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Analysis of Distance/Similarity Measures for Diffusion Tensor Imaging

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Visualization and Processing of Tensor Fields

Part of the book series: Mathematics and Visualization ((MATHVISUAL))

Summary

Many different measures have been proposed to compute similarities and distances between diffusion tensors. These measures are commonly used for algorithms such as segmentation, registration, and quantitative analysis of Diffusion Tensor Imaging data sets. The results obtained from these algorithms are extremely dependent on the chosen measure. The measures presented in literature can be of complete different nature, and it is often difficult to predict the behavior of a given measure for a specific application. In this chapter, we classify and summarize the different measures that have been presented in literature. We also present a framework to analyze and compare the behavior of the measures according to several selected properties. We expect that this framework will help in the initial selection of a measure for a given application and to identify when the generation of a new measure is needed. This framework will also allow the comparison of new measures with existing ones.

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References

  1. D. Alexander, J. Gee, and R. Bajcsy. Similarity measures for matching diffusion tensor images. In Proceedings of the British Machine Vision Conference (BMVC), 93–102, 1999.

    Google Scholar 

  2. V. Arsigny, P. Fillard, X. Pennec, and N. Ayache. Log-Euclidean metrics for fast and simple calculus on diffusion tensors. Magnetic Resonance in Medicine, 56(2):411–421, 2006.

    Article  Google Scholar 

  3. P. J. Basser and C. Pierpaoli. Microstructural and physiological features of tissues elucidated by quantitative-diffusion-tensor MRI. Journal of Magnetic Resonance, 111(3):209–219, 1996.

    Google Scholar 

  4. P.G. Batchelor, M. Moakher, D. Atkinson, F. Clamante, and A. Connelly. A rigorous framework for diffusion tensor calculus. Magnetic Resonance in Medicine, 53:221–225, 2005.

    Article  Google Scholar 

  5. D. Comaniciu, V. Ramesh, and P. Meer. Kernel-based object tracking, IEEE Transactions on Pattern Analysis and Machine Intelligence, 25:564–577, 2003.

    Article  Google Scholar 

  6. R.O. Duda, P.E. Hart, and D.G. Stork. Pattern Classification (2nd Edition). Wiley, New York, 2000.

    Google Scholar 

  7. L. Jonasson, X. Bresson, P. Hagmann, O. Cuisenaire, R. Meuli, and J. Thiran. White matter fiber tract segmentation in DT-MRI using geometric fbws. Medical Image Analysis, 9(3):223–236, 2005.

    Article  Google Scholar 

  8. G. Kindlmann. Visualization and Analysis of Diffusion Tensor Fields. PhD thesis, School of Computing, University of Utah, 2004.

    Google Scholar 

  9. G.L. Kindlmann, R.S.J. Estpar, M. Niethammer, S. Haker, and C.-F. Westin. Geodesic-loxodromes for diffusion tensor interpolation and difference measurement. In N. Ayache, S. Ourselin, and A. Maeder, editors, MICCAI (1), volume 4791 of Lecture Notes in Computer Science, pages 1–9. Springer, 2007.

    Google Scholar 

  10. J. Lötjönen, M. Pollari, T. Neuvonen. Affine registration of diffusion tensor MR images. In MICCAI 2006, Springer, Berlin Heidelberg, pp. 629–636, 2006.

    Google Scholar 

  11. E.R. Melhem, S. Mori, G. Mukundan, M.A. Kraut, M.G. Pomper, and P.C.M. van Zijl. Diffusion tensor MR imaging of the brain and white matter tractography. American Journal of Roentgenology, 178(1):3–16, 2002.

    Google Scholar 

  12. X. Pennec, P. Fillard, and N. Ayache. A riemannian framework for tensor computing. International Journal of Computer Vision, 66(1):41–66, 2006.

    Article  MathSciNet  Google Scholar 

  13. C. Pierpaoli and P. J. Basser. Toward a quantitative assessment of diffusion anisotropy. Magnetic Resonance in Medicine, 36:893–906, 1996.

    Article  Google Scholar 

  14. M. Rousson, C. Lenglet, and R. Deriche. Level set and region based surface propagation for diffusion tensor MRI segmentation. In Computer Vision Approaches to Medical Image Analysis (CVAMIA) and Mathematical Methods in Biomedical Image Analysis (MMBIA) Workshop, Prague, May 2004.

    Google Scholar 

  15. A. Vilanova, S. Zhang, G. Kindlmann, and D. Laidlaw. An introduction to visualization of diffusion tensor imaging and its applications. In J. Weickert and H. Hagen, editors, Visualization and Processing of Tensor Fields, Mathematics and Visualization, chapter 7, Springer, Berlin Heidelberg, pp. 121–153, 2005.

    Google Scholar 

  16. Z. Wang and B.C. Vemuri. DTI segmentation using an information theoretic tensor dissimilarity measure. IEEE Transactions on Medical Imaging, 24(10):1267–1277, 2005.

    Article  Google Scholar 

  17. C.-F. Westin, S. Peled, H. Gudbjartsson, R. Kikinis, and F.A. Jolesz. Geometrical diffusion measures for MRI from tensor basis analysis. In ISMRM ’97, pp. 1742, 1997.

    Google Scholar 

  18. H. Zhang, P.A. Yushkevich, D.C. Alexander, and J.C. Gee. Deformable registration of diffusion tensor MR images with explicit orientation optimization. Medical Image Analysis - Special Issue: The Eighth International Conference on Medical Imaging and Computer Assisted intervention - MICCAI 2005, 10(5):764–785, October 2006. Invited submission. PMID: 16899392.

    Google Scholar 

  19. L. Zhukov and A.H. Barr. Heart-muscle fiber reconstruction from diffusion tensor MRI. In Proceedings of IEEE Visualization 2003, IEEE Computer Society, pp. 597–602, 2003.

    Google Scholar 

  20. L. Zhukov, K. Museth, D. Breen , R. Whitaker, and A. Barr. Level set modeling and segmentation of DT-MRI brain data, Journal of Electronic Imaging, 12:125–133, 2003.

    Article  Google Scholar 

  21. U. Ziyan, D. Tuch, and C. Westin. Segmentation of thalamic nuclei from DTI using spectral clustering. In Ninth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI’06), Lecture Notes in Computer Science 4191, Copenhagen, Denmark, pp. 807–814, 2006.

    Google Scholar 

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Acknowledgments

We thank Laura Astola for her insights in statistics and Riemannian geometry. This work was supported by the Dutch BSIK program entitled Molecular Imaging of Ischemic heart disease (project number BSIK 03033), Fundação para a Ciência e a Tecnologia (FCT, Portugal) under grant SFRH/BD/24467/ 2005, and the Netherlands Organization for Scientific Research (NWO-VENI grant 639.021.407).

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Peeters, T.H.J.M., Rodrigues, P.R., Vilanova, A., ter Haar Romeny, B.M. (2009). Analysis of Distance/Similarity Measures for Diffusion Tensor Imaging. In: Laidlaw, D., Weickert, J. (eds) Visualization and Processing of Tensor Fields. Mathematics and Visualization. Springer, Berlin, Heidelberg. https://doi.org/10.1007/978-3-540-88378-4_6

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