Abstract
We propose a novel stereo laparoscopy video-based non-rigid SLAM method called EMDQ-SLAM, which can incrementally reconstruct thee-dimensional (3D) models of soft tissue surfaces in real-time and preserve high-resolution color textures. EMDQ-SLAM uses the expectation maximization and dual quaternion (EMDQ) algorithm combined with SURF features to track the camera motion and estimate tissue deformation between video frames. To overcome the problem of accumulative errors over time, we have integrated a g2o-based graph optimization method that combines the EMDQ mismatch removal and as-rigid-as-possible (ARAP) smoothing methods. Finally, the multi-band blending (MBB) algorithm has been used to obtain high resolution color textures with real-time performance. Experimental results demonstrate that our method outperforms two state-of-the-art non-rigid SLAM methods: MISSLAM and DefSLAM. Quantitative evaluation shows an average error in the range of 0.8–2.2 mm for different cases.
Access this chapter
Tax calculation will be finalised at checkout
Purchases are for personal use only
Similar content being viewed by others
References
Maier-Hein, L., et al.: Optical techniques for 3D surface reconstruction in computer-assisted laparoscopic surgery. Med. Image Anal. 17(8), 974–996 (2013)
Totz, J., Mountney, P., Stoyanov, D., Yang, G.-Z.: Dense surface reconstruction for enhanced navigation in MIS. In: Fichtinger, G., Martel, A., Peters, T. (eds.) MICCAI 2011. LNCS, vol. 6891, pp. 89–96. Springer, Heidelberg (2011). https://doi.org/10.1007/978-3-642-23623-5_12
Lacher, R.M., et al.: Nonrigid reconstruction of 3D breast surfaces with a low-cost RGBD camera for surgical planning and aesthetic evaluation. Med. Image Anal. 53, 11–25 (2019)
Newcombe, R.A., Fox, D., Seitz, S.M.: DynamicFusion: reconstruction and tracking of non-rigid scenes in real-time. In: CVPR, pp. 343–352 (2015)
Miroslava, S., Baust, M., Ilic, S.: Variational level set evolution for non-rigid 3D reconstruction from a single depth camera. IEEE TPAMI (2020)
Miroslava, S., Baust, M., Ilic, S.: SobolevFusion: 3D reconstruction of scenes undergoing free non-rigid motion. In: CVPR, pp. 2646–2655 (2018)
Cadena, C., et al.: Past, present, and future of simultaneous localization and mapping: toward the robust-perception age. IEEE Trans. Rob., 1309–1332 (2016)
Mahmoud, N., Hostettler, A., Collins, T., Soler, L., Doignon, C., Montiel, J.M.: SLAM based quasi dense reconstruction for minimally invasive surgery scenes. arXiv preprint arXiv:1705.09107 (2017)
Mahmoud, N., Collins, T., Hostettler, A., Soler, L., Doignon, C., Montiel, J.M.: Live tracking and dense reconstruction for handheld monocular endoscopy. IEEE Trans. Med. Imaging 13, 38(1), 79–89 (2018)
Mountney, P., Yang, G.-Z.: Motion compensated SLAM for image guided surgery. In: Jiang, T., Navab, N., Pluim, J.P.W., Viergever, M.A. (eds.) MICCAI 2010. LNCS, vol. 6362, pp. 496–504. Springer, Heidelberg (2010). https://doi.org/10.1007/978-3-642-15745-5_61
Collins, T., Bartoli, A., Bourdel, N., Canis, M.: Robust, real-time, dense and deformable 3D organ tracking in laparoscopic videos. In: Ourselin, S., Joskowicz, L., Sabuncu, M.R., Unal, G., Wells, W. (eds.) MICCAI 2016. LNCS, vol. 9900, pp. 404–412. Springer, Cham (2016). https://doi.org/10.1007/978-3-319-46720-7_47
Schoob, A., Kundrat, D., Kahrs, L.A., Ortmaier, T.: Stereo vision-based tracking of soft tissue motion with application to online ablation control in laser microsurgery. Med. Image Anal., 80–95 (2017)
Modrzejewski, R., Collins, T., Bartoli, A., Hostettler, A., Marescaux, J.: Soft-body registration of pre-operative 3D models to intra-operative RGBD partial body scans. In: Frangi, A.F., Schnabel, J.A., Davatzikos, C., Alberola-López, C., Fichtinger, G. (eds.) MICCAI 2018. LNCS, vol. 11073, pp. 39–46. Springer, Cham (2018). https://doi.org/10.1007/978-3-030-00937-3_5
Petit, A., Lippiello, V., Siciliano, B.: Real-time Tracking of 3D Elastic Objects with an RGB-D Sensor. In: IROS (2015)
Song, J., Wang, J., Zhao, L., Huang, S., Dissanayake, G.: MIS-SLAM: real-time large-scale dense deformable SLAM system in minimal invasive surgery based on heterogeneous computing. IEEE Rob. Autom. Lett. 3(4), 4068–4075 (2018)
Lamarca, J., Parashar, S., Bartoli, A., Montiel, J.M.: DefSLAM: tracking and mapping of deforming scenes from monocular sequences. IEEE Trans. Rob. (2020)
Zhou, H., Jayender, J.: Smooth deformation field-based mismatch removal in real-time. arXiv preprint arXiv:2007.08553 (2020)
Kmmerle, R., Grisetti, G., Strasdat, H., Konolige, K., Burgard, W.: G2o: a general framework for graph optimization. In: ICRA, pp. 3607–3613 (2011)
Brown, M., Lowe, D.G.: Automatic panoramic image stitching using invariant features. Int. J. Comput. Vision 74(1), 59–73 (2007)
Mur-Artal, R., Tard, J.D.: ORB-SLAM2: an open-source SLAM system for monocular, stereo, and RGB-D cameras. IEEE Trans. Rob., 1255–1262 (2017)
Zhou, H., Jayender, J.: Real-time dense reconstruction of tissue surface from stereo optical video. IEEE Trans. Med. Imaging 39(2), 400–412 (2019)
Arun, K.S., Huang, T.S., Blostein, S.D.: Least-squares fitting of two 3-D point sets. IEEE TPAM I, 698–700 (1987)
Bay, H., Tuytelaars, T., Van Gool, L.: SURF: speeded up robust features. In: Leonardis, A., Bischof, H., Pinz, A. (eds.) ECCV 2006. LNCS, vol. 3951, pp. 404–417. Springer, Heidelberg (2006). https://doi.org/10.1007/11744023_32
Sorkine, O., Alexa, M.: As-Rigid-As-Possible Surface Modeling. In: Symposium on Geometry Processing, vol. 4, pp. 109–116 (2007)
Osher, S., Fedkiw, R.: Level Set Methods and Dynamic Implicit Surfaces. AMS, vol. 153. Springer, New York (2003). https://doi.org/10.1007/b98879
Acknowledgments
This project was supported by the National Institute of Biomedical Imaging and Bioengineering of the National Institutes of Health through Grant Numbers K99EB027177, R01EB025964 and P41EB015898. Unrelated to this publication, Jagadeesan Jayender owns equity in Navigation Sciences, Inc. He is a co-inventor of a navigation device to assist surgeons in tumor excision that is licensed to Navigation Sciences. Dr. Jayender interests were reviewed and are managed by BWH and Partners HealthCare in accordance with their conflict of interest policies.
Author information
Authors and Affiliations
Corresponding author
Editor information
Editors and Affiliations
Rights and permissions
Copyright information
© 2021 Springer Nature Switzerland AG
About this paper
Cite this paper
Zhou, H., Jayender, J. (2021). EMDQ-SLAM: Real-Time High-Resolution Reconstruction of Soft Tissue Surface from Stereo Laparoscopy Videos. In: de Bruijne, M., et al. Medical Image Computing and Computer Assisted Intervention – MICCAI 2021. MICCAI 2021. Lecture Notes in Computer Science(), vol 12904. Springer, Cham. https://doi.org/10.1007/978-3-030-87202-1_32
Download citation
DOI: https://doi.org/10.1007/978-3-030-87202-1_32
Published:
Publisher Name: Springer, Cham
Print ISBN: 978-3-030-87201-4
Online ISBN: 978-3-030-87202-1
eBook Packages: Computer ScienceComputer Science (R0)