Skip to main content

Real-Time Visualization and Quantification of Native Ras Activation in Single Living Cells

  • Protocol
  • First Online:
Ras Signaling

Part of the book series: Methods in Molecular Biology ((MIMB,volume 1120))

Abstract

Members of the Ras family of small guanosine triphosphate phosphohydrolases are GDP/GTP-binding proteins that function as pivotal molecular switches in multiple cell biological processes. The prototypical Ras family members K-Ras, N-Ras, and H-Ras, in particular, have been the focus of intense research for the last 30 years owing to their critical function as signalling nodes in the control of cell growth and proliferation and as drivers of oncogenic transformation. One aspect that has attracted much attention in recent times is the spatial control of Ras activity, which is dictated largely by a series of posttranslational modifications that do effectively govern the subcellular distribution and trafficking of Ras. Accordingly, strong emphasis has been placed on developing methodological microscopy-based approaches for the visualization of active Ras-GTP complexes at subcellular resolution. Here we describe the use of a collection of fluorescent affinity probes for the real-time visualization of Ras-GTP in live cells. These probes are multivalent and thus feature high avidity/affinity to Ras-GTP, which obviates the over-expression of Ras and enables one to image endogenous Ras-GTP formation. In addition, this chapter details the use of automated segmentation strategies for the unbiased quantification of probe-derived fluorescence at individual subcellular sites like the plasma membrane and endomembranes.

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Protocol
USD 49.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 89.00
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD 119.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info
Hardcover Book
USD 169.99
Price excludes VAT (USA)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

References

  1. Karnoub AE, Weinberg RA (2008) Ras oncogenes: split personalities. Nat Rev Mol Cell Biol 9:517–531

    Article  PubMed  CAS  PubMed Central  Google Scholar 

  2. Herrmann C, Martin GA, Wittinghofer A (1995) Quantitative analysis of the complex between p21ras and the Ras-binding domain of the human Raf-1 protein kinase. J Biol Chem 270:2901–2905

    Article  PubMed  CAS  Google Scholar 

  3. Herrmann C, Horn G, Spaargaren M et al (1996) Differential interaction of the ras family GTP-binding proteins H-Ras, Rap1A, and R-Ras with the putative effector molecules Raf kinase and Ral-guanine nucleotide exchange factor. J Biol Chem 271:6794–6800

    Article  PubMed  CAS  Google Scholar 

  4. Nassar N, Horn G, Herrmann C et al (1995) The 2.2 A crystal structure of the Ras-binding domain of the serine/threonine kinase c-Raf1 in complex with Rap1A and a GTP analogue. Nature 375:554–560

    Article  PubMed  CAS  Google Scholar 

  5. Mochizuki N, Yamashita S, Kurokawa K et al (2001) Spatio-temporal images of growth-factor-induced activation of Ras and Rap1. Nature 411:1065–1068

    Article  PubMed  CAS  Google Scholar 

  6. Sawano A, Takayama S, Matsuda M et al (2002) Lateral propagation of EGF signaling after local stimulation is dependent on receptor density. Develop Cell 3:245–257

    Article  CAS  Google Scholar 

  7. Chiu VK, Bivona T, Hach A et al (2002) Ras signalling on the endoplasmic reticulum and the Golgi. Nat Cell Biol 4:343–350

    PubMed  CAS  Google Scholar 

  8. Bivona TG, Perez De Castro I, Ahearn IM et al (2003) Phospholipase C gamma activates Ras on the Golgi apparatus by means of RasGRP1. Nature 424:694–698

    Article  PubMed  CAS  Google Scholar 

  9. Mohney RP, Das M, Bivona TG et al (2003) Intersectin activates Ras but stimulates transcription through an independent pathway involving JNK. J Biol Chem 278:47038–47045

    Article  PubMed  CAS  Google Scholar 

  10. Perez de Castro I, Bivona TG, Philips MR et al (2004) Ras activation in Jurkat T cells following low-grade stimulation of the T-cell receptor is specific to N-Ras and occurs only on the Golgi apparatus. Mol Cell Biol 24:3485–3496

    Article  PubMed  PubMed Central  Google Scholar 

  11. Walker SA, Kupzig S, Bouyoucef D et al (2004) Identification of a Ras GTPase-activating protein regulated by receptor-mediated Ca2+ oscillations. EMBO J 23:1749–1760

    Article  PubMed  CAS  PubMed Central  Google Scholar 

  12. Zhang SQ, Yang W, Kontaridis MI et al (2004) Shp2 regulates SRC family kinase activity and Ras/Erk activation by controlling Csk recruitment. Mol Cell 13:341–355

    Article  PubMed  Google Scholar 

  13. Augsten M, Pusch R, Biskup C et al (2006) Live-cell imaging of endogenous Ras-GTP illustrates predominant Ras activation at the plasma membrane. EMBO Rep 7:46–51

    Article  PubMed  CAS  PubMed Central  Google Scholar 

  14. Genove G, Glick BS, Barth AL (2005) Brighter reporter genes from multimerized fluorescent proteins. Biotechniques 39:814, 816, 818 passim

    Article  PubMed  CAS  Google Scholar 

  15. Nassar N, Horn G, Herrmann C et al (1996) Ras/Rap effector specificity determined by charge reversal. Nat Struct Biol 3:723–729

    Article  PubMed  CAS  Google Scholar 

  16. Rubio I, Grund S, Song SP et al (2010) TCR-induced activation of Ras proceeds at the plasma membrane and requires palmitoylation of N-Ras. J Immunol 185:3536–3543

    Article  PubMed  CAS  Google Scholar 

  17. Leadsham JE, Miller K, Ayscough KR et al (2009) Whi2p links nutritional sensing to actin-dependent Ras-cAMP-PKA regulation and apoptosis in yeast. J Cell Sci 122:706–715

    Article  PubMed  CAS  PubMed Central  Google Scholar 

  18. Broggi S, Martegani E, Colombo S (2012) Live-cell imaging of endogenous Ras-GTP shows predominant Ras activation at the plasma membrane and in the nucleus in Saccharomyces cerevisiae. Int J Biochem Cell Biol 45:384–394

    Article  PubMed  Google Scholar 

  19. Wu RF, Ma Z, Liu Z et al (2010) Nox4-derived H2O2 mediates endoplasmic reticulum signaling through local Ras activation. Mol Cell Biol 30:3553–3568

    Article  PubMed  CAS  PubMed Central  Google Scholar 

Download references

Acknowledgements

We acknowledge support by the Novartis Stiftung für Therapeutische Forschung to IR.

Author information

Authors and Affiliations

Authors

Editor information

Editors and Affiliations

Appendix

Appendix

Rights and permissions

Reprints and permissions

Copyright information

© 2014 Springer Science+Business Media, LLC

About this protocol

Cite this protocol

Biskup, C., Rubio, I. (2014). Real-Time Visualization and Quantification of Native Ras Activation in Single Living Cells. In: Trabalzini, L., Retta, S. (eds) Ras Signaling. Methods in Molecular Biology, vol 1120. Humana Press, Totowa, NJ. https://doi.org/10.1007/978-1-62703-791-4_19

Download citation

  • DOI: https://doi.org/10.1007/978-1-62703-791-4_19

  • Published:

  • Publisher Name: Humana Press, Totowa, NJ

  • Print ISBN: 978-1-62703-790-7

  • Online ISBN: 978-1-62703-791-4

  • eBook Packages: Springer Protocols

Publish with us

Policies and ethics