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Approximating the 2-Interval Pattern Problem

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Algorithms – ESA 2005 (ESA 2005)

Part of the book series: Lecture Notes in Computer Science ((LNTCS,volume 3669))

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Abstract

We address the problem of approximating the 2-Interval Pattern problem over its various models and restrictions. This problem, which is motivated by RNA secondary structure prediction, asks to find a maximum cardinality subset of a 2-interval set with respect to some prespecified model. For each such model, we give varying approximation quality depending on the different possible restrictions imposed on the input 2-interval set.

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© 2005 Springer-Verlag Berlin Heidelberg

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Crochemore, M., Hermelin, D., Landau, G.M., Vialette, S. (2005). Approximating the 2-Interval Pattern Problem. In: Brodal, G.S., Leonardi, S. (eds) Algorithms – ESA 2005. ESA 2005. Lecture Notes in Computer Science, vol 3669. Springer, Berlin, Heidelberg. https://doi.org/10.1007/11561071_39

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  • DOI: https://doi.org/10.1007/11561071_39

  • Publisher Name: Springer, Berlin, Heidelberg

  • Print ISBN: 978-3-540-29118-3

  • Online ISBN: 978-3-540-31951-1

  • eBook Packages: Computer ScienceComputer Science (R0)

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