Skip to main content

Screening for Novel Enzymes

  • Chapter
  • First Online:
Biocatalysis - From Discovery to Application

Part of the book series: Topics in Current Chemistry ((4143,volume 200))

Abstract

The development of new biocatalysts as synthetic tools for chemists has been expanding rapidly over the last several years. It is now possible either to discover or engineer enzymes with unique substrate specificities and selectivities that are stable and robust for organic synthesis applications. This has been made possible by the application of the newest screening and selection technologies that allow rapid identification of enzyme activities from diverse sources.We focus on how to recognize and tackle important issues during the strategic design and implementation of screening for novel enzymes. We also review the approaches available for biocatalyst discovery and relate them to the isolation of thermostable enantioselective esterases and alcohol dehydrogenases for the purpose of illustration and discussion.

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

eBook
USD 16.99
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD 16.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

Preview

Unable to display preview. Download preview PDF.

Unable to display preview. Download preview PDF.

References

  1. Schoffers E, Golebiowski A, Johnson CR (1996) Tetrahedron 52:3769

    Article  CAS  Google Scholar 

  2. Crabb WD, Mitchinson C (1997) Trends Biotechnol 15:349

    Article  CAS  Google Scholar 

  3. Gerhartz W (1990) Enzymes in industry. VCH, Weinheim

    Google Scholar 

  4. Wong C-H, Whitesides GM (1994) Enzymes in synthetic organic chemistry. Pergamon, Oxford

    Google Scholar 

  5. Santaniello E, Ferraboschi P, Grisenti P, Manzocchi A (1992) Chem Rev 92:1071

    Article  CAS  Google Scholar 

  6. Zaks A, Dodds DR (1997) Drug Discovery Today 2:513

    Article  CAS  Google Scholar 

  7. Shimizu S, Ogawa J, Kataoka M, Kobayashi M (1997) Adv Biochem Eng Biotechnol 58:45

    CAS  Google Scholar 

  8. Turner MK (1995) Trends Biotechnol 13:173

    Article  CAS  Google Scholar 

  9. Schwardt E (1990) Food Biotechnol 4:337

    Article  CAS  Google Scholar 

  10. Roberts S (1997) Preparative biotransformations. Wiley, Chichester

    Google Scholar 

  11. Arnold FH, Moore JC (1997) Adv Biochem Eng Biotechnol 58:1

    CAS  Google Scholar 

  12. Owusu RK, Cowan DA (1990) Enzyme Microb Technol 12:374

    Article  CAS  Google Scholar 

  13. Liao HH (1993) Enzyme Microb Technol 15:286

    Article  CAS  Google Scholar 

  14. Tosa T, Shibatani T (1995) Ann N Y Acad Sci 750:364

    Article  CAS  Google Scholar 

  15. Mazid MA (1993) Bio-Technology 11:690

    Google Scholar 

  16. St Clair NL, Navia MA (1992) J Am Chem Soc 114:7314

    Article  CAS  Google Scholar 

  17. Kuchner O, Arnold FH (1997) Trends Biotechnol 15:523

    Article  CAS  Google Scholar 

  18. Annual Product Guide Issue (1998) Nature Biotechnol 15:1107

    Google Scholar 

  19. Short JM (1997) Nature Biotechnol 15:1322

    Article  CAS  Google Scholar 

  20. Lalonde J (1997) Chemtech 27:38

    CAS  Google Scholar 

  21. Dalboge H, Lange L (1998) Trends Biotechnol 16:265

    Article  CAS  Google Scholar 

  22. Hummel W (1997) Exs 80:49

    CAS  Google Scholar 

  23. Chartrain M, Armstrong J, Katz L, King S, Reddy J, Shi YJ, Tschaen D, Greasham R (1996) Ann N Y Acad Sci 799:612

    Article  CAS  Google Scholar 

  24. (1984) ATCC media handbook. American Type Culture Collection, Rockville, MD

    Google Scholar 

  25. Bergey DH, Holt JG (1993) Bergey’s manual of determinative bacteriology. Williams & Wilkins, Baltimore

    Google Scholar 

  26. Giovannoni SJ, DeLong EF, Olsen GJ, Pace NR (1988) J Bacteriol 170:720

    CAS  Google Scholar 

  27. Busse HJ, Denner EBM, Lubitz W (1996) J Biotechnol 47:3

    Article  CAS  Google Scholar 

  28. Sambrook J, Maniatis T, Fritsch EF (1989) Molecular cloning: a laboratory manual. Cold Spring Harbor Laboratory, Cold Spring Harbor, NY

    Google Scholar 

  29. Amann R, Ludwig W, Schliefer K-H (1995) Microbiol Rev 59:143

    CAS  Google Scholar 

  30. Fastrez J (1997) Mol Biotechnol 7:37

    Article  CAS  Google Scholar 

  31. Vonstein V, Johnson SP, Yu H, Casadaban MJ, Pagratis NC, Weber JM, Demirjian DC (1995) J Bacteriol 177:4540

    CAS  Google Scholar 

  32. LaRossa RA (1996) In: Neidhart FC, Curtiss III R, Ingraham JL, Lin ECC, Low KB, Magasanik B, Reznikoff WS, Riley M, Schaechter M, Umbarger HE (eds) Escherichia coli and Salmonella, vol 2. ASM Press, Washington, DC, p 2527

    Google Scholar 

  33. Michal G, Möllering H, Siedel J (1983) In: Bergmeyer HU (ed) Methods of enzymatic analysis, vol I. Verlag Chemie, Weinheim p 197

    Google Scholar 

  34. Alvarez AM, Ibanez M, Rotger R (1993) Biotechniques 15:974

    CAS  Google Scholar 

  35. Houston JG, Banks M (1997) Curr Opin Biotechnol 8:734

    Article  CAS  Google Scholar 

  36. Cheng J, Sheldon EL, Wu L, Uribe A, Gerrue LO, Carrino J, Heller MJ, Oconnell JP (1998) Nature Biotechnol 16:541

    Article  CAS  Google Scholar 

  37. Hadd AG, Raymond DE, Halliwell JW, Jacobson SC, Ramsey JM (1997) Anal Chem 69:3407

    Article  CAS  Google Scholar 

  38. Jones P, Watson A, Davies M, Stubbings S (1992) Nucl Acids Res 20:4599

    Article  CAS  Google Scholar 

  39. Sheppard PO, Grant FJ, Oort PJ, Sprecher CA, Foster DC, Hagen FS, Upshall A, McKnight GL, O’Hara PJ (1994) Gene 150:163

    Article  CAS  Google Scholar 

  40. Madden TL, Tatusov RL, Zhang J (1996) Methods Enzymol 266:131

    Article  CAS  Google Scholar 

  41. Koonin EV, Tatusov RL, Rudd KE (1996) Methods Enzymol 266:295

    Article  CAS  Google Scholar 

  42. Tatusov RL, Koonin EV, Lipman DJ (1997) Science 278:631

    Article  CAS  Google Scholar 

  43. Gaasterland T, Sensen CW (1996) Biochimie 78:302

    Article  CAS  Google Scholar 

  44. Dsouza M, Larsen N, Overbeek R (1997) Trends Genet 13:497

    Article  CAS  Google Scholar 

  45. Govardhan CP, Margolin AL (1995) Chem Ind 17:689

    Google Scholar 

  46. Weber JM, Johnson SP, Vonstein V, Casadaban MJ, Demirjian DC (1995) Biotechnology (NY) 13:271

    Article  CAS  Google Scholar 

  47. Casadaban MJ, Martinez-Arias A, Shapira SK, Chou J (1983) Methods Enzymol 100:293

    Article  CAS  Google Scholar 

  48. Casadaban MJ, Chou J, Cohen SN (1980) J Bacteriol 143:971

    CAS  Google Scholar 

  49. Miller JH (1991) A short course in bacterial genetics: a laboratory manual and handbook for Escherichia coli and related bacteria. Cold Spring Harbor Laboratories Press, Cold Spring Harbor

    Google Scholar 

  50. Kwaan HC, Friedman RB, Szczecinski M (1978) Thromb Res 13:5

    Article  CAS  Google Scholar 

  51. Hron WT, Menahan LA (1981) J Lipid Res 22:377

    CAS  Google Scholar 

  52. Bowyer DE, Cridland JS, King JP (1979) J Lipid Res 19:274

    Google Scholar 

  53. Ulitzer S, Heller M (1981) Methods Enzymol 72:338

    Article  Google Scholar 

  54. Bjokhem I, Arner P, Thore A, Ostman J (1981) J Lipid Res 22:1142

    Google Scholar 

  55. Mizuno K, Toyosato M, Yabumoto S, Tauimizu I, Hirakawa H (1980) Anal Biochem 108:6

    Article  CAS  Google Scholar 

  56. Sowerby JM, Ottaway JH (1961) Biochem J 79:21P

    CAS  Google Scholar 

  57. Conway T, Sewell GW, Osman YA, Ingram LO (1987) J Bacteriol 169:2591

    CAS  Google Scholar 

  58. Skursky L, KovĂ¡r J, Stachova M (1979) Anal Biochem 99:65

    Article  CAS  Google Scholar 

  59. Quiros M, Sanchez VM, Brieva R, Rebolledo F, Gotor V (1993) Tetrahedron Asymmetry 4:1105

    Article  CAS  Google Scholar 

  60. Gotor V, Brieva R, GonzĂ¡lez C, Rebolledo F (1991) Tetrahedron 47:9207

    Article  CAS  Google Scholar 

  61. Chen C-H, Fujimoto Y, Girdaukas G, Sih CJ (1982) J Am Chem Soc 104:104

    Google Scholar 

  62. Stecher H, Faber K (1997) Synthesis 1

    Google Scholar 

  63. Janes L, Löwendhal C, Kazlauskas R (1998) Eur J Chem (1998) 4:2317

    Article  Google Scholar 

  64. Whittaker RG, Manthey MK, LeBrocque DS, Hayes PJ (1994) Anal Biochem 220:238

    Article  CAS  Google Scholar 

  65. Bornscheuer UT, Enzelberger MM, Altenbuchner J, Meyer HH (1998) Stratagene Tech Bull 11:16

    Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 1999 Springer Verlag Berlin Heidelberg

About this chapter

Cite this chapter

Demirjian, D.C., Shah, P.C., MorĂ­s-Varas, F. (1999). Screening for Novel Enzymes. In: Fessner, WD., et al. Biocatalysis - From Discovery to Application. Topics in Current Chemistry, vol 200. Springer, Berlin, Heidelberg. https://doi.org/10.1007/3-540-68116-7_1

Download citation

  • DOI: https://doi.org/10.1007/3-540-68116-7_1

  • Published:

  • Publisher Name: Springer, Berlin, Heidelberg

  • Print ISBN: 978-3-540-64942-7

  • Online ISBN: 978-3-540-68116-8

  • eBook Packages: Springer Book Archive

Publish with us

Policies and ethics