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Generation of FLIP and FLIP-FlpE Targeting Vectors for Biallelic Conditional and Reversible Gene Knockouts in Mouse and Human Cells

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Somatic Stem Cells

Part of the book series: Methods in Molecular Biology ((MIMB,volume 1842))

Abstract

Rapid generation of conditional knockout models in a diploid system is challenging. Recently, CRISPR-FLIP strategy has been introduced, which facilitates the generation of biallelic conditional or reversible gene knockouts in various mammalian cell lines including mouse and human pluripotent stem cells by codelivery of the CRISPR/Cas9 system and a universal intronic cassetteā€”FLIP and FLIP-FlpE. Here, I describe the design and cloning method of FLIP and FLIP-FlpE targeting vectors for conditional and reversible gene knockouts. This method is applicable to mouse embryonic stem cells, human induced pluripotent stem cells, and adult stem cell-derived organoids.

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Reference

  1. Andersson-Rolf A, Mustata RC, Merenda A et al (2017) One-step generation of conditional and reversible gene knockouts. Nat Methods 14(3):287ā€“289

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Acknowledgments

This protocol is adapted from Protocol Exchange (2017) doi:https://doi.org/10.1038/protex.2017.026. B.-K.K. is supported by a Sir Henry Dale Fellowship from the Wellcome Trust and the Royal Society (101241/Z/13/Z) and received a core support grant from the Wellcome Trust and MRC to the WTā€“MRC Cambridge Stem Cell Institute.

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Correspondence to Bon-Kyoung Koo .

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Koo, BK. (2018). Generation of FLIP and FLIP-FlpE Targeting Vectors for Biallelic Conditional and Reversible Gene Knockouts in Mouse and Human Cells. In: Singh, S., Rameshwar, P. (eds) Somatic Stem Cells. Methods in Molecular Biology, vol 1842. Humana Press, New York, NY. https://doi.org/10.1007/978-1-4939-8697-2_19

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  • DOI: https://doi.org/10.1007/978-1-4939-8697-2_19

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  • Publisher Name: Humana Press, New York, NY

  • Print ISBN: 978-1-4939-8696-5

  • Online ISBN: 978-1-4939-8697-2

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