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N-Linked Glycan Characterization of Heterologous Proteins

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Pichia Protocols

Part of the book series: Methods in Molecular Biology ((MIMB,volume 389))

Abstract

Our laboratory has focused on the re-engineered of the secretory pathway of Pichia pastoris to perform glycosylation reactions that mimic processing of N-glycans in humans and other higher mammals (1,2). A reporter protein with a single N-linked glycosylation site, a His-tagged Kringle 3 domain of human plasminogen (K3), was used to identify combinations of optimal leader/catalytic domain(s) to recreate human N-glycan processing in the Pichia system. In this chapter we describe detailed protocols for high-throughput purification of K3, enzymatic release of N-glycans, matrix-assisted laser desorption ionization time-of-flight and high-performance liquid chromatography analysis of the released N-glycans. The developed protocols can be adapted to the characterization of N-glycans from any purified protein expressed in P. pastoris.

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References

  1. Choi, B-K., Bobrowicz, P., Davidson, R. C., et al. (2003) Use of combinatorial genetic libraries to humanize N-Linked glycosylation in the yeast Pichia pastoris. Proc. Natl. Acad. Sci. USA 100, 5022–5027.

    Article  CAS  PubMed  Google Scholar 

  2. Hamilton, S. R., Bobrowicz, P., Bobrowicz, B., et al. (2003) Production of complex human glycoproteins in yeast. Science 301, 1244–1246.

    Article  CAS  PubMed  Google Scholar 

  3. Bretthauer, R. K. and Castellino F. J. (1999) Glycosylation of Pichia-derived proteins. Biotechnol. Appl. Biochem. 30, 193–200.

    CAS  PubMed  Google Scholar 

  4. Koji, M., Narutoshi, S., and Tomoyasu, R. (1996) Sugar chain-elongating protein and DNA derived from yeast Pichia genus. Jpn Patent JP 8336387.

    Google Scholar 

  5. Maras, M., De Bruyn A., Vervecken, W., et al. (1999) In vivo synthesis of complex N-glycans by expression of human N-acetylglucosaminyltransferase I in the filamentous fungus Trichoderma reesei. FEBS letters 452, 365–370.

    Article  CAS  PubMed  Google Scholar 

  6. Callewaert, N., Laroy, W., Cadirgi, H., et al. (2001) use of HDEL-tagged Trichoderma reesei mannosyl oligosaccharide 1,2-α-mannosidase for N-glycan engineering in Pichia pastoris. FEBS letters 503, 173–178.

    Article  CAS  PubMed  Google Scholar 

  7. Papac, D. I., Briggs, J. B., Chin E. T., and Jones A. J. S. (1998) A high-throughput microscale method to release N-linked oligosaccharides from glycopropteins for matrix-assisted laser desorption/ionization time-of flight mass spectrometric analysis. Glycobiology. 8, 445–454.

    Article  CAS  PubMed  Google Scholar 

  8. Bigge, J. C., Patel, T. P., Bruce, J. A., Goulding, P. N., Charles, S. M., and Parekh, R. B. (1995) Nonselective and efficient fluorescent labeling of glycans using 2-amino benzamide and anthranilic acid. Anal. Biochem. 230, 229–238.

    Article  CAS  PubMed  Google Scholar 

  9. Townsend, R. R., Lipniunas, P. H., Bigge, C., Ventom, A., and Parekh R. (1996) Multimode high-performance liquid chromatography of fluorescently labeled oligosaccharides from glycoproteins. Anal. Biochem. 239, 200–207.

    Article  CAS  PubMed  Google Scholar 

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© 2007 Humana Press Inc., Totowa, NJ

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Li, H., Miele, R.G., Mitchell, T.I., Gerngross, T.U. (2007). N-Linked Glycan Characterization of Heterologous Proteins. In: Cregg, J.M. (eds) Pichia Protocols. Methods in Molecular Biology, vol 389. Humana Press. https://doi.org/10.1007/978-1-59745-456-8_10

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  • DOI: https://doi.org/10.1007/978-1-59745-456-8_10

  • Publisher Name: Humana Press

  • Print ISBN: 978-1-58829-429-6

  • Online ISBN: 978-1-59745-456-8

  • eBook Packages: Springer Protocols

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