5′ region upstream of the first ATG codon, a 1143 bp coding segment, and a 447 bp 3′-untranslated region interrupted by a single 475 bp intron. Translation of the coding segment, which was designated MsPRP2, suggested it encodes a chimeric 40 569 Da cell wall protein with an amino-terminal signal sequence, a repetitive proline-rich sequence, and a cysteine-rich carboxyl-terminal sequence homologous to nonspecific lipid transfer proteins. The 3′-untranslated region of MsPRP2 contained a sequence similar to one found to destabilize mRNAs transcribed from the elicitor-regulated proline-rich protein gene PvPRP1. Transcription run-on experiments using nuclei from salt-sensitive and salt-tolerant alfalfa callus suggested that the accumulation of MsPRP2 transcripts in salt-tolerant alfalfa cells grown in the presence of salt is due primarly to increased mRNA stability. The MsPRP2 gene thus may be a useful model for studying post-transcriptional salt-regulated expression of cell wall proteins.
References
Aguirre P, Smith AG: Molecular characterization of a gene encoding a cysteine-rich protein preferentially expressed in anthers of Lycopersicon esculentum. Plant Mol Biol 23: 477–487 (1993).
Aleith F, Richter G: Gene expression during induction of somatic embryogenesis in carrot cell suspensions. Planta 183: 17–24 (1990).
Bernhard WR, Somervile CR: Coidentity of putative amylase inhibitors from barley and finger millet with phospholipid transfer proteins inferred from amino acid sequence homology. Arch Biochem Biophys 269: 695–697 (1989).
Bray EA: Molecular responses to water deficit. plant Physiol 103: 1035–1040 (1993).
Castonguay Y, Laberge S, Nadeau P, Vezine LP: A cold-induced gene from Medicago sativa encodes a bimodular protein similar to developmentally regulated proteins. Plant Mol Biol 24: 799–804 (1994).
Coupe SA, Taylor JE, Issac PJ, Roberts JA: Identification and characterization of a proline-rich mRNA that accumulates during pod development in oilseep rape (Brassica napus L.). Plant Mol Biol 23: 1223–1232 (1993).
Datta K, Schmidt A, Marcus A: Characterization of two soybean repetitive proline-rich proteins and a cognate cDNA from germinated axes. Plant Cell 1: 945–952 (1989).
Datta N, LaFayette PR, Kroner PA, Nagao RT, Key JL: Isolation and characterization of three families of auxin down-regulated cDNA clones. Plant Mol Biol 21: 859–869 (1993).
Feliciello I, Chinali G: A modified alkaline lysis method for the preparation of highly purified plasmid DNA from Escherichia coli. Anal Biochem 212: 394–401 (1993).
Flores S, Tobin EM: Cytokinin modulation of LHCP mRNA levels: the involvement of post-transcriptional regulation. Plant Mol Biol 11: 409–415 (1988).
Goodall GJ, Filipowicz W: The AU-rich sequences present in the itrons of plant nuclear pre-mRNAs are required for splicing. Cell 58: 473–483 (1989).
Green PJ: Control of mRNA stability in higher plants. Plant Physiol 102: 1065–1070 (1993).
Guiltinan MJ, Marcotte WR, Quatrano RS: A plant leucine zipper protein that recognizes an abscisic acid response element. Science 250: 267–271 (1990).
John I, Wang H, Held BM, Wurtele ES, Colbert JT: An mRNA that specifically accumulates in maize roots delineates a novel subset of developing cortical cells. Plant Mol Biol 20: 821–831 (1992).
Jose-Estanyol M, Ruiz-Avila L, Puigdomenech P: A maize embryo-specific gene encodes a proline-rich and hydrophobic protein. Plant Cell 4: 413–423 (1992).
Joshi CP: An inspection of the domain between putative TATA box and translation start site in 79 plant genes. Nucl Acids Res 15: 6643–6653 (1987).
Kagi JHR, Schaffer A: Biochemistry of metallothionein. Biochemistry 27: 8509–8515 (1988).
Kapros T, Bogre L, Memeth K, Bako L, Gyorgyey J, We SC, Dudits D: Differential expression of histone H3 variants during cell cycle and somatic embryogenesis in alfalfa. Plant Physiol 98: 621–625 (1992).
Keller B, Lamb CJ: Specific expression of a novel cell wall hydroxyproline-rich glycoprotein gene in lateral root initiation. Genes Devel 3: 1639–1646 (1989).
Kieliszewski MJ, Lamport DTA: Extensin: repetitive motifs, functional sites, post-translational codes, and phylogeny. Plant J 5: 157–172 (1994).
Luo M, Hill RD, Mohapatra SS: Role of abcisic acid in plant responses to the environment. In: Greshoff PM (ed) Plant Responses to the Environment, pp. 147–165. CRC Press, Boca Raton, FL (1993).
Mogen BD, Macdonald MH, Leggewie G, Hunt AG: Several distinct types of sequence elements are required for efficient mRNA 3′ end formation in a pea rbcS gene. Mol Cell Biol 12: 5406–5414 (1992).
Odani S, Koide T, Ono T, Seto Y, Tanaka T: Soybean hydrophobic protein: isolation, partial characterization, and the complete primary structure. Eur J Biochem 162: 485–491 (1987).
Padgett RA, Grabowski M, Konarska MM, Seiler S, Sharp PA: Splicing of messenger RNA precursors. Annu Rev Biochem 55: 1119–1150 (1986).
Perlman D, Halvorson HO: A putative signal peptidase recognition site and sequence in eukaryotic and prokaryotic signal peptides. J Mol Biol 167: 391–409 (1983).
Pont-Lezica CF, McNally JG, Pickard BG: Wall-to-membrane linkers in onion epidermis: some hypotheses. Plant Cell Envir 16: 111–123 (1993).
Pyee J, Yu H, Kolattukudy: Identification of a lipid transfer protein as the major protein in the surface wax of broccoli (Brassica oleracea) leaves. Arch Biochem Biophys 311: 460–468 (1994).
Raz R, Jose M, Moya A, Martinez-Izquierdo JA, Puigdomenech P: Different mechanisms generating sequence variability are revealed in distinct regions of the hydroxyproline-rich glycoprotein gene from maize and related species. Mol Gen Genet 233: 252–259 (1992).
Salts Y, Kenigsbuch D, Wachs R, Gruissem W, Barg R: DNA sequence of the tomato fruit expressed proline-rich protein gene TPRP-F1 reveals an intron within the 3′-untranslated transcript. Plant Mol Biol 18: 407–409 (1992).
Showalter AM: Structure and function of plant cell wall proteins. Plant Cell 5: 9–23 (1993).
Subramaniam K, Ranie J, Srinivasa BR, Sinha AM, Mahadevan S: Cloning and sequence of a cDNA encoding a novel hybrid proline-rich protein associated with cytokinin-induced hautoria formation in Cuscuta reflexa. Gene 141: 207–210 (1994).
Suzuki H, Fowler TJ, Tierney ML: Deletion analysis and localization of SBPRP1, a soybean cell wall protein gene, in roots of transgenic tobacco and cowpea. Plant Mol Biol 21: 109–119 (1993).
Takashima K, Watanabe S, Yamada M, Suga T, Mamiya G: Amino acid sequences of two nonspecific lipid-transfer proteins from germinated castor bean. Eur J Biochem 177: 241–249 (1988).
Thoma S, Hecht U, Kippers A, Botella J, DeVries S, Somerville C: Tissue-specific expression of a gene encoding a cell-wall localized lipid transfer protein from Arabidopsis. Plant Physiol 105: 35–45 (1994).
Varner JE, Lin LS: Plant cell wall architecture. Cell 56: 231–239 (1989).
VonHeijne G: Patterns of amino acids near signal-sequence cleavage sites. Eur J Biochem 133: 17–21 (1983).
Wahle E., Keller W: The biochemistry of 3′-end cleavage and polyadenylation of messenger RNA precursors. Annu Rev Biochem 61: 419–440 (1992).
Wessels JGH: Gene expression during fruiting in Schizophyllum commune. Mycol Res 96: 609–620 (1992).
Winicov I: Gene expression in salt tolerant alfalfa cell cultures and the salt tolerant plants regenerated from these cultures. In: Nijkamp HJJ, van derPlas LHW, van Aartrijk (eds) Progress in Plant Cellular and Molecular Biology, pp. 142–147. Kluwer Academic Publishers, Dordrecht (1990).
Winicov I: Gene expression in relation to salt tolerance. In: Basra AS (ed) Stress-Induced Gene Expression in Plants, pp. 61–85. Harwood Academic Publishers, London (1994).
Winicov I, Deutch CE: Characterization of a cDNA clone from salt-tolerant alfalfa cells that identifies salt-inducible root-specific transcripts. J Plant Physiol 144: 222–228 (1994).
Winicov I, Waterborg JH, Harrington RE, McCoy TJ: Messenger RNA induction in cellular salt tolerance of alfalfa (Medicago sativa). Plant Cell Rep 8: 6–12 (1989).
Yamamoto YT, Taylor CG, Acedo GN, Cheng CL, Conkling MA: characterization of cis-acting sequences regulating root-specific gene expression in tobacco. Plant Cell 3: 371–382 (1991).
Zhang S, Mehdy MC: Binding of a 50 kD protein to a U-rich sequence in an mRNA encoding a proline-rich protein that is destabilized by fungal elicitor. Plant Cell 6: 135–145 (1994).
Zhang S, Sheng J, Liu Y, MC: Fungal elicitor-induced bean proline-rich protein mRNA down-regulation is due to destabilization that is transcription and translation dependent. Plant Cell 5: 1089–1099 (1993).
Author information
Authors and Affiliations
Rights and permissions
About this article
Cite this article
Deutch, C.E., Winicov, I. Post-transcriptional regulation of a salt-inducible alfalfa gene encoding a putative chimeric proline-rich cell wall protein. Plant Mol Biol 27, 411–418 (1995). https://doi.org/10.1007/BF00020194
Received:
Accepted:
Issue Date:
DOI: https://doi.org/10.1007/BF00020194