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Building a High-Density Genetic Map Using the AFLP Technology

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Arabidopsis Protocols

Part of the book series: Methods in Molecular Biology™ ((MIMB,volume 82))

Abstract

The AFLP (Keygene, Wageningen, The Netherlands) technology allows the simultaneous amplification of many restriction fragments in a single polymerase chain reaction (PCR). Thus, the technology can be used to very efficiently detect restriction fragment polymorphisms. As an example of the vast numbers of markers that can be detected, the author describes here a protocol to construct a high-density genetic map mArabldopsis. The map may be used to identify primer combinations that will target fragments mapped to a specific area of the genome.

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References

  1. Vos, P., Hogers, R., Bleeker, M., Reijans, M., Van der Lee, T., Hornes, M, Frijters, A, Pot, J., Peleman, J, Kutper, M, and Zabeau, M (1995) AFLP. a new technique for DNA fingerprmtmg NucZ Acids Res 23, 4407–4414

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  3. Stam, P. and Van OotJen, J W. (1995) JoinMap version 2.0. software for the calculation of genetic linkage maps CPR and DLO, Wageningen

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  4. Stam, P. (1993) Constructton of integrated genetic linkage maps by means of a new computer package. JomMap. Plant J. 3, 739–744

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© 1998 Human press Inc, Totowa, NJ

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Kuiper, M.T.R. (1998). Building a High-Density Genetic Map Using the AFLP Technology. In: Martinez-Zapater, J.M., Salinas, J. (eds) Arabidopsis Protocols. Methods in Molecular Biology™, vol 82. Humana Press. https://doi.org/10.1385/0-89603-391-0:157

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  • DOI: https://doi.org/10.1385/0-89603-391-0:157

  • Publisher Name: Humana Press

  • Print ISBN: 978-0-89603-391-7

  • Online ISBN: 978-1-59259-268-5

  • eBook Packages: Springer Protocols

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