Abstract
Statistical shape models (SSM) describe the shape variability contained in a given population. They are able to describe large populations of complex shapes with few degrees of freedom. This makes them a useful tool for a variety of tasks that arise in computer-aided medicine. In this chapter we are going to explain the basic methodology of SSMs and present a variety of examples, where SSMs have been successfully applied.
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References
Bindernagel M, Kainmueller D, Seim H, Lamecker H, Zachow S, Hege H-C (2011) An articulated statistical shape model of the human knee. In: Bildverarbeitung für die Medizin 2011, pp 59–63. doi:10.1007/978-3-642-19335-4_14
Cootes TF, Taylor CJ, Cooper DH, Graham J (1995) Active shape models—their training and application. Comput Vis Image Underst 610(1):38–59. doi:10.1006/cviu.1995.1004 ISSN 1077-3142
Davies R, Twining C, Cootes T, Waterton J, Taylor C (2002) A minimum description length approach to statistical shape modeling. IEEE Trans Med Imaging 210(5):525–537. ISSN 0278-0062. doi:10.1109/TMI.2002.1009388
Ehlke M, Ramm H, Lamecker H, Hege H-C, Zachow S (2013) Fast generation of virtual x-ray images for reconstruction of 3d anatomy. IEEE Trans Visual Comput Graph 190(12):2673–2682. doi:10.1109/TVCG.2013.159
Ehlke M, Frenzel T, Ramm H, Lamecker H, Shandiz MA, Anglin C, Zachow S (2014) Robust measurement of natural acetabular orientation from ap radiographs using articulated 3d shape and intensity models. Technical Report 14–12, ZIB, Takustr.7, 14195 Berlin, 2014
Ehlke M, Frenzel T, Ramm H, Shandiz MA, Anglin C, Zachow S (2015) Towards robust measurement of pelvic parameters from ap radiographs using articulated 3d models. In Computer Assisted Radiology and Surgery (CARS), 2015. accepted for publication
Galloway F, Kahnt M, Ramm H, Worsley P, Zachow S, Nair P, Taylor M (2013) A large scale finite element study of a cementless osseointegrated tibial tray. J Biomech 460(11):1900–1906. doi:10.1016/j.jbiomech.2013.04.021
Grewe CM, Lamecker H, Zachow S (2011) Digital morphometry: the potential of statistical shape models, 2011
Grewe CM, Lamecker H, Zachow S (2013) Landmark-based statistical shape analysis. In: Hermanussen M (Ed) Auxology—studying human growth and development url, pp 199–201. Schweizerbart Science Publishers, 2013. URL http://www.schweizerbart.de/publications/detail/isbn/9783510652785
Heimann T, Meinzer H-P (2009) Statistical shape models for 3d medical image segmentation: a review. Med Image Anal 130(4):543–563. ISSN 1361-8415. URL http://dx.doi.org/10.1016/j.media.2009.05.004, http://www.sciencedirect.com/science/article/pii/S1361841509000425
Hermanussen EM (Ed) Auxology. Schweizerbart Science Publishers, Stuttgart, Germany, 03 2013. ISBN 9783510652785. URL http://www.schweizerbart.de//publications/detail/isbn/9783510652785/Hermanussen_Auxology
Hochfeld M, Lamecker H, Thomale UW, Schulz M, Zachow S, Haberl H (2014) Frame-based cranial reconstruction. J Neurosurg Pediatr 130(3):319–323. doi:10.3171/2013.11.PEDS1369
Kainmüller D, Lamecker H, Heller M, Weber B, Hege H-C, Zachow S (2013) Omnidirectional displacements for deformable surfaces. Med Image Anal 170(4):429–441. doi:10.1016/j.media.2012.11.006
Kaiser H (1958) The varimax criterion for analytic rotation in factor analysis. Psychometrika 230(3):187–200. doi:10.1007/BF02289233 ISSN 0033-3123
Kozic N, Weber S, Büchler P, Lutz C, Reimers N, Ballester MG, Reyes M (2010) Optimisation of orthopaedic implant design using statistical shape space analysis based on level sets. Med Image Anal 140(3):265–275. ISSN 1361-8415. doi:http://dx.doi.org/10.1016/j.media.2010.02.008. URL http://www.sciencedirect.com/science/article/pii/S136184151000023X
Lamecker H (2009) Variational and statistical shape modeling for 3D geometry reconstruction. PhD thesis, Freie Universität Berlin
Lamecker H, Wenckebach T, Hege H-C (2006) Atlas-based 3d-shape reconstruction from x-ray images. In: Proceedings of international conference of pattern recognition (ICPR2006), vol I, pp 371–374. doi:10.1109/ICPR.2006.279
Lamecker H, Zachow S, Hege H-C, Zöckler M (2006) Surgical treatment of craniosynostosis based on a statistical 3d-shape model. Int. J. Comput Assist Radiol Surg 1(1):253–254. doi:10.1007/s11548-006-0024-x
Sarkalkan N, Weinans H, Zadpoor AA (2014) Statistical shape and appearance models of bones. Bone 600(0):129–140. ISSN 8756-3282. doi:http://dx.doi.org/10.1016/j.bone.2013.12.006. URL http://www.sciencedirect.com/science/article/pii/S8756328213004948
Seim H, Kainmueller D, Lamecker H, Bindernagel M, Malinowski J, Zachow S (2010) Model-based auto-segmentation of knee bones and cartilage in MRI data. In: Ginneken BV (Ed), Proceedings of MICCAI workshop medical image analysis for the clinic, pp 215–223
Zachow S, Lamecker H, Elsholtz B, Stiller M (2005) Reconstruction of mandibular dysplasia using a statistical 3d shape model. In: Proceedings of computer assisted radiology and surgery (CARS), pp 1238–1243. doi:10.1016/j.ics.2005.03.339
Zachow S, Kubiack K, Malinowski J, Lamecker H, Essig H, Gellrich N-C (2010) Modellgestützte chirurgische rekonstruktion komplexer mittelgesichtsfrakturen. Proc BMT Biomed Tech 2010 55(1):107–108
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Lamecker, H., Zachow, S. (2016). Statistical Shape Modeling of Musculoskeletal Structures and Its Applications. In: Zheng, G., Li, S. (eds) Computational Radiology for Orthopaedic Interventions. Lecture Notes in Computational Vision and Biomechanics, vol 23. Springer, Cham. https://doi.org/10.1007/978-3-319-23482-3_1
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DOI: https://doi.org/10.1007/978-3-319-23482-3_1
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