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Ontology Engineering with Rough Concepts and Instances

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Knowledge Engineering and Management by the Masses (EKAW 2010)

Part of the book series: Lecture Notes in Computer Science ((LNAI,volume 6317))

Abstract

A scenario in ontology development and its use is hypothesis testing, such as finding new subconcepts based on the data linked to the ontology. During such experimentation, knowledge tends to be vague and the associated data is often incomplete, which OWL ontologies normally do not consider explicitly. To fill this gap, we use OWL 2 and their application infrastructures together with rough sets. Although OWL 2 QL is insufficient to represent most of rough set’s semantics, the mapping layer of its Ontology-Based Data Access framework that links concepts in the ontology to queries over the data source suffice to ascertain if a concept is rough, which subsequently can be modelled more precisely in an OWL 2 DL ontology. We summarise the trade-offs and validate it with the HGT ontology and its 17GB genomics database and with sepsis, which demonstrates it is an encouraging step toward comprehensive and usable rough ontologies.

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References

  1. Keet, C.M., et al.: A survey of requirements for automated reasoning services for bio-ontologies in OWL. In: Proc. of OWLED 2007, CEUR-WS, vol. 258 (2007)

    Google Scholar 

  2. Marshall, M.S., et al.: Using semantic web tools to integrate experimental measurement data on our own terms. In: Meersman, R., Tari, Z., Herrero, P. (eds.) OTM 2006 Workshops. LNCS, vol. 4277, pp. 679–688. Springer, Heidelberg (2006)

    Chapter  Google Scholar 

  3. Bobillo, F., Straccia, U.: Supporting fuzzy rough sets in fuzzy description logics. In: Sossai, C., Chemello, G. (eds.) ECSQARU 2009. LNCS, vol. 5590, pp. 676–687. Springer, Heidelberg (2009)

    Google Scholar 

  4. Fanizzi, N., et al.: Representing uncertain concepts in rough description logics via contextual indiscernibility relations. In: Proc. of URSW 2008, CEUR-WS, vol. 423 (2008)

    Google Scholar 

  5. Ishizu, S., et al.: Rough ontology: extension of ontologies by rough sets. In: Smith, M.J., Salvendy, G. (eds.) HCII 2007. LNCS, vol. 4557, pp. 456–462. Springer, Heidelberg (2007)

    Chapter  Google Scholar 

  6. Jiang, Y., Wang, J., Tang, S., Xiao, B.: Reasoning with rough description logics: An approximate concepts approach. Inform. Sciences 179, 600–612 (2009)

    Article  MathSciNet  MATH  Google Scholar 

  7. Liau, C.J.: On rough terminological logics. In: Proceedings of the 4th International Workshop on Rough Sets, Fuzzy Sets and Machine Discovery (RSFD 1996), pp. 47–54 (1996)

    Google Scholar 

  8. Schlobach, S., Klein, M., Peelen, L.: Description logics with approximate definitions—precise modeling of vague concepts. In: Proc. of IJCAI 2007, pp. 557–562. AAAI Press, Menlo Park (2007)

    Google Scholar 

  9. Calvanese, D., et al.: Ontologies and databases: The DL-Lite approach. In: Tessaris, S., Franconi, E., Eiter, T., Gutierrez, C., Handschuh, S., Rousset, M.-C., Schmidt, R.A. (eds.) Reasoning Web 2009. LNCS, vol. 5689, pp. 255–356. Springer, Heidelberg (2009)

    Google Scholar 

  10. Pawlak, Z., Skowron, A.: Rudiments of rough sets. Inform. Sciences 177(1), 3–27 (2007)

    Article  MathSciNet  MATH  Google Scholar 

  11. Keet, C.M.: On the feasibility of description logic knowledge bases with rough concepts and vague instances. In: Proc. of DL 2010, CEUR-WS, Waterloo, Canada, pp. 314–324 (2010)

    Google Scholar 

  12. Motik, B., Patel-Schneider, P.F., Cuenca-Grau, B.: OWL 2 web ontology language: Direct semantics. W3c recommendation, W3C (October 27, 2009)

    Google Scholar 

  13. Motik, B., et al.: OWL 2 Web Ontology Language Profiles. W3c recommendation, W3C (October 27, 2009), http://www.w3.org/TR/owl2-profiles/

  14. Garcia-Vallvé, S., et al.: HGT-DB: a database of putative horizontally transferred genes in prokaryotic complete genomes. Nucleic Acids Research 31(1), 187–189 (2003)

    Article  Google Scholar 

  15. Lutz, C., Toman, D., Wolter, F.: Conjunctive query answering in the description logic EL using a relational database system. In: Proc. of IJCAI 2009. AAAI Press, Menlo Park (2009)

    Google Scholar 

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Keet, C.M. (2010). Ontology Engineering with Rough Concepts and Instances. In: Cimiano, P., Pinto, H.S. (eds) Knowledge Engineering and Management by the Masses. EKAW 2010. Lecture Notes in Computer Science(), vol 6317. Springer, Berlin, Heidelberg. https://doi.org/10.1007/978-3-642-16438-5_40

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  • DOI: https://doi.org/10.1007/978-3-642-16438-5_40

  • Publisher Name: Springer, Berlin, Heidelberg

  • Print ISBN: 978-3-642-16437-8

  • Online ISBN: 978-3-642-16438-5

  • eBook Packages: Computer ScienceComputer Science (R0)

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