Skip to main content

Soil Biota, Impact on Physical Properties

  • Reference work entry
  • First Online:
Encyclopedia of Agrophysics

Part of the book series: Encyclopedia of Earth Sciences Series ((EESS))

Definition

The soil biota is made of all soil living organisms from microorganisms to macrofauna, including roots. Most of these organisms are considered as soil ecosystem engineers (Jones et al., 1994) involved in the formation of aggregates in soils and in the generation of the structural porosity. Their impact greatly differs according to the type of organism, soil conditions, and the soil biodiversity.

Soil biota: impact on physical properties

The soil living organisms range from eye-invisible microbes (bacteria and fungi) to macrofauna (termites, earthworms, etc.) with organisms of intermediary size as microfauna (protozoa, nematodes, etc.) and mesofauna (microarthropods, enchytraeids, etc.). Furthermore, although plants are primary producers and determine the amounts of carbon that enter the system via the aboveground system (Wardle, 2002), the root system, as a heterotrophic part of the plant, may also be considered as a soil organism as it is in close relationship with other...

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Chapter
USD 29.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 449.99
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Hardcover Book
USD 549.00
Price excludes VAT (USA)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

Bibliography

  • Andrade, G., Mihara, K. L., Linderman, R. G., and Bethlenfalvay, G. J., 1997. Bacteria from rhizosphere and hyphosphere soils of different arbuscular mycorrhizal fungi. Plant and Soil, 192, 71–79.

    CAS  Google Scholar 

  • Andrade, G., Linderman, R. G., and Bethlenfalvay, G. J., 1998. Bacterial associations with the mycorrhizosphere and hyphosphere of the arbuscular mycorrhizal fungus Glomus mosseae. Plant and Soil, 202, 79–87.

    CAS  Google Scholar 

  • Angers, D. A., and Caron, J., 1998. Plant-induced changes in soil structure: processes and feedbacks. Biogeochemistry, 42, 55–72.

    Google Scholar 

  • Artursson, V., Finlay, R. D., and Jansson, J. K., 2005. Combined bromodeoxyuridine immunocapture and terminal restriction fragment length polymorphism analysis highlights differences in the active soil bacterial metagenome due to Glomus mosseae inoculation or plant species. Environmental Microbiology, 7, 1952–1966.

    CAS  PubMed  Google Scholar 

  • Bardgett, R. D., 2005. The Biology of Soil. A Community and Ecosystem Approach. Oxford: Oxford University Press.

    Google Scholar 

  • Bronick, C. J., and Lal, R., 2005. Soil structure and management: a review. Geoderma, 124, 3–22.

    CAS  Google Scholar 

  • Chauvel, A., Grimaldi, M., Barros, E., Blanchart, E., Desjardins, T., Sarrazin, M., and Lavelle, P., 1999. Pasture damage by an Amazonian earthworm. Nature, 398, 32.

    CAS  Google Scholar 

  • Coleman, D. C., 2008. From peds to paradoxes: linkage between soil biota and their influences on ecological processes. Soil Biology and Biochemistry, 40, 271–289.

    CAS  Google Scholar 

  • Edwards, C. A., and Bohlen, P. J., 1996. Biology and Ecology of Earthworms. London: Chapman and Hall.

    Google Scholar 

  • Jones, C. G., Lawton, J. H., and Shachak, M., 1994. Organisms as ecosystem engineers. Oikos, 69, 373–386.

    Google Scholar 

  • Kay, B. D., 1998. Soil structure and organic carbon: a review. In Lal, R., Kimble, J. M., Follett, R. F., and Stewart, B. A. (eds.), Soil Processes and the Carbon Cycle. Boca Raton: CRC Press, pp. 169–197.

    Google Scholar 

  • Lavelle, P., Bignell, D., Lepage, M., Wolters, V., Roger, P., Ineson, P., Heal, O. W., and Dhillion, S., 1997. Soil function in a changing world: the role of invertebrate ecosystem engineers. European Journal of Soil Biology, 33, 159–193.

    CAS  Google Scholar 

  • Lee, K. E., 1985. Earthworms, their Ecology and Relationships with Soils and Land Use. Australia: Academic.

    Google Scholar 

  • Milleret, R., Le Bayon, C., Lamy, F., Gobat, J.-M., and Boivin, P., 2009. Impact of roots, mycorrhizas and earthworms on soil physical properties as assessed by shrinkage analysis. Journal of Hydrology, 373, 499–507.

    CAS  Google Scholar 

  • Shipitalo, M. J., and Protz, R., 1989. Chemistry and micromorphology of aggregation in earthworm casts. Geoderma, 45, 357–374.

    CAS  Google Scholar 

  • Six, J., Feller, C., Denef, K., Ogle, S. M., Sa, J. C. D., and Albrecht, A., 2002. Soil organic matter, biota and aggregation in temperate and tropical soils – effects of no-tillage. Agronomie, 22, 755–775.

    Google Scholar 

  • Six, J., Bossuyt, H., Degryze, S., and Denef, K., 2004. A history of research on the link between (micro) aggregates, soil biota and soil organic matter dynamics. Soil and Tillage Research, 79, 7–31.

    Google Scholar 

  • Thomas, R. S., Frauson, R. L., and Bethlenfalvay, G. J., 1993. Separation of vesicular-arbuscular mycorrhizal fungus and root effects on soil aggregation. Soil Science Society of America Journal, 57, 77–81.

    Google Scholar 

  • Van der Putten, W. H., Vet, L. E. M., Harvey, J. A., and Wackers, F. L., 2001. Linking above- and belowground multitrophic interactions of plants, herbivores, pathogens, and their antagonists. Trends in Ecology and Evolution, 16, 547–554.

    Google Scholar 

  • Wardle, D. A., 2002. Communities and Ecosystems: Linking the Aboveground and Belowground Components. Princeton: Princeton University Press.

    Google Scholar 

  • Wright, S. F., and Upadhyaya, A., 1996. Extraction of an abundant and unusual protein from soil and comparison with hyphal protein of arbuscular mycorrhizal fungi. Soil Science, 161, 575–586.

    CAS  Google Scholar 

  • Young, I., and Crawford, J. W., 2004. Interactions and self-organization in the soil–microbe complex. Science, 304, 1634–1637.

    CAS  PubMed  Google Scholar 

  • Zehe, E., and Flühler, H., 2001. Preferential transport of isoproturon at a plot scale and a field scale tile-drained site. Journal of Hydrology, 247, 100–115.

    CAS  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Pascal Boivin .

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2011 Springer Science+Business Media B.V.

About this entry

Cite this entry

Boivin, P., Kohler-Milleret, R. (2011). Soil Biota, Impact on Physical Properties. In: Gliński, J., Horabik, J., Lipiec, J. (eds) Encyclopedia of Agrophysics. Encyclopedia of Earth Sciences Series. Springer, Dordrecht. https://doi.org/10.1007/978-90-481-3585-1_145

Download citation

Publish with us

Policies and ethics