Abstract
A number of eukaryotic DNA binding domains are now known which recognise DNA by insertion of an α-helix (pre-existing or induced), into the major groove of the DNA, e.g. the homeobox, zinc finger and bZIP/bHLH motifs. The HMG box differs from these domains in three important respects: (1) the principle contacts are to the minor groove, (2) a considerable bend is introduced into the DNA on binding and (3) there is wide variation in the DNA sequence specificity between members of the HMG box family. From this it is clear that new principles will be revealed by understanding the nature of the interaction between the HMG box and DNA. However, the structure of an HMG box bound to DNA is not presently available.
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Read, C.M., Cary, P.D., Crane-Robinson, C., Driscoll, P.C., Carrillo, M.O.M., Norman, D.G. (1995). The Structure of the HMG Box and Its Interaction with DNA. In: Eckstein, F., Lilley, D.M.J. (eds) Nucleic Acids and Molecular Biology. Nucleic Acids and Molecular Biology, vol 9. Springer, Berlin, Heidelberg. https://doi.org/10.1007/978-3-642-79488-9_11
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