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Genomics of Olfactory Receptors

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Chemosensory Systems in Mammals, Fishes, and Insects

Part of the book series: Results and Problems in Cell Differentiation ((RESULTS,volume 47))

Abstract

In many species, the sense of smell plays important roles in locating food, detecting predators, navigating, and communicating social information. The olfactory system has evolved complex repertoires of odor receptors (ORs) to fulfill these functions. Through computational data mining, OR repertoires of multiple species were identified, revealing a surprisingly large OR gene family in rodents and evolutionary fluctuation among different organisms. Characteristics of OR genes were explored through computational and experimental methods, showing a complicated gene structure and special genomic distribution. Utilizing high-throughput OR microarrays, expression profiles of the mouse and human OR repertoire were examined, their olfactory functions verified, and their zonal, ectopic and developmental expression determined. Variation in human smelling abilities results from different functional OR repertoires, variable expressional levels and polymorphisms in the copy number of the OR genes. These genomic approaches have both provided new data and generated new questions.

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References

  • Aloni R, Olender T, (2006) Ancient genomic architecture for mammalian olfactory receptor clusters. Genome Biol 7(10):R88

    Article  PubMed  Google Scholar 

  • Bargmann CI (1998) Neurobiology of the Caenorhabditis elegans genome. Science 282(5396):2028–2033

    Article  PubMed  CAS  Google Scholar 

  • Buck L, Axel R (1991) A novel multigene family may encode odorant receptors: a molecular basis for odor recognition. Cell 65(1):175–187

    Article  PubMed  CAS  Google Scholar 

  • Chess A, Simon I, (1994) Allelic inactivation regulates olfactory receptor gene expression. Cell 78(5):823–834

    Article  PubMed  CAS  Google Scholar 

  • Drutel G, Arrang JM, (1995) Cloning of OL1, a putative olfactory receptor and its expression in the developing rat heart. Receptors Channels 3(1):33–40

    PubMed  CAS  Google Scholar 

  • Feldmesser E, Olender T, (2006) Widespread ectopic expression of olfactory receptor genes. BMC Genom 7:121

    Article  Google Scholar 

  • Fuss SH, Omura M, (2007) Local and cis effects of the H element on expression of odorant receptor genes in mouse. Cell 130(2):373–384

    Article  PubMed  CAS  Google Scholar 

  • Gilad Y, Przeworski M, (2004) Loss of olfactory receptor genes coincides with the acquisition of full trichromatic vision in primates. PLoS Biol 2(1):E5

    Article  PubMed  Google Scholar 

  • Gilad Y, Man O, (2005) A comparison of the human and chimpanzee olfactory receptor gene repertoires. Genome Res 15(2):224–230

    Article  PubMed  CAS  Google Scholar 

  • Glusman G, Yanai I, (2001) The complete human olfactory subgenome. Genome Res 11(5):685–702

    Article  PubMed  CAS  Google Scholar 

  • Hill CA, Fox AN, (2002) G protein-coupled receptors in Anopheles gambiae. Science 298(5591):176–178

    Article  PubMed  CAS  Google Scholar 

  • Liu AH, Zhang X, (2003) Motif-based construction of a functional map for mammalian olfactory receptors. Genomics 81(5):443–456

    Article  PubMed  CAS  Google Scholar 

  • Lomvardas S, Barnea G, (2006) Interchromosomal interactions and olfactory receptor choice. Cell 126(2):403–413

    Article  PubMed  CAS  Google Scholar 

  • Menashe I, Man O, (2003) Different noses for different people. Nat Genet 34(2):143–4

    Article  PubMed  CAS  Google Scholar 

  • Mombaerts P (2004) Odorant receptor gene choice in olfactory sensory neurons: the one receptor-one neuron hypothesis revisited. Curr Opin Neurobiol 14(1):31–36

    Article  PubMed  CAS  Google Scholar 

  • Niimura Y, Nei M (2005) Evolutionary dynamics of olfactory receptor genes in fishes and tetrapods. Proc Natl Acad Sci U S A 102(17):6039–6044

    Article  PubMed  CAS  Google Scholar 

  • Olender T, Fuchs T, (2004) The canine olfactory subgenome. Genomics 83(3):361–372

    Article  PubMed  CAS  Google Scholar 

  • Pilpel Y, Lancet D (1999) The variable and conserved interfaces of modeled olfactory receptor proteins. Protein Sci 8(5):969–977

    Article  PubMed  CAS  Google Scholar 

  • Qasba P, Reed RR (1998) Tissue and zonal-specific expression of an olfactory receptor transgene. J Neurosci 18(1):227–236

    PubMed  CAS  Google Scholar 

  • Robertson HM, Warr CG, (2003) Molecular evolution of the insect chemoreceptor gene superfamily in Drosophila melanogaster. Proc Natl Acad Sci U S A 100(Suppl 2):14537–14542

    Article  PubMed  CAS  Google Scholar 

  • Serizawa S, Miyamichi K, (2003) Negative feedback regulation ensures the one receptor-one olfactory neuron rule in mouse. Science 302(5653):2088–2094

    Article  PubMed  CAS  Google Scholar 

  • Sosinsky A, Glusman G, (2000) The genomic structure of human olfactory receptor genes. Genomics 70(1):49–61

    Article  PubMed  CAS  Google Scholar 

  • Spehr M, Gisselmann G, (2003) Identification of a testicular odorant receptor mediating human sperm chemotaxis. Science 299(5615):2054–2058

    Article  PubMed  CAS  Google Scholar 

  • Spehr M, Schwane K, (2004) Dual capacity of a human olfactory receptor. Curr Biol 14(19):R832–R833

    Article  PubMed  CAS  Google Scholar 

  • Sullivan SL, Bohm S, (1995) Target-independent pattern specification in the olfactory epithelium. Neuron 15(4):779–789

    Article  PubMed  CAS  Google Scholar 

  • Young JM, Trask BJ (2002) The sense of smell: genomics of vertebrate odorant receptors. Hum Mol Genet 11(10):1153–1160

    Article  PubMed  CAS  Google Scholar 

  • Young JM, Friedman C, (2002) Different evolutionary processes shaped the mouse and human olfactory receptor gene families. Hum Mol Genet 11(5):535–546

    Article  PubMed  CAS  Google Scholar 

  • Young JM, Shykind BM, (2003) Odorant receptor expressed sequence tags demonstrate olfactory expression of over 400 genes, extensive alternate splicing and unequal expression levels. Genome Biol 4(11):R71

    Article  PubMed  Google Scholar 

  • Young JM, Endicott RM, (2008) Extensive copy-number variation of the human olfactory receptor gene family. Am J Hum Genet 83(2):228–242

    Article  PubMed  CAS  Google Scholar 

  • Yuan TT, Toy P, (2001) Cloning and genetic characterization of an evolutionarily conserved human olfactory receptor that is differentially expressed across species. Gene 278(1–2):41–51

    Article  PubMed  CAS  Google Scholar 

  • Zhang X, Firestein S (2002) The olfactory receptor gene superfamily of the mouse. Nat Neurosci 5(2):124–133

    PubMed  CAS  Google Scholar 

  • Zhang X, Rodriguez I, (2004a) Odorant and vomeronasal receptor genes in two mouse genome assemblies. Genomics 83(5):802–811

    Article  CAS  Google Scholar 

  • Zhang X, Rogers M, (2004b) High-throughput microarray detection of olfactory receptor gene expression in the mouse. Proc Natl Acad Sci U S A 101(39):14168–14173

    Article  CAS  Google Scholar 

  • Zhang X, Zhang X, (2007a) Comparative genomics of odorant and pheromone receptor genes in rodents. Genomics 89(4):441–450

    Article  CAS  Google Scholar 

  • Zhang X, De la Cruz O, (2007b) Characterizing the expression of the human olfactory receptor gene family using a novel DNA microarray. Genome Biol 8(5):R86

    Article  Google Scholar 

  • Zhang X, Macucci F, Greer C, Firestein SJ (2008) High-throughput microarray expression of olfactory receptors in rodents. In press

    Google Scholar 

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Zhang*, X., Firestein, S. (2009). Genomics of Olfactory Receptors. In: Korsching, S., Meyerhof, W. (eds) Chemosensory Systems in Mammals, Fishes, and Insects. Results and Problems in Cell Differentiation, vol 47. Springer, Berlin, Heidelberg. https://doi.org/10.1007/400_2008_28

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