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Yeast Two-Hybrid Screening to Test for Protein–Protein Interactions in the Auditory System

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Auditory and Vestibular Research

Part of the book series: Methods in Molecular Biology™ ((MIMB,volume 493))

Abstract

We describe a protocol to screen for protein-protein interactions using the Gal-4 based yeast two-hybrid system. In this protocol, we describe serial transformation of bait into an already constructed cDNA library in yeast AH109 cells. We find this method to gives the most number of true interactions. Where a pre-made library in yeast cells is not available, the method outlined can be quickly adapted. AH109 cells can be first transformed with bait containing a vector followed by selection of yeast containing the bait. A second transformation of yeast cells is then accomplished with the cDNA library. The method is quick and can lead to the discovery of significant interactions.

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References

  1. Brent, R. and Finley, R. L., Jr. (1997) Understanding gene and allele function with two-hybrid methods. Annu. Rev. Genet. 31, 663–704.

    Article  CAS  PubMed  Google Scholar 

  2. Bartel, P., Chien, C. T., Sternglanz, R., and Fields, S. (1993) Elimination of false positives that arise in using the two-hybrid system. Biotechniques 14(6), 920–924.

    CAS  PubMed  Google Scholar 

  3. Bartel, P. L., Chien, C.-T., Sternglanz, R., and Fields, S. (1993) Using the two-hybrid system to detect protein-protein interactions, in Cellular Interactions in Development: A Practical Approach (Hartley, D. A., ed.) Oxford University Press, Oxford pp. 153–179.

    Google Scholar 

  4. Chien, C. T., Bartel, P. L., Sternglanz, R., and Fields, S. (1991) The two-hybrid system: a method to identify and clone genes for proteins that interact with a protein of interest. Proc. Natl. Acad. Sci. U.S.A. 88, 9578–9582.

    Article  CAS  PubMed  Google Scholar 

  5. Fields, S. and Sternglanz, R. (1994) The two-hybrid system: an assay for protein-protein interactions. Trends Genet. 10, 286–292.

    Article  CAS  PubMed  Google Scholar 

  6. Fritz, C. C. and Green, M.R. (1992) Fishing for partners. Curr. Biol. 2, 403–405.

    Article  CAS  PubMed  Google Scholar 

  7. Golemis, E. A., Gyuris, J., and Brent, R. (1994) Interaction trap/two-hybrid systems to identify interacting proteins, in Current Protocols in Molecular Biology, John Wiley & Sons, Inc., Hoboken, NJ, Chapters 13 and 14.

    Google Scholar 

  8. Golemis, E. A., Gyuris, J., and Brent, R. (1996) Analysis of protein interactions; and Interaction trap/two-hybrid systems to identify interacting proteins, in Current Protocols in Molecular Biology, John Wiley & Sons, Inc., Hoboken, NJ, Chapters 20.0 and 20.1.

    Google Scholar 

  9. Guarente, L. (1993) Strategies for the identification of interacting proteins. Proc. Natl. Acad. Sci. U.S.A. 90(5), 1639–1641.

    Article  CAS  PubMed  Google Scholar 

  10. Gyuris, J., Golemis, E., Chertkov, H., and Brent, R. (1993) Cdi1, a human G1 and S phase protein phosphatase that associates with Cdk2. Cell 75, 791–803.

    Article  CAS  PubMed  Google Scholar 

  11. Johnsson, N. and Varshavsky, A. (1994) Split ubiquitin as a sensor of protein interactions in vivo. Proc. Natl. Acad. Sci. U.S.A. 91, 10340–10344.

    Article  CAS  PubMed  Google Scholar 

  12. Luban, J. and Goff, S. P. (1995) The yeast two-hybrid system for studying protein-protein interactions. Curr. Opin. Biotechnol. 6(1), 59–64.

    Article  CAS  PubMed  Google Scholar 

  13. Mendelsohn, A. R. and Brent, R. (1994) Applications of interaction traps/two-hybrid systems to biotechnology research. Curr. Opin. Biotechnol. 5(5), 482–486.

    Article  CAS  PubMed  Google Scholar 

  14. Stagljar I., Korostensky, C., Johnsson, N., te Heesen, S. A. (1998) genetic system based on split-ubiquitin for the analysis of interactions between membrane proteins in vivo. Proc. Natl. Acad. Sci. U.S.A. 95(9), 5187–5192.

    Article  CAS  PubMed  Google Scholar 

  15. Fields, S. and Song, O. A. (1989) novel genetic system to detect protein-protein interactions. Nature 340, 245–246.

    Article  CAS  PubMed  Google Scholar 

  16. Fields, S. (2005) High-throughput two-hybrid analysis. The promise and the peril. FEBS J. 272, 5391–5399.

    Article  CAS  PubMed  Google Scholar 

  17. Goll, J. and Uetz, P. (2006) The elusive yeast interactome. Genome Biol. 7(6), 223.

    PubMed  Google Scholar 

  18. Stelzl, U. and Wanker, E. E. (2006) The value of high quality protein-protein interaction networks for systems biology. Curr. Opin. Chem. Biol. 10(6), 551–558.

    Article  CAS  PubMed  Google Scholar 

  19. Suter, B., Auerbach, D., and Stagljar, I. (2006) Yeast-based functional genomics and proteomics technologies: the first 15 years and beyond. Biotechniques 40(5), 625–644.

    Article  CAS  PubMed  Google Scholar 

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Navaratnam, D.S. (2009). Yeast Two-Hybrid Screening to Test for Protein–Protein Interactions in the Auditory System. In: Sokolowski, B. (eds) Auditory and Vestibular Research. Methods in Molecular Biology™, vol 493. Humana Press. https://doi.org/10.1007/978-1-59745-523-7_15

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  • DOI: https://doi.org/10.1007/978-1-59745-523-7_15

  • Publisher Name: Humana Press

  • Print ISBN: 978-1-934115-62-6

  • Online ISBN: 978-1-59745-523-7

  • eBook Packages: Springer Protocols

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