Abstract
With the ongoing development of neuroimaging technology, neuroimaging classification has become a popular and challenging topic. The high dimension and small sample size characteristics pose many challenges to neuroimaging classification. The traditional neuroimaging classification solutions are tensor-based models, which may not fully consider the structural information and can’t mine the essential features of the input data. Considering the complicated properties of the neuroimaging data, a deep learning based algorithm—the hierarchical convolutional sparse auto-encoder (HCSAE) considering all dimensional information together is proposed in this paper. The HCSAE treats different convolutional sparse auto-encoder (CSAE) in an unsupervised hierarchical mode, where the CSAE extracts the essential features of the input by the sparse auto-encoder (SAE) and encodes the inputs in a convolutional manner, which helps to extract efficient and robust features and conserve abundant detail information for the neuroimaging classification. The proposed algorithm was verified by three human brain fMRI classification datasets, and showed a great potential compared with the traditional classification algorithms.
Access this chapter
Tax calculation will be finalised at checkout
Purchases are for personal use only
Preview
Unable to display preview. Download preview PDF.
References
Craddock, R., James, G., Holtzheimer, P., Hu, X., Mayberg, H.: A whole brain fmri atlas generated via spatially constrained spectral clustering. Human Brain Mapping (2012)
Bihan, D.L., Breton, E., Lallemand, D., Grenier, P., Cabanis, E., Laval-Jeantet, M.: Brain, mind, and the evolution of connectivity. Radiology 161(2), 401–407 (1986)
Basser, P., Pierpaoli, C.: Microstructural and physiological features of tissues elucidated by quantitative diffusion-tensor fmri. J. of Magnetic Resonance, Series B 111(3), 209–219 (1996)
McKeown, M., Makeig, S., Brown, G., Jung, T., Kindermann, S., Bell, A., Sejnowski, T.: Analysis of fmri data by blind separation into independent spatial components. Human Brain Mapping 6, 160–188 (1998)
He, L., Kong, X., Yu, P., Ragin, A., Hao, Z.: Dusk: a dual structure-preserving kernel for supervised tensor learning with applications to neuroimages. In: SDM (2014)
Sporns, O., Tononi, G., Kotter, R.: The human connectome: A structural description of the human brain. PLoS Computational Biology (2005)
Bengio, Y.: Learning Deep Architectures for AI, Foundations and Trends in Machine Learning (2009)
Hinton, G.E., Salakhutdinov, R.R.: Reducing the dimensionality of data with neural networks. Science 313(5786), 504–506 (2006)
Ng, A.: Sparse autoencoder, CS294A Lecture notes on Stanford University (2010)
LeCun, Y., Bengio, Y.: Convolutional networks for images, speech, and time-series. In: Arbib, M.A. (ed.) The Handbook of Brain Theory and Neural Networks. MIT Press (1995)
Scherer, D., Müller, A., Behnke, S.: Evaluation of pooling operations in convolutional architectures for object recognition. In: Diamantaras, K., Duch, W., Iliadis, L.S. (eds.) ICANN 2010, Part III. LNCS, vol. 6354, pp. 92–101. Springer, Heidelberg (2010)
Hinton, G.E., Srivastava, N., Krizhevsky, A., Sutskever, I., Salakhutdinov, R.: Improving neural networks by preventing co-adaptation of feature detectors. CoRR, abs/1207.0580 (2012)
Krizhevsky, A., Sutskever, I., Hinton, G.E.: ImageNet classification with deep convolutional neural networks. In: Proc. Of NIPS (2012)
Lee, T.S., Mumford, D., Romero, R., et al.: The role of the primary visual cortex in higher level vision. Vision Research 38(15–16), 2429–2454 (1998)
LeRoux, N., Bengio, Y.: Deep belief networks are compact universal approximations. Neural Comput. 22(8), 2192–2207 (2010)
Zhang, F., Du, B., Zhang, L.: Saliency-Guided Unsupervised Feature Learning for Scene Classification. IEEE Transactions on Geoscience and Remote Sensing 53, 2175–2184 (2014)
Wang, X., Foryt, P., Ochs, R., Chung, J., Wu, Y., Parrish, T., Ragin, A.: Abnormalities in resting-state functional connectivity in early human immunodeficiency virus infection. Brain Connectivity 1(3), 207 (2011)
Coates, A., Ng, A.Y., Lee, H.: An analysis of single-layer networks in unsupervised feature learning. In: Proc .Int. Conf. Artificial Intelligence and Statistics, pp. 215–223 (2011)
Author information
Authors and Affiliations
Corresponding author
Editor information
Editors and Affiliations
Rights and permissions
Copyright information
© 2015 Springer International Publishing Switzerland
About this paper
Cite this paper
Han, X., Zhong, Y., He, L., Yu, P.S., Zhang, L. (2015). The Unsupervised Hierarchical Convolutional Sparse Auto-Encoder for Neuroimaging Data Classification. In: Guo, Y., Friston, K., Aldo, F., Hill, S., Peng, H. (eds) Brain Informatics and Health. BIH 2015. Lecture Notes in Computer Science(), vol 9250. Springer, Cham. https://doi.org/10.1007/978-3-319-23344-4_16
Download citation
DOI: https://doi.org/10.1007/978-3-319-23344-4_16
Published:
Publisher Name: Springer, Cham
Print ISBN: 978-3-319-23343-7
Online ISBN: 978-3-319-23344-4
eBook Packages: Computer ScienceComputer Science (R0)