Abstract
Pluripotent stem cells (PSCs) are the in vitro counterpart of the pluripotent epiblast of the mammalian embryo with the capacity to generate all cell types of the adult organism. During development, the three definitive germ layers are specified and simultaneously spatially organized. In contrast, differentiating PSCs tend to generate cell fates in a spatially disorganized manner. This has limited the in vitro study of specific cell–cell interactions and patterning mechanisms that occur in vivo. Here we describe a protocol to differentiate mouse PSCs in a spatially organized manner on micropatterned surfaces. Micropatterned chips comprise many colonies of uniform size and geometry facilitating a robust quantitative analysis of patterned fate specification. Furthermore, multiple factors may be simultaneously manipulated with temporal accuracy to probe the dynamic interactions regulating these processes. The micropattern system is scalable, providing a valuable tool to generate material for large-scale analysis and biochemical experiments that require substantial amounts of starting material, difficult to obtain from early embryos.
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References
Power MA, Tam PPL (1993) Onset of gastrulation, morphogenesis and somitogenesis in mouse embryos displaying compensatory growth. Anat Embryol 187(5):493–504. https://doi.org/10.1007/BF00174425
McDole K, Guignard L, Amat F, Berger A, Malandain G, Royer LA, Turaga SC, Branson K, Keller PJ (2018) In toto imaging and reconstruction of post-implantation mouse development at the single-cell level. Cell 175(3):859–876.e833. https://doi.org/10.1016/j.cell.2018.09.031
Turner DA, Baillie-Johnson P, Martinez Arias A (2016) Organoids and the genetically encoded self-assembly of embryonic stem cells. BioEssays 38(2):181–191. https://doi.org/10.1002/bies.201500111
Deglincerti A, Etoc F, Guerra MC, Martyn I, Metzger J, Ruzo A, Simunovic M, Yoney A, Brivanlou AH, Siggia E, Warmflash A (2016) Self-organization of human embryonic stem cells on micropatterns. Nat Protoc 11(11):2223–2232. https://doi.org/10.1038/nprot.2016.131
Etoc F, Metzger J, Ruzo A, Kirst C, Yoney A, Ozair MZ, Brivanlou AH, Siggia ED (2016) A balance between secreted inhibitors and edge sensing controls gastruloid self-organization. Dev Cell 39(3):302–315. https://doi.org/10.1016/j.devcel.2016.09.016
Tewary M, Ostblom J, Prochazka L, Zulueta-Coarasa T, Shakiba N, Fernandez-Gonzalez R, Zandstra PW (2017) A stepwise model of reaction-diffusion and positional information governs self-organized human peri-gastrulation-like patterning. Development 144(23):4298–4312. https://doi.org/10.1242/dev.149658
Warmflash A, Sorre B, Etoc F, Siggia ED, Brivanlou AH (2014) A method to recapitulate early embryonic spatial patterning in human embryonic stem cells. Nat Methods 11(8):847–854. https://doi.org/10.1038/nmeth.3016
Heemskerk I, Warmflash A (2016) Pluripotent stem cells as a model for embryonic patterning: from signaling dynamics to spatial organization in a dish. Dev Dynam 245(10):976–990. https://doi.org/10.1002/Dvdy.24432
Aach J, Lunshof J, Iyer E, Church GM (2017) Addressing the ethical issues raised by synthetic human entities with embryo-like features. elife 6:e20674. https://doi.org/10.7554/eLife.20674
Morgani SM, Metzger JJ, Nichols J, Siggia ED, Hadjantonakis AK (2018) Micropattern differentiation of mouse pluripotent stem cells recapitulates embryo regionalized cell fate patterning. elife 7:e32839. https://doi.org/10.7554/eLife.32839
Hayashi K, Ohta H, Kurimoto K, Aramaki S, Saitou M (2011) Reconstitution of the mouse germ cell specification pathway in culture by pluripotent stem cells. Cell 146(4):519–532. https://doi.org/10.1016/j.cell.2011.06.052
Hayashi K, Saitou M (2013) Stepwise differentiation from naive state pluripotent stem cells to functional primordial germ cells through an epiblast-like state. Methods Mol Biol 1074:175–183. https://doi.org/10.1007/978-1-62703-628-3_13
Arnold SJ, Stappert J, Bauer A, Kispert A, Herrmann BG, Kemler R (2000) Brachyury is a target gene of the Wnt/beta-catenin signaling pathway. Mech Develop 91(1–2):249–258. https://doi.org/10.1016/S0925-4773(99)00309-3
Kurek D, Neagu A, Tastemel M, Tuysuz N, Lehmann J, van de Werken HJG, Philipsen S, van der Linden R, Maas A, van IJcken WFJ, Drukker M, ten Berge D (2015) Endogenous WNT signals mediate BMP-induced and spontaneous differentiation of epiblast stem cells and human embryonic stem cells. Stem Cell Report 4(1):114–128. https://doi.org/10.1016/j.stemcr.2014.11.007
Sumi T, Oki S, Kitajima K, Meno C (2013) Epiblast ground state is controlled by canonical Wnt/beta-catenin signaling in the postimplantation mouse embryo and epiblast stem cells. PLoS One 8(5):e63378. https://doi.org/10.1371/journal.pone.0063378
Wu J, Okamura D, Li M, Suzuki K, Luo CY, Ma L, He YP, Li ZW, Benner C, Tamura I, Krause MN, Nery JR, Du TT, Zhang ZZ, Hishida T, Takahashi Y, Aizawa E, Kim NY, Lajara J, Guillen P, Campistol JM, Esteban CR, Ross PJ, Saghatelian A, Ren B, Ecker JR, Belmonte JCI (2015) An alternative pluripotent state confers interspecies chimaeric competency. Nature 521(7552):316. https://doi.org/10.1038/nature14413
Ohgushi M, Matsumura M, Eiraku M, Murakami K, Aramaki T, Nishiyama A, Muguruma K, Nakano T, Suga H, Ueno M, Ishizaki T, Suemori H, Narumiya S, Niwa H, Sasai Y (2010) Molecular pathway and cell state responsible for dissociation-induced apoptosis in human pluripotent stem cells. Cell Stem Cell 7(2):225–239. https://doi.org/10.1016/j.stem.2010.06.018
Watanabe K, Ueno M, Kamiya D, Nishiyama A, Matsumura M, Wataya T, Takahashi JB, Nishikawa S, Nishikawa S, Muguruma K, Sasai Y (2007) A ROCK inhibitor permits survival of dissociated human embryonic stem cells. Nat Biotechnol 25(6):681–686. https://doi.org/10.1038/nbt1310
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Morgani, S.M., Hadjantonakis, AK. (2021). Spatially Organized Differentiation of Mouse Pluripotent Stem Cells on Micropatterned Surfaces. In: Ancelin, K., Borensztein, M. (eds) Epigenetic Reprogramming During Mouse Embryogenesis. Methods in Molecular Biology, vol 2214. Humana, New York, NY. https://doi.org/10.1007/978-1-0716-0958-3_4
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DOI: https://doi.org/10.1007/978-1-0716-0958-3_4
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