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Enumeration of RNA Secondary Structures by Complexity

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Mathematics in Biology and Medicine

Part of the book series: Lecture Notes in Biomathematics ((LNBM,volume 57))

Abstract

Many investigations in studying primary and secondary structures in Biology require theoretical statistical (that is enumerative) work. We solve one of these problems: enumerate secondary structures of single-stranded nucleic acids (RNA, tRNA, etc…) having a given complexity. This parameter has been introduced for energy computation purpose in order to predict the most stable secondary structure. The method relies on the (non-classical) use of non-commutative variables. Some orthogonal polynomials appear. The final solution shows a relationship between the parameter complexity and another parameter appearing in Hydrography and Botanic.

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© 1985 Springer-Verlag Berlin Heidelberg

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Viennot, G., Vauchaussade de Chaumont, M. (1985). Enumeration of RNA Secondary Structures by Complexity. In: Capasso, V., Grosso, E., Paveri-Fontana, S.L. (eds) Mathematics in Biology and Medicine. Lecture Notes in Biomathematics, vol 57. Springer, Berlin, Heidelberg. https://doi.org/10.1007/978-3-642-93287-8_50

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  • DOI: https://doi.org/10.1007/978-3-642-93287-8_50

  • Publisher Name: Springer, Berlin, Heidelberg

  • Print ISBN: 978-3-540-15200-2

  • Online ISBN: 978-3-642-93287-8

  • eBook Packages: Springer Book Archive

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